Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01811 | ATGAAGTGGGAAAACCCAGAAGAATTTCATCCCCGCCCTTATCGGCCACTGCGAGAAGACGGTTCACAGATGGAGGAACCTCAAAATGGCAATGGGGACGGTGGGGTTTTGTACTTGAAGGTGATGACTGACGAGCAATTGGAGACACTTCGCAAGCAAATCGCTGTTTACGCTTCCATTTGCGAGCAGCTCGTGGAGATGCATAAAACCCTTACGTCCCAGCAGGATCCTTCAGCCACTGTTGTAATTTATTGCTCTCTTATTTTATTTCCAGGAATCAGGCTTGGTAGTTTATATTGTGAGCCATTAATGGCTTCCTCTGGCCCCAAAATCACTTCAAGACAGCGATGGAATCCAACCCCTGTTCAGCTTCAGATTCTTGAGCGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGCAGAAAATAAAAGAGATAACATCCGAATTGAGCCAGCATGGCCAAATTTCTGAAACAAATGTCTACAATTGGTTCCAGAACAGGCGAGCTCGATCAAAGAGGAAACAACAAACTTCAGCCCCAGGTAATGCTGAATCAGAAGCTGAGACTGAAAACGAGTCGCCTAATGAAAACGAGACGGGACGAATGGATTTTCAAACCAAACAGAACAACTCCACATCCATGGCTGATGATCTGAGATTCCAGATCACTGAGAGCGGCTCTGCTTTTCCTTTTTTAGATGGAAGAAGCAACAAAGCAGAGATTTTATTTCCCTCCAATGGAACCATGGAAAATGGGAGAAATTTGGGTCAAATGTCGTTTTACGAGGGTATGTTCAAGTGA | 804 | 44.53 | MKWENPEEFHPRPYRPLREDGSQMEEPQNGNGDGGVLYLKVMTDEQLETLRKQIAVYASICEQLVEMHKTLTSQQDPSATVVIYCSLILFPGIRLGSLYCEPLMASSGPKITSRQRWNPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQQTSAPGNAESEAETENESPNENETGRMDFQTKQNNSTSMADDLRFQITESGSAFPFLDGRSNKAEILFPSNGTMENGRNLGQMSFYEGMFK | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53266261 | 53267384 | + | Bda008740.1 | Bda11g01811 | 16919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01811 | 267 | ProSiteProfiles | 'Homeobox' domain profile. | 110 | 175 | IPR001356 | GO:0003677 | |
Bda11g01811 | 267 | SMART | HOX_1 | 112 | 179 | IPR001356 | GO:0003677 | |
Bda11g01811 | 267 | Pfam | Homeodomain | 114 | 174 | IPR001356 | GO:0003677 | |
Bda11g01811 | 267 | CDD | homeodomain | 114 | 176 | IPR001356 | GO:0003677 | |
Bda11g01811 | 267 | PANTHER | - | 21 | 266 | - | - | |
Bda11g01811 | 267 | MobiDBLite | consensus disorder prediction | 168 | 204 | - | - | |
Bda11g01811 | 267 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bda11g01811 | 267 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Bda11g01811 | 267 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 21 | 266 | IPR044559 | GO:0003700 | |
Bda11g01811 | 267 | SUPERFAMILY | Homeodomain-like | 112 | 177 | IPR009057 | - | |
Bda11g01811 | 267 | Gene3D | - | 116 | 180 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00324 | Bda-Chr3:2762501 | Bda11g01811 | Bda-Chr11:53266261 | 1.23E-74 | dispersed | |
Bda11g00976 | Bda-Chr11:9505207 | Bda11g01811 | Bda-Chr11:53266261 | 4.66E-87 | dispersed | |
Bda11g01811 | Bda-Chr11:53266261 | Bda15g00511 | Bda-Chr15:8179700 | 5.01E-14 | dispersed | |
Bda11g01802 | Bda-Chr11:53062380 | Bda11g01811 | Bda-Chr11:53266261 | 1.93E-15 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16733 | PF00046 | Homeodomain | 1.70E-18 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01811 | - | - | qsu:112005537 | 311.997 |