Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01805 | ATGAAAAACCTTCTCAAAAAGCTGCATATAGTCTCCACTCAATCAGAAGATGCAGAGGGGCCAACTTCATCAAGAACCAACAAGTTTGCTCATAGTTCATCTCCTGATAGGCTGCACTCAAGGTCCCATCATAATTCTGAGCACAAGCCATTTTCCGGGCTATCAAATTGGCTAAACTCTGTTACTAATAGACATAGTCACAGCTCCCAATCTAGTTCTCATGTCAGAGGAGAGAGAATGGAACCTTCTGATCCTGGTAGTACTAGTGGTTTAGAGGTCGTTGTGGACACTGCAAAACTCGATTCTGAATCGAGTAACTCTAGAGATCCTGATATTGATGAAGAATATCAGATTCAGCTGGCTTTGGAGTTGAGTGCTAGAGAAGATCCTGAGGCTGTGCAGATTGAGGCTGTAAAGCAGATTAGTTTGGGCTCTTGTGATCCTGTAAATACTCCAGCTGAAGTTATTGCCTACCGTTACTGGAATTACAATTGTCTTAGCTATGATGATAAGATCATGGATGGCTTCTATGATCTCTATGGAGTCTTAACAGAATCTACCTCAGATAAAATGCCATCTCTAGTCGATCTGCAAGGAACTCCATTGTCAGACAGTGTCACTTGGGAAGCAATCCAGGTCAACAGAGCTGCTGATGCAAACTTACTGAAACTTGAGCAGATGGCCTTGGAGATTGTTATCAAGAATCGGTCAAATGATCTCGTTTTTGCGGATAGAAATTTGGTTCGACAGCTTGCTGATTTAGTAGCTAACCAAATGGGAGGACCAGTTGGGGATCCTGAAAAGATGACAAGAAAATGGAAAAACCTTAGTTACACGTTGAAAGCAACTCTTGGTAGCTTGGTTTTGCCTCTTGGTTCTTTAACAGTTGGGTTGGCTCGTCATCGTGCGTTGTTATTCAAGCTTTTGGCAGACGGTGTGGACATTCCATGTCGATTGGTGAAAGGACATCAATACACTGGTTTCGATGATGTGGCTATGAACTTTGTAAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCTGGGACACTTATTCCGGCTGATGCAGCTCTACCACGTGTAGCATATGATGAATCTAACTTTCATCCCACTCCATCATCTAGAGATGTCGGTTCTTCAAGCAGTGGGATTGGGAGTTCTTTCGAGGAAAATGCAGATTTTGGGACATTGGATAAGAAATCAGCGTTCAACAATTTCGGTTCTTCGGGAAAGGAAGGTGATGATAAAGTAGAATCCACTTCTTATGCAAATGTAAGTGGCCCCAGCAGAAGTGGGGAAGGATTGAAGAAACATTCAGATAATAGTAAAAATTCTTCCAATGCAGAGAAGGCCCAAGTGCAAGATTCGCCTGGCCGGTCTTACATGCATACTAGATCACCTTCGTGGACAGAAGGCGTTAGCTCACCTGCTGTGCGTAGAAAGAAAGTTAAAGATGTTTCACAATACATGATCGATGCAGCCATAGAGAATCCGCAATTGGCTCAGAAGCTCCACAATGTGTTACTTGAAAGTGGAGTTGTTGCTCCTCCCAACTTGTTTACTGAAATTTATAACGATCAGTTAGATATGTCTAATCCCGAAACCAAATCCGATGAAATGAAGAAGCAGATAAGCTCCAAAGAAAATTCAGGCCATAATGATTATAACCCAGGTCAAATTTTGCCTCCCTTGCCACAACAAAAAGGTAACTTTAGAACGAGTCCTGGCCAGCCACAACATGTCAAACATGCAGACTCATCAGGGGCCAACTTTCCTCCTGAGACCAGGGAGCCAATTGGACAACCTATCTTGATACAGTCAGACACAGCTCCTGGGAAGTACAGCCGAAAGGTTCCAGTTGCGGCGGCTGCGGCTGCTGCAGCGGCTGTTGTTGCATCTTCCATGGTGGTGGCTGCAGCAAAGTCGAGTGCCGACGTCAGTCTTGAACTTCCAGTGGCAGCAGCTGCCACTGCCACTGCTGCTGCTGTGGTAGCCACAACGGCTGCTGTGAGTAAGCAGTATGAGCAGGTGGATCTAGATGGTGCTTTTTGTGAACCGATGGGTATTTGGGTGAGGGAAAATGATGGGTTGGGAACCATTTTAGAAGGCGAGAGAATATCAGATAGATCAGTTGGGAATGAAAGCACTAAGTCTGATGCTACACTTGATGATGTTGCCGAGTGTGAGATTGCATGGGAGGAAATCACCTTGGGTGAGCGTATCGGACTTGGATCATACGGGGAGGTGTATCGTGGTGACTGGCTCGGAACTGAGGTTGCTGTGAAGAGGTTTCTCGACCAAGATATTTCAGGTGAAATGCTAGAAGAATTCAAAAGTGAGGTGCGGATAATGAAAAGAATTCGTCATCCCAACGTTGTTCTCTTCATGGGAGCTGTGACCCGAGCTCCCAATCTTTCGATCATTACAGAATTTCTTCCTAGAGGTAGTTTGTACAGATTAATTCACAGACATAACAACCAACTCGATGAACGAAAGCGGTTAAAAATGGCCCTTGATGCGGCTCGAGGGATGAATTATTTGCACAACTGCAGTCCGGTCATCGTACACCGTGATTTAAAATCGCCAAATCTTCTTGTCGATAGAAATTGGGTGGTGAAGGTATGTGATTTCGGCTTATCACGGATGAAGCACAGTACATATCTCTCTTCAAAATCAACTGCAGGAACTGCTGAGTGGATGGCTCCGGAGGTGCTAAGAAACGAACCTTCGAACGAAAAATGTGATGTTTTTAGTTATGGGGTGATATTGTGGGAGTTGTCGACTCTTCGACAGCCATGGGAAGGAATGAACCCGATGCAAGTTGTGGGTGCGGTTGGATTCCAACATCGCCGGCTCGACATTCCGGACGACATGGATCCTGCCATCGCAGACATTATAAGCAAATGTTGGCAAACAGATCCAAAACTGAGACCCACATTTGCTGAGATCATGGCTGCTCTAAAGCCATTGCAGAAGCCTATGAACAGCTCTCAATCTCACAGAGCTGCTCGAGTTGCAGAATCCTCTGTCGGGAAGAGTACAAGTACGTAA | 3063 | 44.96 | MKNLLKKLHIVSTQSEDAEGPTSSRTNKFAHSSSPDRLHSRSHHNSEHKPFSGLSNWLNSVTNRHSHSSQSSSHVRGERMEPSDPGSTSGLEVVVDTAKLDSESSNSRDPDIDEEYQIQLALELSAREDPEAVQIEAVKQISLGSCDPVNTPAEVIAYRYWNYNCLSYDDKIMDGFYDLYGVLTESTSDKMPSLVDLQGTPLSDSVTWEAIQVNRAADANLLKLEQMALEIVIKNRSNDLVFADRNLVRQLADLVANQMGGPVGDPEKMTRKWKNLSYTLKATLGSLVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGHQYTGFDDVAMNFVKIDDGREYIVDLMADPGTLIPADAALPRVAYDESNFHPTPSSRDVGSSSSGIGSSFEENADFGTLDKKSAFNNFGSSGKEGDDKVESTSYANVSGPSRSGEGLKKHSDNSKNSSNAEKAQVQDSPGRSYMHTRSPSWTEGVSSPAVRRKKVKDVSQYMIDAAIENPQLAQKLHNVLLESGVVAPPNLFTEIYNDQLDMSNPETKSDEMKKQISSKENSGHNDYNPGQILPPLPQQKGNFRTSPGQPQHVKHADSSGANFPPETREPIGQPILIQSDTAPGKYSRKVPVAAAAAAAAAVVASSMVVAAAKSSADVSLELPVAAAATATAAAVVATTAAVSKQYEQVDLDGAFCEPMGIWVRENDGLGTILEGERISDRSVGNESTKSDATLDDVAECEIAWEEITLGERIGLGSYGEVYRGDWLGTEVAVKRFLDQDISGEMLEEFKSEVRIMKRIRHPNVVLFMGAVTRAPNLSIITEFLPRGSLYRLIHRHNNQLDERKRLKMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDRNWVVKVCDFGLSRMKHSTYLSSKSTAGTAEWMAPEVLRNEPSNEKCDVFSYGVILWELSTLRQPWEGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIISKCWQTDPKLRPTFAEIMAALKPLQKPMNSSQSHRAARVAESSVGKSTST | 1020 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53078072 | 53085122 | - | Bda008734.1 | Bda11g01805 | 16913 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01805 | 1020 | Gene3D | Transferase(Phosphotransferase) domain 1 | 818 | 1005 | - | - | |
Bda11g01805 | 1020 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 1 | 1007 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 49 | 70 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 995 | 1020 | - | - | |
Bda11g01805 | 1020 | CDD | STKc_MAP3K-like | 745 | 991 | - | - | |
Bda11g01805 | 1020 | Gene3D | Phosphorylase Kinase; domain 1 | 732 | 816 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 536 | 552 | - | - | |
Bda11g01805 | 1020 | ProSiteProfiles | Protein kinase domain profile. | 739 | 995 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 570 | 588 | - | - | |
Bda11g01805 | 1020 | PRINTS | Tyrosine kinase catalytic domain signature | 918 | 940 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | PRINTS | Tyrosine kinase catalytic domain signature | 852 | 870 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | PRINTS | Tyrosine kinase catalytic domain signature | 899 | 909 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | PRINTS | Tyrosine kinase catalytic domain signature | 813 | 826 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | PRINTS | Tyrosine kinase catalytic domain signature | 962 | 984 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | SMART | serkin_6 | 739 | 994 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 369 | 389 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 15 | 31 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 534 | 605 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 371 | 389 | - | - | |
Bda11g01805 | 1020 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 858 | 870 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01805 | 1020 | SUPERFAMILY | Protein kinase-like (PK-like) | 723 | 990 | IPR011009 | - | |
Bda11g01805 | 1020 | ProSitePatterns | Protein kinases ATP-binding region signature. | 745 | 766 | IPR017441 | GO:0005524 | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 32 | 48 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 412 | 484 | - | - | |
Bda11g01805 | 1020 | MobiDBLite | consensus disorder prediction | 449 | 477 | - | - | |
Bda11g01805 | 1020 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 1007 | - | - | |
Bda11g01805 | 1020 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 153 | 356 | - | - | |
Bda11g01805 | 1020 | Pfam | Protein tyrosine and serine/threonine kinase | 739 | 991 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00452 | Bda-Chr3:3929099 | Bda11g01805 | Bda-Chr11:53078072 | 8.78E-117 | dispersed | |
Bda11g00804 | Bda-Chr11:7975647 | Bda11g01805 | Bda-Chr11:53078072 | 1.15E-34 | dispersed | |
Bda01g00621 | Bda-Chr1:33212770 | Bda11g01805 | Bda-Chr11:53078072 | 7.86E-20 | transposed | |
Bda08g01026 | Bda-Chr8:21310137 | Bda11g01805 | Bda-Chr11:53078072 | 6.18E-61 | transposed | |
Bda13g00679 | Bda-Chr13:7710190 | Bda11g01805 | Bda-Chr11:53078072 | 5.20E-06 | transposed | |
Bda11g01805 | Bda-Chr11:53078072 | Bda06g00467 | Bda-Chr6:6719315 | 2.66E-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69950 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-68 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01805 | - | - | pper:18776750 | 1371.68 |