Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01700 ATGTCGCAGAAAAGATACCCAGATGATAGTAAAGCTCAAGCAGAGACTAATCCGGACGATAAGCGTCGAAGGGTTCCAACTTTCTATTCTGTGGTGGTGGATGCGGTTCGCAAGAATTATGCTGAAAAAATTCTGGAACCAATGATTCGAAGAGTGGTGAAAGAGGAATTGGAGTTGATAATGGAAAAGTATTGTGCAGGCATAGAACGGATAATTCGGGATGACAGCAAAGCGAATTTCTTTTCTCAGTCAGGAGTTTTAGAACTAAAATTTGTGAACTCCCTCTCCCTCCCAATTTATACTGGAGCGCGGATAATGGGAATAGATAATTCCAGCTTAAAAATTGCACTAATCAATGAGCTGACTGGAAAATATGTTGACTTCGAGCCTGAATCTTCAGCAAAGGTCGAAATTTTGGTCCTTGAGGGTGATTTTGATGGTGAGGATCGCGAGAGTTGGACATGTGACACATTTTGTAACAACATTTTGAGGGAGAGAGAAGGAAGGAAACCCCTTCTTGCAGGAGAAGTGGTTTTGAATCTTAAAGACGGCGCTGGTTTGGTCGGAGAGATTTGTTTTACGGATAATTCAAGCTGGACTAGGAGCCGTAAATTCAGGCTTGGGGCGAGAGTTGTGGATAAATGTCCTACAAATAGAATACGAGAAGCCAAGACCGAACCCTTTATTGTCAGAGACCACCGTGGCGTGTTATACAAAAAACATCATCCTCCACTTTTGAAGGACGAGGTATGGAGATTAGTGAAAATAGGAAAGGACGGAGCGTTTCATAACCGTTTGAGCCAGGAGAACATACATACCGTGAAAGATTTCCTTACCCTATTCAATATCGACGCTCCCAAGCTCCGGACGATTCTTGGCACAGGTATGTCTACGAAGATGTGGGAAGTAATCGTAAAACACGCTCAAACATGCATACACGATAACACAATGTATTTGTACCATTCTCCGTTCTCCCCGGAGAAAGCCGGAGTTGTCTTTAATGTGGTCGGGCAGCTGTTGGGAATAGTCTCGGACTGCCAGTATGTTTCGGTAGATAAGCTTTCGGAAACTAAAAAGCTCGACGCCCACAACTCAATCGTCTCCGCATTCGACGACTGGGATCGAGTGAGCCTTTTCAATGACGGTAGCAAATTTTTTCCTCATCCGAAAAGTGATTTCCTACTGGGAAGTGACGATTGGGAAGAAAATCTCGATTTCGGATGCGGAAAGAGTTCGAGTTTGCCAAACGAAATGAACACACCCCTCGTGATCTGTTATGGCGACCAATTGAATCGATCTTTCTTCGATGAAGATGACACTCCATTTCTCGAAACAGACGTACAGAACCTGGATTTCCAAAACTACGAAGAATTGGGCGATACAAATAAAACTAAAGGCCAAGAAATGCTGCTCGCGAAGAAGCGATGGAGAAAACTGAAAAGTGTGTTGCAATGGCTCTGCTCCAAGAGGATTGCTGCTGAATAG 1485 43.84 MSQKRYPDDSKAQAETNPDDKRRRVPTFYSVVVDAVRKNYAEKILEPMIRRVVKEELELIMEKYCAGIERIIRDDSKANFFSQSGVLELKFVNSLSLPIYTGARIMGIDNSSLKIALINELTGKYVDFEPESSAKVEILVLEGDFDGEDRESWTCDTFCNNILREREGRKPLLAGEVVLNLKDGAGLVGEICFTDNSSWTRSRKFRLGARVVDKCPTNRIREAKTEPFIVRDHRGVLYKKHHPPLLKDEVWRLVKIGKDGAFHNRLSQENIHTVKDFLTLFNIDAPKLRTILGTGMSTKMWEVIVKHAQTCIHDNTMYLYHSPFSPEKAGVVFNVVGQLLGIVSDCQYVSVDKLSETKKLDAHNSIVSAFDDWDRVSLFNDGSKFFPHPKSDFLLGSDDWEENLDFGCGKSSSLPNEMNTPLVICYGDQLNRSFFDEDDTPFLETDVQNLDFQNYEELGDTNKTKGQEMLLAKKRWRKLKSVLQWLCSKRIAAE 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 51182739 51185107 + Bda008596.1 Bda11g01700 16808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01700 494 Pfam Calmodulin binding protein C-terminal domain 317 376 IPR046829 -
Bda11g01700 494 Pfam Calmodulin binding protein central domain 246 311 IPR046830 -
Bda11g01700 494 MobiDBLite consensus disorder prediction 1 20 - -
Bda11g01700 494 Pfam Calmodulin binding protein-like N-terminal domain 87 233 IPR046831 -
Bda11g01700 494 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 492 - -
Bda11g01700 494 PANTHER OS02G0177800 PROTEIN 1 492 IPR012416 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01966 Bda-Chr1:56055490 Bda11g01700 Bda-Chr11:51182739 8.79E-64 dispersed
Bda11g00995 Bda-Chr11:9724837 Bda11g01700 Bda-Chr11:51182739 2.26E-105 dispersed
Bda11g01670 Bda-Chr11:50866051 Bda11g01700 Bda-Chr11:51182739 2.48E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01700 - - cit:102629177 485.337