Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01605 ATGGCGGGCACAGACTCTAGCCTCAGCGCTACCCCTTGCATGGAGTCCAAGTCTGGTTTTTGTGGAAGGACCAAGATTTTTCACAGTCTCCGACCTCCAGTGCCTCTCCCGCCGATATCCGAACCACTCTCTTTGACCCATTTCGCATTATCTCTTCTCCGGTTGTCCTCTCCGGCCACCAACACCACCGCTCTTATCGATTCCGACTCTGGCCACCACCTATCATACCCTTTATTCCTGCGGCGGGTACAAACTCTCAGCTCCAACCTCCGAGCCCTTACTTCTCTCTCCAAGGGAGATGTGGCTTTCATTCTGTCGCCTTCTTCTCTACAGATTCCGGTCCTCTACTTTTCTCTGCTATCTCTGGGTGTGGTTGTTTGTCCGGCTAATCCACTCGGTTCCGACTCGGAAGTGGCTCGCCAGATTCAACTGAGCAAACCCGTCATTGCTTTCGCGACCTCTTCTACAGCCAATAAGATTCCCAACCTCAAATTTGGTATTATTCTGATCGACTCGCCCGATTTCTTCTCCATGATGAACGAAACTAAACCAGTCAACGGAAAAAACAGTCTTTCAGATCCGGTTGAGGTGAAACAGTCTGATTCCGCTGCGATTCTTTACTCCTCCGGCACAACCGGACGAGTCAAGGGCGTTTTACTGAGTCATCGAAACTTCATCGCCTTAATTGCCGGATTTTACAGTCGCAACCACGAAGAGGATACTGCTGAAACTCCGGCCAACCCCGTCTCATTGTTCACGTTGCCGCTCTTTCATGTTTTCGGTTTCTTCATGCTCGTACGGGCGATTTCAATGGGGCAGACGCTGGTTCTGATGCAAAGGTTTGATTTTGAGGCATTGCTGAGAGTGGTGGAGAAGTTCAGGGTCAACTACATGCCAGTTTCGCCGCCCCTTGTGGTGGCTCTGGTCAAGTCAGATTTGACGGCCAAATATGATCTTAGCTCGCTTCTGGTACTTGGTTCTGGCGGAGCTCCGCTTGGAGAAGAGATTGTTCACAGATTCAGGGAGAAATTTCCCACCGTGGAAATTTTGCAGGGATACGGTTTGACTGAAAGCGCAGGAGGGGCGACGAGCTTAATAGGGCCGGAAGAGTACAAGCATATAAGTTCTGTGGGAAAATTGGCTGAAAATATGGAAGCCAAGATAGTAGACGCTACGACCGGAGAGGCATTGCCTCCTGGCCAGAAAGGCGAGCTGTGGCTCCGAGGCCCCACGATCATGCAAGAATCCGTTTTAGTATCCATTGTTTATGATGAACGGGCAGGCTATATTGGAGACGACGAAGCGACTTCTGCAACCTTGGACCCAGAAGGATGGCTGAAGACTGGTGATCTCTGTTATTTCGATTCGGATGGTTACCTCTACATTGTTGATCGATTGAAGGAATTGATAAAGTACAAGGCATATCAGGTACCCCCCGCCGAATTGGAGCATTTACTTCAGTCCAATTCCGAGATTGCAGATGCTGCTGTAATTCCGTATCCAGACGAAGATGCTGGAGAAATCCCTATGGCGTATGTAGTACGAAAGCCAGGAAGCAATATCACGGAGGCCCAAGTTATAGATTTCATCGCAAAACAGGTCGCGCCGTACAAGAAAATACGACGAATAGCTTTCATAAACTCCATCCCGAAATCTCCAGCGGGAAAGATATTGAGGAGGGAGCTTGTCCAACATGCTCTTTCTAGTGGTTCGTCAAAGCTGTAA 1725 49.39 MAGTDSSLSATPCMESKSGFCGRTKIFHSLRPPVPLPPISEPLSLTHFALSLLRLSSPATNTTALIDSDSGHHLSYPLFLRRVQTLSSNLRALTSLSKGDVAFILSPSSLQIPVLYFSLLSLGVVVCPANPLGSDSEVARQIQLSKPVIAFATSSTANKIPNLKFGIILIDSPDFFSMMNETKPVNGKNSLSDPVEVKQSDSAAILYSSGTTGRVKGVLLSHRNFIALIAGFYSRNHEEDTAETPANPVSLFTLPLFHVFGFFMLVRAISMGQTLVLMQRFDFEALLRVVEKFRVNYMPVSPPLVVALVKSDLTAKYDLSSLLVLGSGGAPLGEEIVHRFREKFPTVEILQGYGLTESAGGATSLIGPEEYKHISSVGKLAENMEAKIVDATTGEALPPGQKGELWLRGPTIMQESVLVSIVYDERAGYIGDDEATSATLDPEGWLKTGDLCYFDSDGYLYIVDRLKELIKYKAYQVPPAELEHLLQSNSEIADAAVIPYPDEDAGEIPMAYVVRKPGSNITEAQVIDFIAKQVAPYKKIRRIAFINSIPKSPAGKILRRELVQHALSSGSSKL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49672773 49675576 + Bda008486.1 Bda11g01605 16713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01605 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 564 - -
Bda11g01605 574 CDD 4CL 37 562 - -
Bda11g01605 574 Pfam AMP-binding enzyme 61 472 IPR000873 -
Bda11g01605 574 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Bda11g01605 574 Gene3D - 34 467 IPR042099 -
Bda11g01605 574 SUPERFAMILY Acetyl-CoA synthetase-like 60 567 - -
Bda11g01605 574 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 27 564 - -
Bda11g01605 574 Gene3D - 468 568 IPR045851 -
Bda11g01605 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01177 Bda-Chr8:47204989 Bda11g01605 Bda-Chr11:49672773 1.03E-162 dispersed
Bda11g01605 Bda-Chr11:49672773 Bda04g00768 Bda-Chr4:57173261 4.73E-105 dispersed
Bda11g01605 Bda-Chr11:49672773 Bda07g00643 Bda-Chr7:7773464 5.24E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01605 K01904 - csv:101213796 744.191