Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01656 ATGCAGAGCACGGCCTTGACGATTTCTCCTTCACTGCCTCTTCTCAAGTCTCGAAGGCAATATAATCCTGCTTTCAGCCATGGATTCAATCCCATGCGTCTTTCTTGCTCTTCTTCCAATCAGAACAGCCTCAAAAACTCCGTCAATGAGTCTCGGTCTTCGTCTTTGCCTGCCCGATCGTGGTCATTGTCGTCATTGTCTTTTCCGTCGTCCAAGGTAAGTCCGTGGACCGGTGCGCCGCTGCTCGCTTCTGATTATGGAAAGAGTGCGTTCGAGGTACGAGCTACTTCGGTGCCGGAGAGTGCAGGGGAGGATGCCAGTGCTGGGGGCTTGAAGAAAACGCTTGAGCTGGGAATGTTGATGGGTCTCTGGTACCTTTTCAACATATATTTCAATATCTACAACAAGCAGGTTCTTAAGGTCTATCCATTCCCTGTAACGGTCACTACAGTTCAATTTGCTGTTGGCACTCTGCTTGTTCTTTTTATGTGGGGTTTTAATCTCTATAAAAAGCCAAAGATCAGTGGTGTACAGCTTGCCGCTATTCTTCCATTGGCAGCTGTTCATACGCTGGGAAACCTTTTTACAAACATGAGTCTTGGGAAAGTTGCTGTATCATTCACGCACACAATCAAAGCTATGGAGCCTCTATTTTCCGTTGTCCTATCTGCCATGTTTCTAGGAGAGACACCTACTCCGTGGGTAGTTATTTCTCTTCTACCAATTATTGGCGGAGTGGCATTAGCATCAGCAACTGAGGCCTCATTTAATTGGTCCGGATTTTCGAGTGCAATGGCTTCCAATTTGACTAATCAATCACGAAATGTCCTCAGCAAAAAGCTCATGATTAAAAAAGAGGAGTCATTGGACAACATCACTCTCTTCTCAATAATTACCATTATGTCTTTTTTCTTGTTAGCACCAGTGGCTTTGTTCATGGAAGGTGTCAAGTTTACCCCTGCATATCTGCAATATGCAGGATTGAATGTCAAACAAGTGTTCATTAGATCTCTTCTTGCTGCTCTCTGTTTTCATGCTTATCAACAGGTTTCTTACATGATATTACAGAGGGTATCGCCAGTTACCCACTCAGTTGGCAACTGTGTGAAGCGTGTGGTGGTCATTGTGAGCTCTGTTATCTTCTTCCAAACACCCGTTTCTCCTATCAATAGTTTTGGCACCGCTGTGGCACTTGCCGGAGTTTTCTTGTATTCAAGGGTCAAGCGTATAAAGCCAAAGGCCAAAACAGTTTGA 1254 44.82 MQSTALTISPSLPLLKSRRQYNPAFSHGFNPMRLSCSSSNQNSLKNSVNESRSSSLPARSWSLSSLSFPSSKVSPWTGAPLLASDYGKSAFEVRATSVPESAGEDASAGGLKKTLELGMLMGLWYLFNIYFNIYNKQVLKVYPFPVTVTTVQFAVGTLLVLFMWGFNLYKKPKISGVQLAAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPLFSVVLSAMFLGETPTPWVVISLLPIIGGVALASATEASFNWSGFSSAMASNLTNQSRNVLSKKLMIKKEESLDNITLFSIITIMSFFLLAPVALFMEGVKFTPAYLQYAGLNVKQVFIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSFGTAVALAGVFLYSRVKRIKPKAKTV 417
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 50639562 50642592 - Bda008550.1 Bda11g01656 16764
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01656 417 PANTHER SOLUTE CARRIER FAMILY 35 49 392 - -
Bda11g01656 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 409 - -
Bda11g01656 417 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 115 415 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bda11g01656 417 Pfam Triose-phosphate Transporter family 116 405 IPR004853 -
Bda11g01656 417 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 49 392 - -
Bda11g01656 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 250 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00605 Bda-Chr6:8242992 Bda11g01656 Bda-Chr11:50639562 0 dispersed
Bda09g00389 Bda-Chr9:4950552 Bda11g01656 Bda-Chr11:50639562 3.30E-74 dispersed
Bda11g01656 Bda-Chr11:50639562 Bda15g00555 Bda-Chr15:8675523 0 dispersed
Bda14g01165 Bda-Chr14:10982055 Bda11g01656 Bda-Chr11:50639562 2.51E-155 transposed
Bda11g01656 Bda-Chr11:50639562 Bda06g00602 Bda-Chr6:8222811 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01656 K15283 - csv:101203848 607.831