Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01811 ATGAAGTGGGAAAACCCAGAAGAATTTCATCCCCGCCCTTATCGGCCACTGCGAGAAGACGGTTCACAGATGGAGGAACCTCAAAATGGCAATGGGGACGGTGGGGTTTTGTACTTGAAGGTGATGACTGACGAGCAATTGGAGACACTTCGCAAGCAAATCGCTGTTTACGCTTCCATTTGCGAGCAGCTCGTGGAGATGCATAAAACCCTTACGTCCCAGCAGGATCCTTCAGCCACTGTTGTAATTTATTGCTCTCTTATTTTATTTCCAGGAATCAGGCTTGGTAGTTTATATTGTGAGCCATTAATGGCTTCCTCTGGCCCCAAAATCACTTCAAGACAGCGATGGAATCCAACCCCTGTTCAGCTTCAGATTCTTGAGCGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGCAGAAAATAAAAGAGATAACATCCGAATTGAGCCAGCATGGCCAAATTTCTGAAACAAATGTCTACAATTGGTTCCAGAACAGGCGAGCTCGATCAAAGAGGAAACAACAAACTTCAGCCCCAGGTAATGCTGAATCAGAAGCTGAGACTGAAAACGAGTCGCCTAATGAAAACGAGACGGGACGAATGGATTTTCAAACCAAACAGAACAACTCCACATCCATGGCTGATGATCTGAGATTCCAGATCACTGAGAGCGGCTCTGCTTTTCCTTTTTTAGATGGAAGAAGCAACAAAGCAGAGATTTTATTTCCCTCCAATGGAACCATGGAAAATGGGAGAAATTTGGGTCAAATGTCGTTTTACGAGGGTATGTTCAAGTGA 804 44.53 MKWENPEEFHPRPYRPLREDGSQMEEPQNGNGDGGVLYLKVMTDEQLETLRKQIAVYASICEQLVEMHKTLTSQQDPSATVVIYCSLILFPGIRLGSLYCEPLMASSGPKITSRQRWNPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQQTSAPGNAESEAETENESPNENETGRMDFQTKQNNSTSMADDLRFQITESGSAFPFLDGRSNKAEILFPSNGTMENGRNLGQMSFYEGMFK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53266261 53267384 + Bda008740.1 Bda11g01811 16919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01811 267 ProSiteProfiles 'Homeobox' domain profile. 110 175 IPR001356 GO:0003677
Bda11g01811 267 SMART HOX_1 112 179 IPR001356 GO:0003677
Bda11g01811 267 Pfam Homeodomain 114 174 IPR001356 GO:0003677
Bda11g01811 267 CDD homeodomain 114 176 IPR001356 GO:0003677
Bda11g01811 267 PANTHER - 21 266 - -
Bda11g01811 267 MobiDBLite consensus disorder prediction 168 204 - -
Bda11g01811 267 MobiDBLite consensus disorder prediction 1 22 - -
Bda11g01811 267 MobiDBLite consensus disorder prediction 1 33 - -
Bda11g01811 267 PANTHER WUSCHEL-RELATED HOMEOBOX 13 21 266 IPR044559 GO:0003700
Bda11g01811 267 SUPERFAMILY Homeodomain-like 112 177 IPR009057 -
Bda11g01811 267 Gene3D - 116 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00324 Bda-Chr3:2762501 Bda11g01811 Bda-Chr11:53266261 1.23E-74 dispersed
Bda11g00976 Bda-Chr11:9505207 Bda11g01811 Bda-Chr11:53266261 4.66E-87 dispersed
Bda11g01811 Bda-Chr11:53266261 Bda15g00511 Bda-Chr15:8179700 5.01E-14 dispersed
Bda11g01802 Bda-Chr11:53062380 Bda11g01811 Bda-Chr11:53266261 1.93E-15 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16733 PF00046 Homeodomain 1.70E-18 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01811 - - qsu:112005537 311.997