Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01690 GAACGTGATAATCTTCAGTTCATCAGAGCTGAAATGGATGAGGTTAGAGAAGAAAATCAAAGGCTAAAGACGTGCATTGATAGAATCAAGAGAGACAGCGAGATTCTTCAAACGAAAATCTTCAGCAAAATGAAAGACGGGTTGAAAAGTGCCGAAACGAACAAGATGGATCGAGAAATTAACGAATCGGAGCTCGTTTCGCTGAGTCTCGGATCATCTCCGAAGAACCCTAAAAAACCAAAATCAAAGAGCGGAGAAACTGAAGGAGGGTTAAGTCTCGTACTCGAATCAAACTTATTTTTAAACCCGAGTAAGAGCGATGGAAAGTGTTTGGAAGAGCGTAAGGAAGTCGAAGCTGCCGAGACATTGCCACCGAGTAAAGTTTCAAAGACGACGAGATCAAGCGAAGAAGAAAATGAAATTTCCATAACAAATCCTCCAAAAAAAGCTAGGGTTTCTGTGAGAGCTAGATGTGAGACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGGCAGAAAATTGCAAAAGGGAATCCATGCCCTAGAGCTTATTACCGCTGCACTGGATCACCAACTTGTCCGGTTCGAAAACAGGTGCAAAGATGTGCAGAAGACATGAGAATTTTAACAACCACCTACGAAGGAAACCACAACCATCATCTTCCTCCTTCAGCCACTGCCATGGCTTCCACCACTTCTGCTGCTGCTTCAATGCTCCTCTCTGGTTCATCCTCATCTTCCATTTCCAATCCGTACGGACTAAACTTTCATCTCTCTGATCTCACAAACCACAGACCTTCTCTCTCTTCTCCTTCTTTTTCTTCTCACCCAACAATCACCTTAGACCTCACTTCTTCAAACCCTTCTTCTTCTTCTTGTTCTTCTTCTTCTTTGAGCTTTTCTCAGAGAAACTCTTCTAGCCTTAGCTTTGGATCATGGAGGAACGGGGACTATAGCAATGGCTACCAAACTGGAACCATTGATTACGCAGGGAAGCTTCTGCAAGATAATATCTATCAGACCCTGAAAAACAGTTCCGCCATTGATGCAGCTCCTTCTTCTCAACAAGCTTCAACCGACGGAGTTTCTGCAGCGACAAAGGCACTAACTGCAGACCCAAACTTTCAATCTGCTTTAAAAGCTGCACTCTCATTGATTATCGACTCTGATAACAGTTATGGCGTTGGCCAGAGATTTAAGTGGCAAGAGGAGCCGTTGTTTTCTGTAACCAAGCCAAAAGAAGGTGGGTTCTCGTCAAATCTTTTGAGCAAAGCGCCATCGATTTGA 1293 43.7 ERDNLQFIRAEMDEVREENQRLKTCIDRIKRDSEILQTKIFSKMKDGLKSAETNKMDREINESELVSLSLGSSPKNPKKPKSKSGETEGGLSLVLESNLFLNPSKSDGKCLEERKEVEAAETLPPSKVSKTTRSSEEENEISITNPPKKARVSVRARCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGSPTCPVRKQVQRCAEDMRILTTTYEGNHNHHLPPSATAMASTTSAAASMLLSGSSSSSISNPYGLNFHLSDLTNHRPSLSSPSFSSHPTITLDLTSSNPSSSSCSSSSLSFSQRNSSSLSFGSWRNGDYSNGYQTGTIDYAGKLLQDNIYQTLKNSSAIDAAPSSQQASTDGVSAATKALTADPNFQSALKAALSLIIDSDNSYGVGQRFKWQEEPLFSVTKPKEGGFSSNLLSKAPSI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 51041601 51043758 + Bda008587.1 Bda11g01690 16798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01690 430 ProSiteProfiles WRKY domain profile. 158 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01690 430 Gene3D WRKY domain 148 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g01690 430 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01690 430 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g01690 430 Coils Coil 5 32 - -
Bda11g01690 430 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01690 430 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 399 IPR044810 GO:0003700
Bda11g01690 430 MobiDBLite consensus disorder prediction 112 148 - -
Bda11g01690 430 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 4 399 - -
Bda11g01690 430 MobiDBLite consensus disorder prediction 45 62 - -
Bda11g01690 430 MobiDBLite consensus disorder prediction 45 89 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00552 Bda11g01690 CCT
Bda11g01690 Bda15g00578 CCT
Bda06g00552 Bda11g01690 ECH
Bda11g01690 Bda15g00578 ECH
Bda11g01690 Bda14g00841 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01690 Bda-Chr11:51041601 Bda15g00578 Bda-Chr15:9002564 1.52E-87 dispersed
Bda11g01690 Bda-Chr11:51041601 Bda14g00841 Bda-Chr14:6479186 1.77E-138 wgd
Bda11g01690 Bda-Chr11:51041601 Bda06g00552 Bda-Chr6:7798195 8.27E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16722 PF03106 WRKY 2.30E-23 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01690 - - nnu:104586751 295.819