Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01809 ATGGCGTTAGTTAGAGAGCGACGACAGCTCAATCTCCGCCTCCCTGACCTTTCTGATCGCCGCCCTCGATTCCCTCTTCAACTTCCTCCGTCCTCCGCTCCATCCTGCCCCTCTTCCACCGCGAACGCCGTCTCCTCCTCCGACCTCGAAAACCTCCATGTTCTCGGCCACGGAAACGGCGGCACCGTTTACAAAGTCCGTCATAAACGAAGCTCAGTTCTTTACGCTCTCAAAGTCATCCATGGCGACTGCGATCCCGTCGTCCGCCGCCAAGTTTTCAGGGAGATGGAAATTCTCCGGCGTACGGACTCGCCTTTCGTCGTCCAGTGCCACGGAATTTTTGAGAAGCCTTCCGGCGACATATCGATATTAATGGAGTATATGGATTCCGGCTCCCTTGATTCGTTCTTGAAATCGAAGAATACCTTATCGGAATCCATTCTTTCCGACGTAGCTCGTCAGGTTCTTCATGGTCTCAATTATCTTCACTCCCACAAAATTATTCATCGCGATATCAAACCATCGAATCTTCTAATCAACAAGAATATGGAGGTCAAAATCGCCGATTTCGGAGTCAGCAAAATTATGTGCAGAACTTTAGACGCCTGCAATTCCTACGTCGGTACGTGCGCTTACATGAGTCCGGAAAGATTTGATCCCGATACATACGGCGGAAACTACAATGGGTACGCCGGCGATATATGGAGCTTAGGACTCACTCTTTTGGAGCTCTATTTGGGTCATTTTCCGTTTCTTCCTCCGGGTCAGAGACCAGATTGGGCGACCCTTATGTGCGCGATTTGCTTCGGAGAGCCTCCGACGTTGCCGGAAAATGCTTCAGAGGAGTTCCGGAGCTTCGTCGAGTGTTGTTTGCAGAAGGAATCAAGCAAGAGGTGGTCGGCGGCGCAGCTCTTAACGCACCCCTTCGTCAGCAAAGAGTCAAGGAAGTGA 951 51.1 MALVRERRQLNLRLPDLSDRRPRFPLQLPPSSAPSCPSSTANAVSSSDLENLHVLGHGNGGTVYKVRHKRSSVLYALKVIHGDCDPVVRRQVFREMEILRRTDSPFVVQCHGIFEKPSGDISILMEYMDSGSLDSFLKSKNTLSESILSDVARQVLHGLNYLHSHKIIHRDIKPSNLLINKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDTYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPPGQRPDWATLMCAICFGEPPTLPENASEEFRSFVECCLQKESSKRWSAAQLLTHPFVSKESRK 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53177394 53178344 - Bda008738.1 Bda11g01809 16917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01809 316 Gene3D Phosphorylase Kinase; domain 1 31 129 - -
Bda11g01809 316 CDD PKc_MAPKK_plant_like 47 312 - -
Bda11g01809 316 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01809 316 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Bda11g01809 316 PRINTS Tyrosine kinase catalytic domain signature 125 138 IPR001245 GO:0004672|GO:0006468
Bda11g01809 316 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Bda11g01809 316 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Bda11g01809 316 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 315 - -
Bda11g01809 316 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01809 316 SUPERFAMILY Protein kinase-like (PK-like) 48 311 IPR011009 -
Bda11g01809 316 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01809 316 Gene3D Transferase(Phosphotransferase) domain 1 131 316 - -
Bda11g01809 316 MobiDBLite consensus disorder prediction 21 43 - -
Bda11g01809 316 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 3 315 - -
Bda11g01809 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01036 Bda-Chr11:10100335 Bda11g01809 Bda-Chr11:53177394 3.47E-69 dispersed
Bda11g01809 Bda-Chr11:53177394 Bda07g00318 Bda-Chr7:4226532 4.64E-40 dispersed
Bda11g01809 Bda-Chr11:53177394 Bda02g00383 Bda-Chr2:44203814 3.08E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69952 PF00069 Pkinase 1.10E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01809 K20604 - csv:101203133 528.48