Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01711 | ATGTCCGACAGCGAAGATCATCAGTTTGAATCCAAGGCCGACGCCGGCGCTTCCAAAACCTACCCTCAGCAAGCTGGTACTGTTCGCAAGAATGGCTACATCGTCATCAAGGCCCGCCCTTGCAAGGTTGTTGAAGTTTCTACCTCCAAGACTGGAAAACATGGCCATGCTAAGTGCCACTTTGTTGGAATTGACATTTTCACTGGCAAGAAGTTTGATGATATAGTTCCCTCTTCCCATAATTGTGATGTTCCTCATGTTAATCGCACTGATTATCAGCTTATCGATATTTCAGAGGATGGATTTGTGAGCTTGCTGACAGAAAATGGAAACACTAAGGATGATCTGAGGCTCCCAAGTGATGATGGCTTGCTTACCCAGATTAAGGAGGGTTTTTCTGACGGGAAAGATCTTGTTGTGACTGTGATGTCTGCCATGGGAGAAGAGCAGATTTGTGCTCTGAAGGACATTGGCCCCAAG | 480 | 46.25 | MSDSEDHQFESKADAGASKTYPQQAGTVRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKFDDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPSDDGLLTQIKEGFSDGKDLVVTVMSAMGEEQICALKDIGPK | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 51515960 | 51517780 | - | Bda033165 | Bda11g01711 | 16819 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01711 | 160 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 51 | 58 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01711 | 160 | SUPERFAMILY | Nucleic acid-binding proteins | 87 | 157 | IPR012340 | - | |
Bda11g01711 | 160 | Gene3D | - | 1 | 86 | IPR014722 | - | |
Bda11g01711 | 160 | SUPERFAMILY | Translation proteins SH3-like domain | 16 | 94 | IPR008991 | - | |
Bda11g01711 | 160 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 18 | 154 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01711 | 160 | CDD | S1_eIF5A | 87 | 157 | - | - | |
Bda11g01711 | 160 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 86 | 155 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01711 | 160 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 157 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01711 | 160 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bda11g01711 | 160 | SMART | eIF_5a_2 | 86 | 155 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bda11g01711 | 160 | PIRSF | Transl_init_eIF5A | 1 | 158 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bda11g01711 | 160 | PANTHER | BNAA07G09420D PROTEIN | 1 | 157 | - | - | |
Bda11g01711 | 160 | Gene3D | - | 87 | 159 | IPR012340 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01480 | Bda-Chr7:27504947 | Bda11g01711 | Bda-Chr11:51515960 | 2.81E-105 | dispersed | |
Bda10g01073 | Bda-Chr10:44726450 | Bda11g01711 | Bda-Chr11:51515960 | 1.98E-105 | dispersed | |
Bda11g01711 | Bda-Chr11:51515960 | Bda14g00862 | Bda-Chr14:6643844 | 1.90E-114 | dispersed | |
Bda11g01710 | Bda-Chr11:51423275 | Bda11g01711 | Bda-Chr11:51515960 | 1.26E-114 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01711 | K03263 | - | jre:108997403 | 312.383 |