Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01750 ATGGCTGGTGGTAGAAGGAAAAAGCAACATATTAGAAGAATTCATGCTTTTCATTGCGGAAAAGCATCCTTCAAAATCGATCACTCTCTCATCGGAGGGCCCGGATTTTCCAGGGTTGTATATGTCAATGATCCGGATTGTTTGGATGCTACTCTTCTCAACTATGGAGGGAATTACGTCAAAACGACAAAATATACACTCGCTACGTTCTTCCCCAAATCGTTGTTCGAGCAATTTAGACGCGTTGCCAATATATATTTCCTCATTAATGCATTGCTTTCCTTCACACCGCTCTCGCCTTACTCTGCCGTGAGTAATGTTCTTCCTCTGGTTGTCGTGATTGGTGTTACGATGGCGAAAGAGGCTATCGAAGATTGGAGGAGGCAAAAGCAGGATATTGAAATGAACAACAGGAAGGTGAAGGTGAACTTCGGAGACGGCATCTTCAATGACGTAAAATGGAAGGATTTGAGAGTTGGAGATGTTGTTAGAGTAGAAAAAGATGAGTTTTTCCCTGCCGATCTGATCTTACTCTCGTCGAGTTACGAGGAAGCGATTTGTTACGTGGAGACCACCAATCTCGACGGAGAAACGAATTTGAAGCTAAAACAAGCTCTCGAATTGACTGCAAACTTCCACGAAGATTCAAGCTTCCAAGATTTCAGGGCCGTAATAAAATGCGAAGATCCAAACGCAAATCTATACTCGTTCGTGGGCAGTTTGATGCTCGAAGAACAGCAGTACCCTCTCAATCCTCAGCAGCTTCTTCTCCGAGACTCGAAGCTGAGAAACACTGATTTCATCTATGGAGTTGTGATATTTACAGGTCATGATACAAAAGTTATTCAGAATTCAACTGCTCCTCCTTCGAAGAGAAGCACCATTGAGCGAAGGATGGATAAAATAGTCTACTTCTTGTTCTTTGTTCTGGTTTTGATGTCTTTTATCGGGTCAATTTTCTTTGGTATATCGACTAGAGAGGACATAGAAAATGGACGTATGAAAAGATGGTATCTCAGACCGGACGATACGACGATATTTTACAGCCCGACGGAAGCTCCAGTTGCGGCAATTTTGCAATTTTTGACTTCCTTGATGTTGTACAGCTATTTGATCCCGATTTCCTTGTATGTGTCGATAGAAATCGTCAAAGTTCTTCAGAGTGTGTTCATCAATTATGATGAATTAATGTACTATGCAGAGACCGATAAGCCAGCCCGGGCACGAACGTCGAATTTGAACGAAGAGCTTGGGCAAGTGGAAACTATACTTTCTGATAAAACAGGAACTTTGACTTGTAATTCGATGGAGTTCATCAAGTGTTCGATTGCCGGAACTGCATATGGCAAAGGAATTACGGAAGTTGAGAGAGCTCTTGCGAGGAGAAAAGGGTCGTCTTTGCCTCGGGACGAGACAGTCGAAGAAGGAAGTGGTGAAGAATTGATCGAAGGAAAGTCGGAGGTGAAGGGATTTAATTTTAACGATGAAAGAATAACGAACGGAAAGTGGATCAATGAGCCTCGAGCCGATATAATCAGGAAGTTTCTTCAGCTTTTGGCGATTTGCCACACTGCCATACCAGAAGTTGATCCGGAAACCGAAAGAATTTCGTATGAGGCTGAATCCCCCGACGAGGCCGCATTTGTGATTGCAGCTAGAGAACTTGGCTTTGAATTCTACGGACGGACTCAAACAACCATCTCTGTTCTTGAGATCGATCCTTCAACCGATATGAAATTCGAAACGTCTTACCAACTTTTGGATATCTTAGAATTCAGCAGCTCAAGAAAAAGAATGTCTGTGATTGTTAGAAACTCGGATGGAAAACTATTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCTAAGAATGGAAGAGAGTTTGAAGAGGAGACAAAGAGCCACATTAATGAGTATGCTGATGCTGGTTTGAGAACTCTGGTATTAGCATATCGTGAGCTTGATGAGGACGCATACAGAACTTTTCACGAGGAATTGACCAACGCAAAAAACTCGGTTAGTGCAGATCGAGAGGAAATGCTCGAGCAAATGTCAGAAACAATAGAGAAAGATCTCATTCTTCTAGGCGCTACTGCAGTCGAAGACAAGCTTCAAAACGGGGTACCGGAATGCATCGACAAACTTGCACAGGCAGGAATCAAGATATGGGTTTTGACTGGAGATAAAATGGAGACTGCTATCAATATTGGGTTTGCTTGTAGTTTACTTAGACAAGGGATGAAACAAATTATAATCAACTCTGAGACTCCCGACGCTAAATCATTGGAGAAGATTGGGGATAATGCCGCTGCTGCCGAGGCTGTTAAGGCAAGTATTATAGAGCAATTAAGAAATGCAAAGGCATTGCTTACTACTGCTAAAATTTCGGGGGCGATGGCTTTGATCATTGACGGGAAGTCGCTTACCTACGCTTTGGAGGAGGATGTTAAGGACCTATTTTTAGATCTCGCCATTGGCTGTTCGTCCGTCATTTGTTGCCGTTCTTCTCCCAAACAGAAAGCTCTCGTTACACGACTTGTCAAGCGAAGAACACGACACACCACCCTGGCGATCGGTGATGGAGCAAACGATGTTGGCATGCTTCAAGAGGCTGATATTGGTGTCGGTATTAGCGGTGTTGAAGGAATGCAGTTATTCCCGTGTTTTCAGGCAGTCATGTCGAGTGATATTGCAATTGCACAGTTTAGGTTTCTGGAGAGACTGCTGCTTGTGCATGGGCACTGGTGCTATCGAAGGATCTCGTCAATGATTTGCTATTTTTTCTACAAGAACATTGTTTTCGGCTTCACTCTCTTCTTCTTTGGAATTTACGCGTCCTTTTCCGGCCAATCTGCTTACAATGACTGGTTTCTGTCTCTGTACAATGTCTTCTTCACGTCCCTCCCGGTGATCGCGTTGGGAGTTCTCGACCAAGACGTATCCGCTCGTTTCTGTCTCAAGGATGCTCTGAAGCCCGGCATAGATACGGCAATTCCATTTGTACAGCGTGCCGGAGAACAGGGCTTAAAGGTTGCTTCTCCGGCCATTTCCGAGGCATCAAAGAATGGTAAAGAGCCAATCCAGAGCTCCGGCATTGATGCAGAGCCTTTACAGTTTGCAGCTGAGAAAACTGGTAATATTGAAGTAGCAAAGCCCCTAGCTTCTTCAACTTTCAAGACCATCGTAACAACAAATCCTCCAGTACTCGGTGATGCAGCCGGTGCATTGTTTCTAACTCATCTTCTCCTTCCCCCCATTTGGTCAGTCATCGCTTTCAGCCTCCGTGGTTTTCAAGGTAAGCTAATAGAATTCCATTCATTGTCACCATCGTCTCTTTTAATTTTTAGCTTGGAAGAACTACCAAGCAAGTTAAAAGGCATTGCCCACAACCTGAAGAGAGTAGAAGCCGACATTGGAGCTCTGAAGATTTTGTATCTCAAAAAAATTAACAAAGGCTCCAACATCGTTGTTCTTGACTCGTACTCAGACTCTGGTTTAAGTAGTAGCAAACTATTAGGAACGGAGTCGTTTCATTTTGCTGTTGCTGAGGTAATCTCACTATCCCAAGTCATGCCCGCATCAACCAGACGATTCGATACGAAAACCGTAATTGGTAAAAAATTACTTCCAGGATCTGATTAA 3654 43.51 MAGGRRKKQHIRRIHAFHCGKASFKIDHSLIGGPGFSRVVYVNDPDCLDATLLNYGGNYVKTTKYTLATFFPKSLFEQFRRVANIYFLINALLSFTPLSPYSAVSNVLPLVVVIGVTMAKEAIEDWRRQKQDIEMNNRKVKVNFGDGIFNDVKWKDLRVGDVVRVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALELTANFHEDSSFQDFRAVIKCEDPNANLYSFVGSLMLEEQQYPLNPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNSTAPPSKRSTIERRMDKIVYFLFFVLVLMSFIGSIFFGISTREDIENGRMKRWYLRPDDTTIFYSPTEAPVAAILQFLTSLMLYSYLIPISLYVSIEIVKVLQSVFINYDELMYYAETDKPARARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGTAYGKGITEVERALARRKGSSLPRDETVEEGSGEELIEGKSEVKGFNFNDERITNGKWINEPRADIIRKFLQLLAICHTAIPEVDPETERISYEAESPDEAAFVIAARELGFEFYGRTQTTISVLEIDPSTDMKFETSYQLLDILEFSSSRKRMSVIVRNSDGKLLLLCKGADSVMFERLAKNGREFEEETKSHINEYADAGLRTLVLAYRELDEDAYRTFHEELTNAKNSVSADREEMLEQMSETIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIINSETPDAKSLEKIGDNAAAAEAVKASIIEQLRNAKALLTTAKISGAMALIIDGKSLTYALEEDVKDLFLDLAIGCSSVICCRSSPKQKALVTRLVKRRTRHTTLAIGDGANDVGMLQEADIGVGISGVEGMQLFPCFQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFGIYASFSGQSAYNDWFLSLYNVFFTSLPVIALGVLDQDVSARFCLKDALKPGIDTAIPFVQRAGEQGLKVASPAISEASKNGKEPIQSSGIDAEPLQFAAEKTGNIEVAKPLASSTFKTIVTTNPPVLGDAAGALFLTHLLLPPIWSVIAFSLRGFQGKLIEFHSLSPSSLLIFSLEELPSKLKGIAHNLKRVEADIGALKILYLKKINKGSNIVVLDSYSDSGLSSSKLLGTESFHFAVAEVISLSQVMPASTRRFDTKTVIGKKLLPGSD 1217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52254042 52260824 - Bda008660.1 Bda11g01750 16858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01750 1217 SUPERFAMILY Calcium ATPase, transduction domain A 145 283 IPR008250 -
Bda11g01750 1217 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 993 - -
Bda11g01750 1217 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Bda11g01750 1217 Gene3D - 105 286 - -
Bda11g01750 1217 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda11g01750 1217 Gene3D - 472 702 IPR023299 GO:0000166
Bda11g01750 1217 SFLD p-type atpase 408 919 IPR044492 -
Bda11g01750 1217 CDD P-type_ATPase_APLT_Dnf-like 57 991 - -
Bda11g01750 1217 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 986 IPR023298 -
Bda11g01750 1217 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 993 - -
Bda11g01750 1217 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Bda11g01750 1217 Pfam E1-E2 ATPase 135 336 - -
Bda11g01750 1217 SFLD Haloacid Dehalogenase 408 919 - -
Bda11g01750 1217 SUPERFAMILY HAD-like 412 912 IPR036412 -
Bda11g01750 1217 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 701 IPR023299 GO:0000166
Bda11g01750 1217 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 991 IPR032630 -
Bda11g01750 1217 Pfam Cation transport ATPase (P-type) 539 625 - -
Bda11g01750 1217 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 991 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bda11g01750 1217 Coils Coil 667 687 - -
Bda11g01750 1217 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Bda11g01750 1217 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Bda11g01750 1217 Coils Coil 116 143 - -
Bda11g01750 1217 Gene3D - 703 912 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01750 Bda-Chr11:52254042 Bda14g00904 Bda-Chr14:7028827 0 dispersed
Bda11g01750 Bda-Chr11:52254042 Bda11g01755 Bda-Chr11:52303369 0 proximal
Bda11g01750 Bda-Chr11:52254042 Bda14g00903 Bda-Chr14:7026005 1.43E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01750 K01530 K14802 pop:7490079 1576.61