Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01584 | ATGGGCTGCGTTTTCGGCAGACATGCGGGTGCAGATCGGCGGAGTCATTCTCGAGCTCGGAACAGTCGCCGGAGTGTCAAAGAGCCTCCGGCTGCTGACAGAGTTGTTGATGAGAGGGCTGAGAAGGAGCTGGTACAGATAGAGAAGCCGAAGGATCGAAAAGCTGCGGATTTCGCTGCTGCAGAGCGCCGAAAACTCAGGCTGGATGCGAGCCTGAAAAATGAGCAAGGATGGCCGACGTGGCTGTTGGCGGTCGCCGGAGATGTGATCCAAGGTTGGGCCCCTCGCCGAGCCAATACGTTCGAGAAGCTGGCTAAGATTGGGCAAGGAACTTACAGCAATGTGTACAAAGCAAGAGATCTACTCACCGGAAAAATCGTGGCTTTGAAGAAGGTTAGGTTCGATAATTTAGAGCCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTCTTAGACGACTCGATCATCCAAATGTGGTTAAGCTTGAAGGATTGGTAACTTCCAGAATGTCTTGTAGTCTTTACTTAGTTTTCGAGTATATGGAGCACGATCTCGCCGGCCTAGCCGCTTGCCAAGCGGTCAAATTTTCCGAGCCTCAGGTGAAATGCTATATGAAGCAACTTCTTTCGGGGCTCGAGCATTGCCATAGTCGAGGTGTCTTGCATCGCGATATTAAGGGTTCCAATCTTCTGATTAATAACGAAGGAATTCTGAAAATAGCTGATTTTGGGCTGGCTACGTTTTACGATCAGCACCATAAGCAGGCAATGACTAGTCGAGTTGTCACCCTTTGGTATCGCCCCCCCGAACTACTCCTCGGGGCTACCTTCTATGGTGCTGGTGTTGACCTTTGGAGTGCAGGCTGCATCCTAGCAGAGCTGCTGGATGGGAAACCAATAATGCCAGGAAGAACAGAGGTTGAACAACTTCACAAGATATTTAAGTTATGTGGCTCTCCATCCGATGAATATTGGAAGAAGCATAAACTGCCCAATGCGACCCTGTTTAAGCCACAGCAACCATACAAACGAAGCGTGGCCGAAACTTTCAAGGATTTCCCCTCATCTTCTTTACCTCTCGTCGACGCTCTTCTTTCGACAGATCCTGACGATCGGGGCAGTGCCACACATGCATTGAATAGCGAATTTTTTAACTCCGAGCCTCAAGCTTGTGAACCTTCGAGTCTACCGAAGTATCCTCCAAGCAAGGAAATGGACGCAAAGTTGAGAGACGAAGAAGCAAAACGGCAAAGGGGTCTAAACGGGAAAGCTAGTGCTGTCGATGGTGTCCGGAAGGTGAGAATTCGTGATAGAGTTAGTAAGGCCATTCCAGCTCCGGAGGCAAATGCCGAAATTCAAGCAAACTTATATAGGTGGAGGCAAGAGAAGGAAAGAGCAATGGTTCAAGAGATGGTGGCAAAACTTACAAGTGTTTGCTGGGACAAATGCATCACAGGTGCGCCAGGTAGCAAGTTCAGCTCCAGTGAATCAAGCTGCCTTTCCAACTGCGCTCAGCGTTACATGGACATGAGCCTCCTCATTGTCAAACGATTTCAGAACATGCAATGA | 1572 | 49.05 | MGCVFGRHAGADRRSHSRARNSRRSVKEPPAADRVVDERAEKELVQIEKPKDRKAADFAAAERRKLRLDASLKNEQGWPTWLLAVAGDVIQGWAPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAACQAVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLINNEGILKIADFGLATFYDQHHKQAMTSRVVTLWYRPPELLLGATFYGAGVDLWSAGCILAELLDGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKHKLPNATLFKPQQPYKRSVAETFKDFPSSSLPLVDALLSTDPDDRGSATHALNSEFFNSEPQACEPSSLPKYPPSKEMDAKLRDEEAKRQRGLNGKASAVDGVRKVRIRDRVSKAIPAPEANAEIQANLYRWRQEKERAMVQEMVAKLTSVCWDKCITGAPGSKFSSSESSCLSNCAQRYMDMSLLIVKRFQNMQ | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 49137799 | 49149137 | + | Bda008456.1 | Bda11g01584 | 16692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01584 | 523 | MobiDBLite | consensus disorder prediction | 387 | 424 | - | - | |
Bda11g01584 | 523 | ProSitePatterns | Protein kinases ATP-binding region signature. | 107 | 130 | IPR017441 | GO:0005524 | |
Bda11g01584 | 523 | MobiDBLite | consensus disorder prediction | 404 | 420 | - | - | |
Bda11g01584 | 523 | ProSiteProfiles | Protein kinase domain profile. | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01584 | 523 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 221 | 233 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01584 | 523 | Gene3D | Transferase(Phosphotransferase) domain 1 | 184 | 424 | - | - | |
Bda11g01584 | 523 | CDD | STKc_CDK9_like | 101 | 385 | - | - | |
Bda11g01584 | 523 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Bda11g01584 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 389 | IPR011009 | - | |
Bda11g01584 | 523 | SUPERFAMILY | Tim10-like | 466 | 523 | IPR035427 | - | |
Bda11g01584 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 88 | 183 | - | - | |
Bda11g01584 | 523 | SMART | serkin_6 | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01584 | 523 | Pfam | Tim10/DDP family zinc finger | 461 | 521 | IPR004217 | - | |
Bda11g01584 | 523 | PANTHER | CELL DIVISION PROTEIN KINASE | 50 | 464 | - | - | |
Bda11g01584 | 523 | MobiDBLite | consensus disorder prediction | 9 | 40 | - | - | |
Bda11g01584 | 523 | Pfam | Protein kinase domain | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01584 | 523 | Gene3D | Mitochondrial import inner membrane translocase subunit tim13 like domains | 446 | 523 | IPR035427 | - | |
Bda11g01584 | 523 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 50 | 464 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01030 | Bda-Chr8:21356620 | Bda11g01584 | Bda-Chr11:49137799 | 0 | dispersed | |
Bda11g01584 | Bda-Chr11:49137799 | Bda14g00861 | Bda-Chr14:6618208 | 1.44E-179 | dispersed | |
Bda11g01584 | Bda-Chr11:49137799 | Bda13g00161 | Bda-Chr13:2092316 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69945 | PF00069 | Pkinase | 1.70E-68 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01584 | K08819 | - | zju:107404513 | 736.102 |