Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01678 | ATGGCGAAATCCGGCGAAGTTTGCCGGCGGAGTTTGCCGGAGGAAGGGTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTAGCTGTCGACGATAGCCATGTCGATCGGAAGGTTATCGAGAGGTTGCTTAGAATCTCTTCTTGTAAAGTGACAGCAGTAGAGAGTGGGACGAGAGCTCTTCAGTTTCTGGGGTTGGATGGAGCTAAAACATCTGGAATTGATGGTTTGAAAGTGCATCTGATAATGACAGATTACTCGATGCCTGGAATGACAGGATATGAACTGCTGAAGAAGATCAAGGAATCGTCGGATTTCAGGGAAGTTCCTGTAGTCGTGATGTCGTCTGAGAATATCTTAGCTCGTATTGATAGGTGTTTGGAGGAAGGCGCAGAAGAGTTTATCGTGAAGCCGGTGAAACTCTCCGACGTGAAGCGATTGAAAGATTTTGTGATAACGAAAGGGAAAAGCGACGAAATTAGAGGGCGGAGATCGGAAAAGAGGAAGCTACGAGACGAAGAAAATGGGTTCTCGGACAATCCCGCTAGGAATTGTGAGGTTTCCACCCAGCTACGTAAGAAGCCTAGATTGTGCAAGATGAATTGA | 603 | 47.26 | MAKSGEVCRRSLPEEGSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVHLIMTDYSMPGMTGYELLKKIKESSDFREVPVVVMSSENILARIDRCLEEGAEEFIVKPVKLSDVKRLKDFVITKGKSDEIRGRRSEKRKLRDEENGFSDNPARNCEVSTQLRKKPRLCKMN | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 50923039 | 50924130 | + | Bda008574.1 | Bda11g01678 | 16786 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01678 | 200 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED | 18 | 185 | - | - | |
Bda11g01678 | 200 | CDD | REC_typeA_ARR | 26 | 146 | - | - | |
Bda11g01678 | 200 | SMART | REC_2 | 24 | 147 | IPR001789 | GO:0000160 | |
Bda11g01678 | 200 | SUPERFAMILY | CheY-like | 23 | 146 | IPR011006 | - | |
Bda11g01678 | 200 | Pfam | Response regulator receiver domain | 26 | 143 | IPR001789 | GO:0000160 | |
Bda11g01678 | 200 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 18 | 185 | IPR045279 | GO:0009736 | |
Bda11g01678 | 200 | MobiDBLite | consensus disorder prediction | 161 | 178 | - | - | |
Bda11g01678 | 200 | ProSiteProfiles | Response regulatory domain profile. | 25 | 151 | IPR001789 | GO:0000160 | |
Bda11g01678 | 200 | MobiDBLite | consensus disorder prediction | 161 | 182 | - | - | |
Bda11g01678 | 200 | Gene3D | - | 24 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01678 | Bda-Chr11:50923039 | Bda15g00091 | Bda-Chr15:3136179 | 3.33E-49 | dispersed | |
Bda07g01573 | Bda-Chr7:29161978 | Bda11g01678 | Bda-Chr11:50923039 | 2.22E-67 | transposed | |
Bda10g01007 | Bda-Chr10:44240060 | Bda11g01678 | Bda-Chr11:50923039 | 1.50E-66 | transposed | |
Bda11g01678 | Bda-Chr11:50923039 | Bda14g00828 | Bda-Chr14:6372462 | 8.73E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16721 | PF00072 | Response_reg | 3.40E-21 | CL0304 | Bda | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01678 | K14492 | - | zju:107419317 | 249.98 |