Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01812 ATGTCGTCGCTGGATTCAAATTATGACGACGACGACGACGGCTCCTTGTCGGAACCCACCGTGTGTGACCAACCGCCGATTCTTCTCGTGGCGGAACCCTCGACTGAACCATCGCCCTCATCGACCGAATCTGACCTTGAAGAGAAGCCTACTAGTACTTCATCTCCATTGTCAAAATCTGCTCCTCCGACTCCTTCCGAGATCCCTCTCTCGTGGCCATCCGATGGTAAGCTTAGCATCCAATGGATTCTCAATTTAATTGCCTCCTTCGAATGGTCTTCCAGAAATTTGCCTCCCTCCGGTTTTCCCTCTGTTCTTCCGGTTTCTGTGTTTGATACTCTGGTTCTCGCTGCCTCTAAGATTCTTCACAAGGAACCTAATTGCCTGACAATTCTTGACGATTTTGTCGAAAGTAGCACCGATGCGGTTGTGGTGGTCGTTGGAGATATTCACGGCCAGTTGCATGATCTCCTCTTTCTCTTTCAAGACGCAGGCTTTCCTTCTGAAAACCGCTTCTTTGTCTTCAATGGCGATTACGTTGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGATTTTATTGGCTTGGAAGGTTTTTTTGCCACATCGAGTATTTCTTCTTCGAGGAAACCATGAATCGAAGTATTGCACATCTGTTTATGGGTTTGAAAAGGAAGTGCTGGAAAAATATGGAGATAAAGGTAAACATGTTTATCGAAAGTGTTTGGGATGCTTTGAAGGGCTGCCTTTGGCCTCCATCATCGCTGGAAATGTTTATACGGCTCATGGGGGGCTTTTCCGCAGTGTAACAGTGCCCACATCAAAGAGATCAAAAGGAAAGAAGAATCGTAAAATAATCGTGAATTCTGAAGCTAACGCTATATCTCTTGGTTCTTTGGAAGAACTGCAGAAGGCTAGGCGATCGGTTCTTGATCCTCCGTGGGAAGGTTTAAATTTGATTCCTGGCGATGTTCTTTGGTCTGATCCATCAATGAATCCTGGTCTTTCTCCAAATAAAGAGAGAGGCATAGGCTTGTTGTGGGGCCCTGATTGCACTGAAGAGTTCTTGAAGAAATTTCAAGTAAAGTTGATTATTAGATCTCATGAAGGTCCTGACGCTCGAGAAAAGAGGCCGGGTCTTTCAGGAATGCAAGAAGGCTACACCATAGATCATGTTGTTGAGTCAGGGAAGCTAATTACTTTGTTCAGTGCTCCAGACTACCCTCAGTTTCAGGCTTCCGAGGAAAGGTACAAAAACAAAGGTGCATATATTGTTTTGGAGGCCCCAAGTTTTGATGTTCCGGTATTTCATAGTTTTGAAGCAGTCAGTCCTAGGCCGAAGGCACATCCCTATTATGACTATGTAGATGTAATCGATTCGGACGAAGAGTTGGACTTGACATCGATGGTAACCGATCCATCGACGGTAACATAA 1434 45.19 MSSLDSNYDDDDDGSLSEPTVCDQPPILLVAEPSTEPSPSSTESDLEEKPTSTSSPLSKSAPPTPSEIPLSWPSDGKLSIQWILNLIASFEWSSRNLPPSGFPSVLPVSVFDTLVLAASKILHKEPNCLTILDDFVESSTDAVVVVVGDIHGQLHDLLFLFQDAGFPSENRFFVFNGDYVDRGAWGLETFLILLAWKVFLPHRVFLLRGNHESKYCTSVYGFEKEVLEKYGDKGKHVYRKCLGCFEGLPLASIIAGNVYTAHGGLFRSVTVPTSKRSKGKKNRKIIVNSEANAISLGSLEELQKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKFQVKLIIRSHEGPDAREKRPGLSGMQEGYTIDHVVESGKLITLFSAPDYPQFQASEERYKNKGAYIVLEAPSFDVPVFHSFEAVSPRPKAHPYYDYVDVIDSDEELDLTSMVTDPSTVT 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53268961 53272472 + Bda008741.1 Bda11g01812 16920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01812 477 MobiDBLite consensus disorder prediction 34 61 - -
Bda11g01812 477 Gene3D - 103 466 IPR029052 -
Bda11g01812 477 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 469 - -
Bda11g01812 477 MobiDBLite consensus disorder prediction 1 70 - -
Bda11g01812 477 CDD MPP_PP7 72 453 IPR041754 -
Bda11g01812 477 SUPERFAMILY Metallo-dependent phosphatases 103 453 IPR029052 -
Bda11g01812 477 SMART pp2a_7 106 443 IPR006186 GO:0016787
Bda11g01812 477 MobiDBLite consensus disorder prediction 1 17 - -
Bda11g01812 477 Pfam Calcineurin-like phosphoesterase 144 371 IPR004843 GO:0016787
Bda11g01812 477 ProSitePatterns Serine/threonine specific protein phosphatases signature. 207 212 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 206 230 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 303 330 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 173 200 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 243 269 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 143 170 IPR006186 GO:0016787
Bda11g01812 477 PRINTS Serine/threonine phosphatase family signature 397 413 IPR006186 GO:0016787
Bda11g01812 477 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 48 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01812 Bda-Chr11:53268961 Bda14g00302 Bda-Chr14:2032340 3.40E-44 dispersed
Bda11g01812 Bda-Chr11:53268961 Bda11g00627 Bda-Chr11:6299714 1.94E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01812 K04460 - csv:116402510 738.799