Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01663 | ATGGCTTCATCAAGCTCTTACAGTTCACCATGCGCCGCCTGCAAATTCCTCAGAAGAAAATGCTTACCAGGCTGCGTATTCGCACCTTATTTTCCACCAGAAGAACCTCAAAAATTTGCAAATGTTCACAAGATTTTCGGAGCCAGCAATGTAACGAAGCTCCTCAATGAGATTCTTCCTCATCAGAGAGAAGATGCAGTTAATTCTCTTGCCTACGAAGCAGAGGCAAGAATAAGAGATCCAGTCTTTGGCTGTTCTGGAGCCATCTCATTTTTCCAACGACAAGTCCAGAGACTCCAGAAAGAGCTGGACGCTGCAAACGCCGATCTGATTCGATATTCTTGCTTTGGGATTCCACCAAATTTTCAGATACAACGAGAAGTAGCTTTTGTTCAGCAAATGTCTTCTCGCATGAAACAATTTGAGTTCAACAGATTGGCCAGCAGTGAGGAAGGAGGGATAAACGAGAACCCTAATTCTTTCCCAGTCAATTACGCACTTCCTTGGAGTGAGAATTCATCTGGCTTTATCAATGGAGGAGGAGCAGATGGCCTGAACAAAAGTCTCTGA | 570 | 44.21 | MASSSSYSSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKIFGASNVTKLLNEILPHQREDAVNSLAYEAEARIRDPVFGCSGAISFFQRQVQRLQKELDAANADLIRYSCFGIPPNFQIQREVAFVQQMSSRMKQFEFNRLASSEEGGINENPNSFPVNYALPWSENSSGFINGGGADGLNKSL | 189 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 50732063 | 50732632 | - | Bda008556.1 | Bda11g01663 | 16771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01663 | 189 | Coils | Coil | 89 | 109 | - | - | |
Bda11g01663 | 189 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 107 | IPR004883 | - | |
Bda11g01663 | 189 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - | |
Bda11g01663 | 189 | PANTHER | ELONGATED PETIOLULE 1 | 1 | 184 | - | - | |
Bda11g01663 | 189 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 184 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda11g01663 | Bda15g00546 | CCT | |
Bda11g01663 | Bda15g00546 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01663 | Bda-Chr11:50732063 | Bda15g00546 | Bda-Chr15:8519291 | 1.42E-78 | dispersed | |
Bda11g01663 | Bda-Chr11:50732063 | Bda01g01103 | Bda-Chr1:45777636 | 4.44E-52 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16718 | PF03195 | LOB | 3.20E-40 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01663 | - | - | tcc:18604002 | 267.314 |