Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01817 ATGGCAATTGAAGAAGACATTGAGAGCTGTGGTAGTAGACCATCGCAATCATCGCAGGGAGCCCCTCGCCAACAGAGACAGAAACTCGAGGTGTATAGCGAGGTGCTTATTAGAATTCAGGAATCGAATCACGAAGAGGCGAATCTTCCTGGATTTGATGATCAACTTTGGCTCCATTTCAATCGCCTTCCCGCCAGATATGCATTGGATGTGAACGTTGAGAGAGCAGAAGATGTGCTCACACATAAGAGACTACTTCAGTTGGCTGAAGACCCTAATAGACCTATTGCATTTGAAATTCGTCCCGTGCAGGTTTATCCTGCTGCCAATGGAAACTCTCCTGATTATGTCCATTCAGATTCTTCAATGAGAGAAGATGCTCAAAGCTCTTTTAACTATTCTAGTAGACATGGAAGTCATCCGCCACCTACATTTGGTTCTTCACCAAATCTTGAAGTACTTGCCCTGCAAGCTAAAAATTATATTGAAGACAGAGATGATGTAGAGAAAAATGATAGTGCTTTGAGTATGACACCTTGTTTTCCTAAACCTATGCACGAGATTACATTTGCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACATCGTTACTTGCTGAAATTGGACTTAACATACAAGAAGCTCATGCTTTCTCAACTGTAGACGGATTCTCTTTGGATGTTTTTGTTGTTGATGGTTGGCAAAGTGAGGAAACTGAGAAGCTTAAAAGTGCAATAGAGAAGGAGTTAATAAATTTTCAGGAGCATTCTTGGTTAAGACAGAATTCTTCCTCTGCTAATGCGGAGCCCAATCAAACAAGAACAGAAGGTTTTCCTAATCCTGTTGAAATACCCACTGATGAGACCAATGTCTGGGAAATTGATACAAGATGGCTAAAATTTGAAAATAAAGTTGGATCTGGGTCATTTGGGGACTTGTATCGTGGAACATATTGCAGTCAGGAAGTGGCTATTAAAATCTTAAAGCCTGAAAGAATCAATGGAGAGATGCTGAAAGAATTTTCTCAGGAAGTTTATATTTTGAGGAAAATTCGTCACAAGAATGTTGTCCAATTTATTGGTGCTTGCACTAGACCTCCGAATCTATGTATTGTGACGGAATTTATGTCAAGAGGAAGCGTATACGACTTTCTTCATAAACAAAGAGGCATTTTTATGCTTCCTACTTTACTTAAAGTAGCATCTGATGTTTCGAAGGGGATGAACTATTTGCACCAAAACAAAATAATCCACAGAGATCTCAAGACTGCAAATCTTCTAATGAATGAAAACCAGGTTGTTAAGGTGGCTGATTTTGGGGTGGCCAGAGTACAGGCGCAGTCTGGGGTGATGACTGCTGAAACTGGAACATATCGTTGGATGGCTCCCGAGATCATTGAGCATAAGCCATACGATCACAAAGCAGATGTCTTCAGCTTTGGAATATCAATATGGGAGCTTCTAACTGGTGAAATTCCATACTCATACTTGACCCCATTGCAAGCAGCAGTTGGTGTGGTTCAGAAGGGACTAAGGCCTACGATCCCCAAAAATACGCATCCAAGACTCGCGGAATTGCTTGAGAGATGCTGGCAACAAGATCCAACTCAAAGACCAGATTTCTCTGAAATTCTCGAAATTCTTCAGCAAATAAGCGAGCAGATCGAAATTGAGGGGGACGACGGGAGCAAGAAGAACAGATCATCAGGTGGCATATTTTCTGCACTGAAATGGGGACACCATTGA 1749 41.34 MAIEEDIESCGSRPSQSSQGAPRQQRQKLEVYSEVLIRIQESNHEEANLPGFDDQLWLHFNRLPARYALDVNVERAEDVLTHKRLLQLAEDPNRPIAFEIRPVQVYPAANGNSPDYVHSDSSMREDAQSSFNYSSRHGSHPPPTFGSSPNLEVLALQAKNYIEDRDDVEKNDSALSMTPCFPKPMHEITFATIDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWQSEETEKLKSAIEKELINFQEHSWLRQNSSSANAEPNQTRTEGFPNPVEIPTDETNVWEIDTRWLKFENKVGSGSFGDLYRGTYCSQEVAIKILKPERINGEMLKEFSQEVYILRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSVYDFLHKQRGIFMLPTLLKVASDVSKGMNYLHQNKIIHRDLKTANLLMNENQVVKVADFGVARVQAQSGVMTAETGTYRWMAPEIIEHKPYDHKADVFSFGISIWELLTGEIPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRLAELLERCWQQDPTQRPDFSEILEILQQISEQIEIEGDDGSKKNRSSGGIFSALKWGHH 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53342819 53349303 - Bda008748.1 Bda11g01817 16925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01817 582 CDD STKc_MAP3K-like 306 549 - -
Bda11g01817 582 MobiDBLite consensus disorder prediction 114 149 - -
Bda11g01817 582 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 566 - -
Bda11g01817 582 ProSiteProfiles ACT domain profile. 187 262 IPR002912 -
Bda11g01817 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Bda11g01817 582 MobiDBLite consensus disorder prediction 1 27 - -
Bda11g01817 582 MobiDBLite consensus disorder prediction 263 280 - -
Bda11g01817 582 MobiDBLite consensus disorder prediction 111 149 - -
Bda11g01817 582 Pfam Protein tyrosine and serine/threonine kinase 300 549 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 Gene3D Phosphorylase Kinase; domain 1 289 378 - -
Bda11g01817 582 SMART serkin_6 300 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01817 582 SUPERFAMILY ACT-like 185 249 IPR045865 -
Bda11g01817 582 Coils Coil 151 171 - -
Bda11g01817 582 CDD ACT_TyrKc 185 251 - -
Bda11g01817 582 ProSiteProfiles Protein kinase domain profile. 300 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01817 582 ProSitePatterns Protein kinases ATP-binding region signature. 306 327 IPR017441 GO:0005524
Bda11g01817 582 MobiDBLite consensus disorder prediction 263 283 - -
Bda11g01817 582 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 566 - -
Bda11g01817 582 Gene3D Transferase(Phosphotransferase) domain 1 379 571 - -
Bda11g01817 582 PRINTS Tyrosine kinase catalytic domain signature 457 467 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 PRINTS Tyrosine kinase catalytic domain signature 411 429 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 PRINTS Tyrosine kinase catalytic domain signature 476 498 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 PRINTS Tyrosine kinase catalytic domain signature 374 387 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 PRINTS Tyrosine kinase catalytic domain signature 520 542 IPR001245 GO:0004672|GO:0006468
Bda11g01817 582 SUPERFAMILY Protein kinase-like (PK-like) 276 549 IPR011009 -
Bda11g01817 582 MobiDBLite consensus disorder prediction 10 26 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00737 Bda11g01817 CCT
Bda06g00737 Bda11g01817 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00125 Bda-Chr9:2075492 Bda11g01817 Bda-Chr11:53342819 8.01E-51 dispersed
Bda11g01817 Bda-Chr11:53342819 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda10g00776 Bda-Chr10:42194225 Bda11g01817 Bda-Chr11:53342819 3.58E-23 transposed
Bda01g00467 Bda-Chr1:31775580 Bda11g01817 Bda-Chr11:53342819 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69953 PF07714 PK_Tyr_Ser-Thr 6.30E-73 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01817 - - mcha:111014825 872.078