Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda11g01656 | ATGCAGAGCACGGCCTTGACGATTTCTCCTTCACTGCCTCTTCTCAAGTCTCGAAGGCAATATAATCCTGCTTTCAGCCATGGATTCAATCCCATGCGTCTTTCTTGCTCTTCTTCCAATCAGAACAGCCTCAAAAACTCCGTCAATGAGTCTCGGTCTTCGTCTTTGCCTGCCCGATCGTGGTCATTGTCGTCATTGTCTTTTCCGTCGTCCAAGGTAAGTCCGTGGACCGGTGCGCCGCTGCTCGCTTCTGATTATGGAAAGAGTGCGTTCGAGGTACGAGCTACTTCGGTGCCGGAGAGTGCAGGGGAGGATGCCAGTGCTGGGGGCTTGAAGAAAACGCTTGAGCTGGGAATGTTGATGGGTCTCTGGTACCTTTTCAACATATATTTCAATATCTACAACAAGCAGGTTCTTAAGGTCTATCCATTCCCTGTAACGGTCACTACAGTTCAATTTGCTGTTGGCACTCTGCTTGTTCTTTTTATGTGGGGTTTTAATCTCTATAAAAAGCCAAAGATCAGTGGTGTACAGCTTGCCGCTATTCTTCCATTGGCAGCTGTTCATACGCTGGGAAACCTTTTTACAAACATGAGTCTTGGGAAAGTTGCTGTATCATTCACGCACACAATCAAAGCTATGGAGCCTCTATTTTCCGTTGTCCTATCTGCCATGTTTCTAGGAGAGACACCTACTCCGTGGGTAGTTATTTCTCTTCTACCAATTATTGGCGGAGTGGCATTAGCATCAGCAACTGAGGCCTCATTTAATTGGTCCGGATTTTCGAGTGCAATGGCTTCCAATTTGACTAATCAATCACGAAATGTCCTCAGCAAAAAGCTCATGATTAAAAAAGAGGAGTCATTGGACAACATCACTCTCTTCTCAATAATTACCATTATGTCTTTTTTCTTGTTAGCACCAGTGGCTTTGTTCATGGAAGGTGTCAAGTTTACCCCTGCATATCTGCAATATGCAGGATTGAATGTCAAACAAGTGTTCATTAGATCTCTTCTTGCTGCTCTCTGTTTTCATGCTTATCAACAGGTTTCTTACATGATATTACAGAGGGTATCGCCAGTTACCCACTCAGTTGGCAACTGTGTGAAGCGTGTGGTGGTCATTGTGAGCTCTGTTATCTTCTTCCAAACACCCGTTTCTCCTATCAATAGTTTTGGCACCGCTGTGGCACTTGCCGGAGTTTTCTTGTATTCAAGGGTCAAGCGTATAAAGCCAAAGGCCAAAACAGTTTGA | 1254 | 44.82 | MQSTALTISPSLPLLKSRRQYNPAFSHGFNPMRLSCSSSNQNSLKNSVNESRSSSLPARSWSLSSLSFPSSKVSPWTGAPLLASDYGKSAFEVRATSVPESAGEDASAGGLKKTLELGMLMGLWYLFNIYFNIYNKQVLKVYPFPVTVTTVQFAVGTLLVLFMWGFNLYKKPKISGVQLAAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPLFSVVLSAMFLGETPTPWVVISLLPIIGGVALASATEASFNWSGFSSAMASNLTNQSRNVLSKKLMIKKEESLDNITLFSIITIMSFFLLAPVALFMEGVKFTPAYLQYAGLNVKQVFIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSFGTAVALAGVFLYSRVKRIKPKAKTV | 417 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 50639562 | 50642592 | - | Bda008550.1 | Bda11g01656 | 16764 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda11g01656 | 417 | PANTHER | SOLUTE CARRIER FAMILY 35 | 49 | 392 | - | - | |
| Bda11g01656 | 417 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 303 | 409 | - | - | |
| Bda11g01656 | 417 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 115 | 415 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
| Bda11g01656 | 417 | Pfam | Triose-phosphate Transporter family | 116 | 405 | IPR004853 | - | |
| Bda11g01656 | 417 | PANTHER | TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED | 49 | 392 | - | - | |
| Bda11g01656 | 417 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 160 | 250 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda11g01656 | Bda15g00555 | CCT | |
| Bda06g00602 | Bda11g01656 | CCT | |
| Bda11g01656 | Bda15g00555 | ECH | |
| Bda06g00602 | Bda11g01656 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda06g00605 | Bda-Chr6:8242992 | Bda11g01656 | Bda-Chr11:50639562 | 0 | dispersed | |
| Bda09g00389 | Bda-Chr9:4950552 | Bda11g01656 | Bda-Chr11:50639562 | 3.30E-74 | dispersed | |
| Bda11g01656 | Bda-Chr11:50639562 | Bda15g00555 | Bda-Chr15:8675523 | 0 | dispersed | |
| Bda14g01165 | Bda-Chr14:10982055 | Bda11g01656 | Bda-Chr11:50639562 | 2.51E-155 | transposed | |
| Bda11g01656 | Bda-Chr11:50639562 | Bda06g00602 | Bda-Chr6:8222811 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda11g01656 | K15283 | - | csv:101203848 | 607.831 |