Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01710 | ATGTCCGACAGCGAAGATCATCAGTTTGAATCCAAGGCCGACGCCGGCGCTTCCAAAACCTACCCTCAGCAAGCTGGTACTGTTCGCAAGAATGGCTACATCGTCATCAAGGCCCGCCCTTGCAAGGTTGTTGAAGTTTCTACCTCCAAGACTGGAAAACATGGCCATGCTAAGTGCCACTTTGTTGGAATTGACATTTTCACTGGCAAGAAGTTTGATGATATAGTTCCCTCTTCCCATAATTGTGATGTTCCTCATGTTAATCGCACTGATTATCAGCTTATCGATATTTCAGAGGATGGATTTGTGAGCTTGCTGACAGAAAATGGAAACACCAAGGATGATCTGAGGCTCCCAAGTGATGATGGCTTGCTTACCCAGGTTGGTTTAATGCGCATCACATTTACTTTTTTCCTTATTAAGGAGGGTTTTTCTGACGGGAAAGATCTTGTTGTGACTGTGATGTCTGCCATGGGAGAAGAGCAGATTTGTGCTCTGAAGGACATTGGCCCCAAG | 516 | 45.54 | MSDSEDHQFESKADAGASKTYPQQAGTVRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKFDDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPSDDGLLTQVGLMRITFTFFLIKEGFSDGKDLVVTVMSAMGEEQICALKDIGPK | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 51423275 | 51425143 | - | Bda033164 | Bda11g01710 | 16818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01710 | 172 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 51 | 58 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01710 | 172 | PIRSF | Transl_init_eIF5A | 1 | 170 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01710 | 172 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 169 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01710 | 172 | SMART | eIF_5a_2 | 86 | 167 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01710 | 172 | PANTHER | BNAA07G09420D PROTEIN | 1 | 169 | - | - | |
Bda11g01710 | 172 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 18 | 165 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01710 | 172 | SUPERFAMILY | Nucleic acid-binding proteins | 87 | 169 | IPR012340 | - | |
Bda11g01710 | 172 | Gene3D | - | 87 | 171 | IPR012340 | - | |
Bda11g01710 | 172 | SUPERFAMILY | Translation proteins SH3-like domain | 16 | 94 | IPR008991 | - | |
Bda11g01710 | 172 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 86 | 127 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01710 | 172 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 140 | 167 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01710 | 172 | CDD | S1_eIF5A | 87 | 169 | - | - | |
Bda11g01710 | 172 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bda11g01710 | 172 | Gene3D | - | 1 | 86 | IPR014722 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda11g01710 | Bda14g00862 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01710 | Bda-Chr11:51423275 | Bda11g01711 | Bda-Chr11:51515960 | 1.26E-114 | tandem | |
Bda10g01073 | Bda-Chr10:44726450 | Bda11g01710 | Bda-Chr11:51423275 | 9.70E-102 | wgd | |
Bda11g01710 | Bda-Chr11:51423275 | Bda14g00862 | Bda-Chr14:6643844 | 7.91E-111 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01710 | K03263 | - | jre:109010735 | 303.523 |