Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01814 | ATGGGATTCTCCAACGAAAACTTGATCAAACCCACCCATATCCCAGGAAGAAAGGTTGGGCAAAAGGTAGGCCAAAAAAGGAGGGCTTTAAGCGTTATTGATCAGAATTTAGTGGGAGGTCATGCATACGATTGTGTTGTTAGCAAGAGAGACGTTTCTGGGAAGCCGGCTTCAAAGATTGCAAACACGGAAAAACATGTAGCTCAGGAATCTAACAAGCCAGACCCCAGTGGATTTGGAGATTTCATTTTTATAGACGAAGAATGTAAGTCCCCCATTGACGACCAGCCAGTTCCCATGTTCTTAGAAGACTCAGAAGCAGTGCTTGATGAGGAAAAGACTCAGATGGAGGAGGTTGAAATGGAGGATGTAGAGGAGGAGCATATTTCTGACATCGACAGCTGCGATGCGAAGAATCCACTTGCAGCCGTCGATTATGTCGACGATCTATATGCATATTATAGAAAGATGGAGTGTTTTAGCTGTGTTTCACCAAACTACATGGCCCAACAATCTGATATCAATGAAAAAATGAGAGCCATTTTGATTGATTGGCTAATTGAGGTGCACGATAAGTTCGAGCTGATGAGCGAGACATTATATCTCACAGTGAATGTAATAGATAGATTTTTGGCCCACCAAAAGGTTGCAAGAAGGAAGCTTCAACTGGTGGGGTTGGTTGCCATGCTCCTGGCCTGCAAATACGAGGAAGTGTCGGTTCCGGTGGTGAGCGATTTGATAGTTATATCGGACAACGCTTACTCTAGAAAAGAAGTAATCGAAATGGAGACTTTGATGCTAAATACACTACAATTCAATATGTCGGTCCCAACGCCTTATGTTTTCATGCGAAGATATCTCAAGGCTGCTCAATCTGACAAAAAGGTGGAGCTATTATCCTTCTTCTTGCTGGAGCTTTGTCTGGTGGAATATGCAATGGTCAAATACCCACCATCTTTATTAGCTGCTTCTGCAATATACACTGCTCAGTCCGGTCTAGACGGGTACCCGCGATGGAGCAGGACTTGCGAGCGGCATTCGAGCTATTCACAGGAGGAGCTACTGGAATGTTCAAGAATGATGATAGGATTTCATCAAAATGCAGGAACTGGGAAATTAAGGGCAGTGCATAGTAAGTATGGTACATCCAAGATGGAGTATATTTCGAAAAATGAAGCAGCTGTCCTCAATCACAGTGACAAGTAA | 1206 | 43.53 | MGFSNENLIKPTHIPGRKVGQKVGQKRRALSVIDQNLVGGHAYDCVVSKRDVSGKPASKIANTEKHVAQESNKPDPSGFGDFIFIDEECKSPIDDQPVPMFLEDSEAVLDEEKTQMEEVEMEDVEEEHISDIDSCDAKNPLAAVDYVDDLYAYYRKMECFSCVSPNYMAQQSDINEKMRAILIDWLIEVHDKFELMSETLYLTVNVIDRFLAHQKVARRKLQLVGLVAMLLACKYEEVSVPVVSDLIVISDNAYSRKEVIEMETLMLNTLQFNMSVPTPYVFMRRYLKAAQSDKKVELLSFFLLELCLVEYAMVKYPPSLLAASAIYTAQSGLDGYPRWSRTCERHSSYSQEELLECSRMMIGFHQNAGTGKLRAVHSKYGTSKMEYISKNEAAVLNHSDK | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53300178 | 53302482 | + | Bda008744.1 | Bda11g01814 | 16922 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01814 | 401 | CDD | CYCLIN | 275 | 361 | IPR013763 | - | |
Bda11g01814 | 401 | Coils | Coil | 102 | 122 | - | - | |
Bda11g01814 | 401 | PANTHER | CYCLINS | 60 | 396 | IPR039361 | - | |
Bda11g01814 | 401 | SUPERFAMILY | Cyclin-like | 138 | 274 | IPR036915 | - | |
Bda11g01814 | 401 | Gene3D | - | 163 | 275 | - | - | |
Bda11g01814 | 401 | Pfam | Cyclin, C-terminal domain | 277 | 390 | IPR004367 | - | |
Bda11g01814 | 401 | MobiDBLite | consensus disorder prediction | 56 | 75 | - | - | |
Bda11g01814 | 401 | Pfam | Cyclin, N-terminal domain | 149 | 275 | IPR006671 | - | |
Bda11g01814 | 401 | SMART | Cyclin_C_2 | 277 | 394 | IPR004367 | - | |
Bda11g01814 | 401 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda11g01814 | 401 | SUPERFAMILY | Cyclin-like | 276 | 391 | IPR036915 | - | |
Bda11g01814 | 401 | SMART | cyclin_7 | 184 | 268 | IPR013763 | - | |
Bda11g01814 | 401 | SMART | cyclin_7 | 281 | 363 | IPR013763 | - | |
Bda11g01814 | 401 | Gene3D | - | 149 | 390 | - | - | |
Bda11g01814 | 401 | ProSitePatterns | Cyclins signature. | 179 | 210 | IPR006671 | - | |
Bda11g01814 | 401 | CDD | CYCLIN | 178 | 267 | IPR013763 | - | |
Bda11g01814 | 401 | PANTHER | CYCLIN-B2-1 | 60 | 396 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g00971 | Bda-Chr11:9465763 | Bda11g01814 | Bda-Chr11:53300178 | 2.23E-127 | dispersed | |
Bda11g01814 | Bda-Chr11:53300178 | Bda01g00725 | Bda-Chr1:34532308 | 5.83E-57 | dispersed | |
Bda11g01814 | Bda-Chr11:53300178 | Bda11g00693 | Bda-Chr11:6914682 | 2.55E-77 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01814 | K21777 | - | jre:109014130 | 498.434 |