Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01809 | ATGGCGTTAGTTAGAGAGCGACGACAGCTCAATCTCCGCCTCCCTGACCTTTCTGATCGCCGCCCTCGATTCCCTCTTCAACTTCCTCCGTCCTCCGCTCCATCCTGCCCCTCTTCCACCGCGAACGCCGTCTCCTCCTCCGACCTCGAAAACCTCCATGTTCTCGGCCACGGAAACGGCGGCACCGTTTACAAAGTCCGTCATAAACGAAGCTCAGTTCTTTACGCTCTCAAAGTCATCCATGGCGACTGCGATCCCGTCGTCCGCCGCCAAGTTTTCAGGGAGATGGAAATTCTCCGGCGTACGGACTCGCCTTTCGTCGTCCAGTGCCACGGAATTTTTGAGAAGCCTTCCGGCGACATATCGATATTAATGGAGTATATGGATTCCGGCTCCCTTGATTCGTTCTTGAAATCGAAGAATACCTTATCGGAATCCATTCTTTCCGACGTAGCTCGTCAGGTTCTTCATGGTCTCAATTATCTTCACTCCCACAAAATTATTCATCGCGATATCAAACCATCGAATCTTCTAATCAACAAGAATATGGAGGTCAAAATCGCCGATTTCGGAGTCAGCAAAATTATGTGCAGAACTTTAGACGCCTGCAATTCCTACGTCGGTACGTGCGCTTACATGAGTCCGGAAAGATTTGATCCCGATACATACGGCGGAAACTACAATGGGTACGCCGGCGATATATGGAGCTTAGGACTCACTCTTTTGGAGCTCTATTTGGGTCATTTTCCGTTTCTTCCTCCGGGTCAGAGACCAGATTGGGCGACCCTTATGTGCGCGATTTGCTTCGGAGAGCCTCCGACGTTGCCGGAAAATGCTTCAGAGGAGTTCCGGAGCTTCGTCGAGTGTTGTTTGCAGAAGGAATCAAGCAAGAGGTGGTCGGCGGCGCAGCTCTTAACGCACCCCTTCGTCAGCAAAGAGTCAAGGAAGTGA | 951 | 51.1 | MALVRERRQLNLRLPDLSDRRPRFPLQLPPSSAPSCPSSTANAVSSSDLENLHVLGHGNGGTVYKVRHKRSSVLYALKVIHGDCDPVVRRQVFREMEILRRTDSPFVVQCHGIFEKPSGDISILMEYMDSGSLDSFLKSKNTLSESILSDVARQVLHGLNYLHSHKIIHRDIKPSNLLINKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDTYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPPGQRPDWATLMCAICFGEPPTLPENASEEFRSFVECCLQKESSKRWSAAQLLTHPFVSKESRK | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53177394 | 53178344 | - | Bda008738.1 | Bda11g01809 | 16917 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01809 | 316 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 129 | - | - | |
Bda11g01809 | 316 | CDD | PKc_MAPKK_plant_like | 47 | 312 | - | - | |
Bda11g01809 | 316 | ProSiteProfiles | Protein kinase domain profile. | 49 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01809 | 316 | PRINTS | Tyrosine kinase catalytic domain signature | 161 | 179 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01809 | 316 | PRINTS | Tyrosine kinase catalytic domain signature | 125 | 138 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01809 | 316 | PRINTS | Tyrosine kinase catalytic domain signature | 232 | 254 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01809 | 316 | ProSitePatterns | Protein kinases ATP-binding region signature. | 55 | 78 | IPR017441 | GO:0005524 | |
Bda11g01809 | 316 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 3 | 315 | - | - | |
Bda11g01809 | 316 | Pfam | Protein kinase domain | 50 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01809 | 316 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 311 | IPR011009 | - | |
Bda11g01809 | 316 | SMART | serkin_6 | 49 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01809 | 316 | Gene3D | Transferase(Phosphotransferase) domain 1 | 131 | 316 | - | - | |
Bda11g01809 | 316 | MobiDBLite | consensus disorder prediction | 21 | 43 | - | - | |
Bda11g01809 | 316 | PANTHER | SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED | 3 | 315 | - | - | |
Bda11g01809 | 316 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01036 | Bda-Chr11:10100335 | Bda11g01809 | Bda-Chr11:53177394 | 3.47E-69 | dispersed | |
Bda11g01809 | Bda-Chr11:53177394 | Bda07g00318 | Bda-Chr7:4226532 | 4.64E-40 | dispersed | |
Bda11g01809 | Bda-Chr11:53177394 | Bda02g00383 | Bda-Chr2:44203814 | 3.08E-69 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69952 | PF00069 | Pkinase | 1.10E-64 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01809 | K20604 | - | csv:101203133 | 528.48 |