Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01762 AAGATGATTTCTAATCCAAAACAAAAGGGTGATTTTCAAGCAAAGCAAGAGGGTGAGATAGATTATGGGAAGATCTCCAAGGCATCTACAAGTGCAAGGCAATGGTTCGGGTTGAGAAATCCGAGAATCGTCCGAGTTTCTCGATCGTTCGGAGGAAAAGATAGACATAGTAAAGTATGCACCATAAAAGGGTTAAGAGACAGGAGGATTAGACTTTCAGTCCCCACTGCAATTCAGCTTTATGATCTTCAAGAACGCCTCGGCCTTGGCCAACCCAGCAAGGTGATCGATTGGCTGTTAGAAGTGACGAAACTCGATATCGATAAGCTCCCTCCGCTTCAATTTTCAGGATTCGGACAATTTCCTCAACACATGCTAGTTTCTCACGATTTAATCAGTAATCAATCCAATCAATCTTCATCGATTTTCCCATTTTTCGATGCAAATAGCACTTCAACATTCATGAAGGATGTAGAAGATGGCGATTCAGTGAGAGCAAAAAGTAAAGGGAAGGGGATAAGAACAACTGACCATCATCATCAGACGAATCAAGAGAGACTTGGCGATTTCCCTTCACAAATTGGAGCTCAGAATTTTCTTCTCAACAATTCTCTTTCCGAAAATACTTCGAGTTTATCGATAGGAGGTCATGGATTATATTCGTCACAGATCGAAGATCATCACCCGAATGATACGACATTCTTCGCCCCGTCAGGATCACAGCTGTTCTTCTGTCCACCATCGACAACGCCTACACTTTTTACACCTTACCCTTCCTATATTACCACCCAAGCAGAGAATGAACAACGGCAATTCAACCATATCCAATTTCTCGGCTCGAGTTTGTCCGTCGTACCGACTCTCCATTCCTTTCCTAAACTTCTTCTTCCGCAACAGAATGGCAGCCAAGGGAAGGATAATAATGCCACTGGTTCATGA 939 42.92 KMISNPKQKGDFQAKQEGEIDYGKISKASTSARQWFGLRNPRIVRVSRSFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQERLGLGQPSKVIDWLLEVTKLDIDKLPPLQFSGFGQFPQHMLVSHDLISNQSNQSSSIFPFFDANSTSTFMKDVEDGDSVRAKSKGKGIRTTDHHHQTNQERLGDFPSQIGAQNFLLNNSLSENTSSLSIGGHGLYSSQIEDHHPNDTTFFAPSGSQLFFCPPSTTPTLFTPYPSYITTQAENEQRQFNHIQFLGSSLSVVPTLHSFPKLLLPQQNGSQGKDNNATGS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 52454642 52455580 + Bda008682.1 Bda11g01762 16870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01762 312 MobiDBLite consensus disorder prediction 165 185 - -
Bda11g01762 312 PANTHER TRANSCRIPTION FACTOR TCP17 2 291 - -
Bda11g01762 312 Pfam TCP family transcription factor 52 175 IPR017887 -
Bda11g01762 312 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Bda11g01762 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 291 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g01762 Bda14g00885 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01762 Bda-Chr11:52454642 Bda13g01720 Bda-Chr13:40523880 1.71E-50 dispersed
Bda11g01736 Bda-Chr11:52030918 Bda11g01762 Bda-Chr11:52454642 0 wgd
Bda11g01762 Bda-Chr11:52454642 Bda14g00885 Bda-Chr14:6837818 3.60E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16730 PF03634 TCP 2.10E-25 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01762 - - tcc:18604854 280.411