Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01751 GACATAGTGGGGAAGTCCAAAAAAGATGCTTCGCTTCCGAAAGCAACAATGACCAAAATTATCAAGGAGATGCTCCCACATGATGTGTGCGTCGTGAGGGATACTCAGGATCGTCTGATCGAGCAGTTTATAAGCCTTCTATCATCAGAGTCTAATGAAGTTTGTTACAAAGAAGAGAGAGGAACAATTGCTCCTGAGCATGTGTTCAAGGCTTTGGAGGTTCTCTGTTTTGGCAATTACATCGAGGAAGTTTTCGCTGTTTATGAACAACACAAGCTCAAAACTATGCAGGACTCTTTGAAAAGTGGGAAGTGGAGCGACGGAGGGAAAATGCTAGAGGAAGAAGCTATCGCTGAACAGCAGAGATTGTTCGCAGAGGCACGGGCAAGAATGAACGGCGGTGTCGCTCAACTCAAGCATTCGGATTCAAACCAAAGTTTAGAGAACTAA 450 44.67 DIVGKSKKDASLPKATMTKIIKEMLPHDVCVVRDTQDRLIEQFISLLSSESNEVCYKEERGTIAPEHVFKALEVLCFGNYIEEVFAVYEQHKLKTMQDSLKSGKWSDGGKMLEEEAIAEQQRLFAEARARMNGGVAQLKHSDSNQSLEN 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52275714 52277620 + Bda008662.1 Bda11g01751 16859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01751 149 Gene3D Histone, subunit A 3 137 IPR009072 GO:0046982
Bda11g01751 149 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 10 72 IPR003958 -
Bda11g01751 149 PANTHER PROTEIN DR1 HOMOLOG 1 148 IPR044255 -
Bda11g01751 149 SUPERFAMILY Histone-fold 9 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01751 Bda-Chr11:52275714 Bda15g00650 Bda-Chr15:9955655 2.58E-75 dispersed
Bda11g01751 Bda-Chr11:52275714 Bda11g01756 Bda-Chr11:52332330 2.78E-67 proximal
Bda11g01751 Bda-Chr11:52275714 Bda14g00905 Bda-Chr14:7036190 3.24E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16727 PF00808 CBFD_NFYB_HMF 1.40E-10 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01751 K21751 - qsu:111987282 219.164