Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01584 ATGGGCTGCGTTTTCGGCAGACATGCGGGTGCAGATCGGCGGAGTCATTCTCGAGCTCGGAACAGTCGCCGGAGTGTCAAAGAGCCTCCGGCTGCTGACAGAGTTGTTGATGAGAGGGCTGAGAAGGAGCTGGTACAGATAGAGAAGCCGAAGGATCGAAAAGCTGCGGATTTCGCTGCTGCAGAGCGCCGAAAACTCAGGCTGGATGCGAGCCTGAAAAATGAGCAAGGATGGCCGACGTGGCTGTTGGCGGTCGCCGGAGATGTGATCCAAGGTTGGGCCCCTCGCCGAGCCAATACGTTCGAGAAGCTGGCTAAGATTGGGCAAGGAACTTACAGCAATGTGTACAAAGCAAGAGATCTACTCACCGGAAAAATCGTGGCTTTGAAGAAGGTTAGGTTCGATAATTTAGAGCCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTCTTAGACGACTCGATCATCCAAATGTGGTTAAGCTTGAAGGATTGGTAACTTCCAGAATGTCTTGTAGTCTTTACTTAGTTTTCGAGTATATGGAGCACGATCTCGCCGGCCTAGCCGCTTGCCAAGCGGTCAAATTTTCCGAGCCTCAGGTGAAATGCTATATGAAGCAACTTCTTTCGGGGCTCGAGCATTGCCATAGTCGAGGTGTCTTGCATCGCGATATTAAGGGTTCCAATCTTCTGATTAATAACGAAGGAATTCTGAAAATAGCTGATTTTGGGCTGGCTACGTTTTACGATCAGCACCATAAGCAGGCAATGACTAGTCGAGTTGTCACCCTTTGGTATCGCCCCCCCGAACTACTCCTCGGGGCTACCTTCTATGGTGCTGGTGTTGACCTTTGGAGTGCAGGCTGCATCCTAGCAGAGCTGCTGGATGGGAAACCAATAATGCCAGGAAGAACAGAGGTTGAACAACTTCACAAGATATTTAAGTTATGTGGCTCTCCATCCGATGAATATTGGAAGAAGCATAAACTGCCCAATGCGACCCTGTTTAAGCCACAGCAACCATACAAACGAAGCGTGGCCGAAACTTTCAAGGATTTCCCCTCATCTTCTTTACCTCTCGTCGACGCTCTTCTTTCGACAGATCCTGACGATCGGGGCAGTGCCACACATGCATTGAATAGCGAATTTTTTAACTCCGAGCCTCAAGCTTGTGAACCTTCGAGTCTACCGAAGTATCCTCCAAGCAAGGAAATGGACGCAAAGTTGAGAGACGAAGAAGCAAAACGGCAAAGGGGTCTAAACGGGAAAGCTAGTGCTGTCGATGGTGTCCGGAAGGTGAGAATTCGTGATAGAGTTAGTAAGGCCATTCCAGCTCCGGAGGCAAATGCCGAAATTCAAGCAAACTTATATAGGTGGAGGCAAGAGAAGGAAAGAGCAATGGTTCAAGAGATGGTGGCAAAACTTACAAGTGTTTGCTGGGACAAATGCATCACAGGTGCGCCAGGTAGCAAGTTCAGCTCCAGTGAATCAAGCTGCCTTTCCAACTGCGCTCAGCGTTACATGGACATGAGCCTCCTCATTGTCAAACGATTTCAGAACATGCAATGA 1572 49.05 MGCVFGRHAGADRRSHSRARNSRRSVKEPPAADRVVDERAEKELVQIEKPKDRKAADFAAAERRKLRLDASLKNEQGWPTWLLAVAGDVIQGWAPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAACQAVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLINNEGILKIADFGLATFYDQHHKQAMTSRVVTLWYRPPELLLGATFYGAGVDLWSAGCILAELLDGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKHKLPNATLFKPQQPYKRSVAETFKDFPSSSLPLVDALLSTDPDDRGSATHALNSEFFNSEPQACEPSSLPKYPPSKEMDAKLRDEEAKRQRGLNGKASAVDGVRKVRIRDRVSKAIPAPEANAEIQANLYRWRQEKERAMVQEMVAKLTSVCWDKCITGAPGSKFSSSESSCLSNCAQRYMDMSLLIVKRFQNMQ 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49137799 49149137 + Bda008456.1 Bda11g01584 16692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01584 523 MobiDBLite consensus disorder prediction 387 424 - -
Bda11g01584 523 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Bda11g01584 523 MobiDBLite consensus disorder prediction 404 420 - -
Bda11g01584 523 ProSiteProfiles Protein kinase domain profile. 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01584 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Bda11g01584 523 Gene3D Transferase(Phosphotransferase) domain 1 184 424 - -
Bda11g01584 523 CDD STKc_CDK9_like 101 385 - -
Bda11g01584 523 MobiDBLite consensus disorder prediction 1 40 - -
Bda11g01584 523 SUPERFAMILY Protein kinase-like (PK-like) 95 389 IPR011009 -
Bda11g01584 523 SUPERFAMILY Tim10-like 466 523 IPR035427 -
Bda11g01584 523 Gene3D Phosphorylase Kinase; domain 1 88 183 - -
Bda11g01584 523 SMART serkin_6 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01584 523 Pfam Tim10/DDP family zinc finger 461 521 IPR004217 -
Bda11g01584 523 PANTHER CELL DIVISION PROTEIN KINASE 50 464 - -
Bda11g01584 523 MobiDBLite consensus disorder prediction 9 40 - -
Bda11g01584 523 Pfam Protein kinase domain 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01584 523 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 446 523 IPR035427 -
Bda11g01584 523 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 50 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01030 Bda-Chr8:21356620 Bda11g01584 Bda-Chr11:49137799 0 dispersed
Bda11g01584 Bda-Chr11:49137799 Bda14g00861 Bda-Chr14:6618208 1.44E-179 dispersed
Bda11g01584 Bda-Chr11:49137799 Bda13g00161 Bda-Chr13:2092316 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69945 PF00069 Pkinase 1.70E-68 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01584 K08819 - zju:107404513 736.102