Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01814 ATGGGATTCTCCAACGAAAACTTGATCAAACCCACCCATATCCCAGGAAGAAAGGTTGGGCAAAAGGTAGGCCAAAAAAGGAGGGCTTTAAGCGTTATTGATCAGAATTTAGTGGGAGGTCATGCATACGATTGTGTTGTTAGCAAGAGAGACGTTTCTGGGAAGCCGGCTTCAAAGATTGCAAACACGGAAAAACATGTAGCTCAGGAATCTAACAAGCCAGACCCCAGTGGATTTGGAGATTTCATTTTTATAGACGAAGAATGTAAGTCCCCCATTGACGACCAGCCAGTTCCCATGTTCTTAGAAGACTCAGAAGCAGTGCTTGATGAGGAAAAGACTCAGATGGAGGAGGTTGAAATGGAGGATGTAGAGGAGGAGCATATTTCTGACATCGACAGCTGCGATGCGAAGAATCCACTTGCAGCCGTCGATTATGTCGACGATCTATATGCATATTATAGAAAGATGGAGTGTTTTAGCTGTGTTTCACCAAACTACATGGCCCAACAATCTGATATCAATGAAAAAATGAGAGCCATTTTGATTGATTGGCTAATTGAGGTGCACGATAAGTTCGAGCTGATGAGCGAGACATTATATCTCACAGTGAATGTAATAGATAGATTTTTGGCCCACCAAAAGGTTGCAAGAAGGAAGCTTCAACTGGTGGGGTTGGTTGCCATGCTCCTGGCCTGCAAATACGAGGAAGTGTCGGTTCCGGTGGTGAGCGATTTGATAGTTATATCGGACAACGCTTACTCTAGAAAAGAAGTAATCGAAATGGAGACTTTGATGCTAAATACACTACAATTCAATATGTCGGTCCCAACGCCTTATGTTTTCATGCGAAGATATCTCAAGGCTGCTCAATCTGACAAAAAGGTGGAGCTATTATCCTTCTTCTTGCTGGAGCTTTGTCTGGTGGAATATGCAATGGTCAAATACCCACCATCTTTATTAGCTGCTTCTGCAATATACACTGCTCAGTCCGGTCTAGACGGGTACCCGCGATGGAGCAGGACTTGCGAGCGGCATTCGAGCTATTCACAGGAGGAGCTACTGGAATGTTCAAGAATGATGATAGGATTTCATCAAAATGCAGGAACTGGGAAATTAAGGGCAGTGCATAGTAAGTATGGTACATCCAAGATGGAGTATATTTCGAAAAATGAAGCAGCTGTCCTCAATCACAGTGACAAGTAA 1206 43.53 MGFSNENLIKPTHIPGRKVGQKVGQKRRALSVIDQNLVGGHAYDCVVSKRDVSGKPASKIANTEKHVAQESNKPDPSGFGDFIFIDEECKSPIDDQPVPMFLEDSEAVLDEEKTQMEEVEMEDVEEEHISDIDSCDAKNPLAAVDYVDDLYAYYRKMECFSCVSPNYMAQQSDINEKMRAILIDWLIEVHDKFELMSETLYLTVNVIDRFLAHQKVARRKLQLVGLVAMLLACKYEEVSVPVVSDLIVISDNAYSRKEVIEMETLMLNTLQFNMSVPTPYVFMRRYLKAAQSDKKVELLSFFLLELCLVEYAMVKYPPSLLAASAIYTAQSGLDGYPRWSRTCERHSSYSQEELLECSRMMIGFHQNAGTGKLRAVHSKYGTSKMEYISKNEAAVLNHSDK 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53300178 53302482 + Bda008744.1 Bda11g01814 16922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01814 401 CDD CYCLIN 275 361 IPR013763 -
Bda11g01814 401 Coils Coil 102 122 - -
Bda11g01814 401 PANTHER CYCLINS 60 396 IPR039361 -
Bda11g01814 401 SUPERFAMILY Cyclin-like 138 274 IPR036915 -
Bda11g01814 401 Gene3D - 163 275 - -
Bda11g01814 401 Pfam Cyclin, C-terminal domain 277 390 IPR004367 -
Bda11g01814 401 MobiDBLite consensus disorder prediction 56 75 - -
Bda11g01814 401 Pfam Cyclin, N-terminal domain 149 275 IPR006671 -
Bda11g01814 401 SMART Cyclin_C_2 277 394 IPR004367 -
Bda11g01814 401 MobiDBLite consensus disorder prediction 1 21 - -
Bda11g01814 401 SUPERFAMILY Cyclin-like 276 391 IPR036915 -
Bda11g01814 401 SMART cyclin_7 184 268 IPR013763 -
Bda11g01814 401 SMART cyclin_7 281 363 IPR013763 -
Bda11g01814 401 Gene3D - 149 390 - -
Bda11g01814 401 ProSitePatterns Cyclins signature. 179 210 IPR006671 -
Bda11g01814 401 CDD CYCLIN 178 267 IPR013763 -
Bda11g01814 401 PANTHER CYCLIN-B2-1 60 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00971 Bda-Chr11:9465763 Bda11g01814 Bda-Chr11:53300178 2.23E-127 dispersed
Bda11g01814 Bda-Chr11:53300178 Bda01g00725 Bda-Chr1:34532308 5.83E-57 dispersed
Bda11g01814 Bda-Chr11:53300178 Bda11g00693 Bda-Chr11:6914682 2.55E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01814 K21777 - jre:109014130 498.434