Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01678 ATGGCGAAATCCGGCGAAGTTTGCCGGCGGAGTTTGCCGGAGGAAGGGTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTAGCTGTCGACGATAGCCATGTCGATCGGAAGGTTATCGAGAGGTTGCTTAGAATCTCTTCTTGTAAAGTGACAGCAGTAGAGAGTGGGACGAGAGCTCTTCAGTTTCTGGGGTTGGATGGAGCTAAAACATCTGGAATTGATGGTTTGAAAGTGCATCTGATAATGACAGATTACTCGATGCCTGGAATGACAGGATATGAACTGCTGAAGAAGATCAAGGAATCGTCGGATTTCAGGGAAGTTCCTGTAGTCGTGATGTCGTCTGAGAATATCTTAGCTCGTATTGATAGGTGTTTGGAGGAAGGCGCAGAAGAGTTTATCGTGAAGCCGGTGAAACTCTCCGACGTGAAGCGATTGAAAGATTTTGTGATAACGAAAGGGAAAAGCGACGAAATTAGAGGGCGGAGATCGGAAAAGAGGAAGCTACGAGACGAAGAAAATGGGTTCTCGGACAATCCCGCTAGGAATTGTGAGGTTTCCACCCAGCTACGTAAGAAGCCTAGATTGTGCAAGATGAATTGA 603 47.26 MAKSGEVCRRSLPEEGSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVHLIMTDYSMPGMTGYELLKKIKESSDFREVPVVVMSSENILARIDRCLEEGAEEFIVKPVKLSDVKRLKDFVITKGKSDEIRGRRSEKRKLRDEENGFSDNPARNCEVSTQLRKKPRLCKMN 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 50923039 50924130 + Bda008574.1 Bda11g01678 16786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01678 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 18 185 - -
Bda11g01678 200 CDD REC_typeA_ARR 26 146 - -
Bda11g01678 200 SMART REC_2 24 147 IPR001789 GO:0000160
Bda11g01678 200 SUPERFAMILY CheY-like 23 146 IPR011006 -
Bda11g01678 200 Pfam Response regulator receiver domain 26 143 IPR001789 GO:0000160
Bda11g01678 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 185 IPR045279 GO:0009736
Bda11g01678 200 MobiDBLite consensus disorder prediction 161 178 - -
Bda11g01678 200 ProSiteProfiles Response regulatory domain profile. 25 151 IPR001789 GO:0000160
Bda11g01678 200 MobiDBLite consensus disorder prediction 161 182 - -
Bda11g01678 200 Gene3D - 24 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01678 Bda-Chr11:50923039 Bda15g00091 Bda-Chr15:3136179 3.33E-49 dispersed
Bda07g01573 Bda-Chr7:29161978 Bda11g01678 Bda-Chr11:50923039 2.22E-67 transposed
Bda10g01007 Bda-Chr10:44240060 Bda11g01678 Bda-Chr11:50923039 1.50E-66 transposed
Bda11g01678 Bda-Chr11:50923039 Bda14g00828 Bda-Chr14:6372462 8.73E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16721 PF00072 Response_reg 3.40E-21 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01678 K14492 - zju:107419317 249.98