Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01591 ATGGACGGGGAGGAGTTGACGGAACAGGAGACTCAGCTTTATGACCGTCAGATTAGGGTTTGGGGAGCTGATGCTCAGAGAAGGCTGAGCAAAGCTCACATACTTGTCTGTGGAATGAAAGGGACTGTTGCTGAGTTTTGCAAAAATATTGTACTAGCTGGGGTGGGTAGTTTGACATTGGTTGATGATCGGGTGATGATCGGAGAGGCTCTTTCTGCAAATTTTTTAGTACCCTTTGATGAGAATTTGGAGGGATCCGGAGGGAAAACACTCGTGGAACTTTGCTGTGATTCTCTGAAAGATTTTAATCCGATGGTTTGTGTTTCAGTAGAAAGAGGTGATTTGGCAAGCTTTGGTGTAGAATTCTATGAGAAGTTTGACGTTGTAGTTGTCAGTAGTTGCTCTTTAACAACAAAAAAATTGGTCAATGAAAAATGTCGGACATTGTCGAAGCGGATAGCATTTTACACTGTTGACTGCAGAGATTCTTGCGGTGAAATATTTGTTGACTTGCATAACTACAAATACACAAAGAAAAAGCTGGAGGAATCCATTGAATGTGAACTACATTATCCGAGCTTTGAGGCAATTGCATGGTTTACTGAAATTCCCTCTAGATCAAACATTATGAAATCAAATATGCATATGCTATTTTTTTTTTCAAAACAAATTTTATTGAACTTTTTTTTAATATTTATTTTGTTCCAGGAAGCAATTTCAGTACCCTGGAAATCGCATCCAAGGAAAGTTTCAAAGTTATTCTATGCATTTAGAGTAGTAGAAAGTTTTGAAGAGGCTATGGGTTTTAACACTGGAGAGCTTTCTGATACGAATCTTACAATTCTTTCGAAGACGAAAAAAGATCTTTGCGAGTCACAGTTAATGAACGAATCGTTCATTTCCACCGCCCTTGTTGAGAGATTGGCTACACACACAAGGGAATTCCCTCCCGTTTGTGCAATCCTCGGGGGAATTCTCGGACAGGAGGTTATAAAAGCGATTTCTGGCAAAGGAGATCCAGTCAAGAACTTCTTCTACTTTGATGCCTTGGAGGGAAAAGGTATAATAGAGGACATATCTAGCTCTAACTAG 1092 39.56 MDGEELTEQETQLYDRQIRVWGADAQRRLSKAHILVCGMKGTVAEFCKNIVLAGVGSLTLVDDRVMIGEALSANFLVPFDENLEGSGGKTLVELCCDSLKDFNPMVCVSVERGDLASFGVEFYEKFDVVVVSSCSLTTKKLVNEKCRTLSKRIAFYTVDCRDSCGEIFVDLHNYKYTKKKLEESIECELHYPSFEAIAWFTEIPSRSNIMKSNMHMLFFFSKQILLNFFLIFILFQEAISVPWKSHPRKVSKLFYAFRVVESFEEAMGFNTGELSDTNLTILSKTKKDLCESQLMNESFISTALVERLATHTREFPPVCAILGGILGQEVIKAISGKGDPVKNFFYFDALEGKGIIEDISSSN 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49472101 49474802 - Bda008469.1 Bda11g01591 16699

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01591 363 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 4 219 IPR045886 -
Bda11g01591 363 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 234 361 IPR045886 -
Bda11g01591 363 Gene3D - 1 362 - -
Bda11g01591 363 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 1B-1-LIKE 4 219 - -
Bda11g01591 363 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 1B-1-LIKE 234 361 - -
Bda11g01591 363 Pfam ThiF family 14 353 IPR000594 -
Bda11g01591 363 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 358 IPR035985 GO:0008641
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01591 K10684 UBLE1A, SAE1; ubiquitin-like 1-activating enzyme E1 A [EC:6.2.1.45] - zju:107418017 481.87
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01591 Bda-Chr11:49472101 Bda11g01608 Bda-Chr11:49713353 2.67E-63 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g98 . . . . . Bpe13g00197 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01591 . . . . . . . . . . . . . . Bhi08g01510 Tan05g2983 . Lac10g0595 Hepe07g2120 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004029 1 5 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 5 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g01591 Bda_Chr11 FPKM 15.291946 9.984081 20.254038 24.604822 12.066463 11.362123 14.579286 20.100628 18.647518