Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01817 | ATGGCAATTGAAGAAGACATTGAGAGCTGTGGTAGTAGACCATCGCAATCATCGCAGGGAGCCCCTCGCCAACAGAGACAGAAACTCGAGGTGTATAGCGAGGTGCTTATTAGAATTCAGGAATCGAATCACGAAGAGGCGAATCTTCCTGGATTTGATGATCAACTTTGGCTCCATTTCAATCGCCTTCCCGCCAGATATGCATTGGATGTGAACGTTGAGAGAGCAGAAGATGTGCTCACACATAAGAGACTACTTCAGTTGGCTGAAGACCCTAATAGACCTATTGCATTTGAAATTCGTCCCGTGCAGGTTTATCCTGCTGCCAATGGAAACTCTCCTGATTATGTCCATTCAGATTCTTCAATGAGAGAAGATGCTCAAAGCTCTTTTAACTATTCTAGTAGACATGGAAGTCATCCGCCACCTACATTTGGTTCTTCACCAAATCTTGAAGTACTTGCCCTGCAAGCTAAAAATTATATTGAAGACAGAGATGATGTAGAGAAAAATGATAGTGCTTTGAGTATGACACCTTGTTTTCCTAAACCTATGCACGAGATTACATTTGCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACATCGTTACTTGCTGAAATTGGACTTAACATACAAGAAGCTCATGCTTTCTCAACTGTAGACGGATTCTCTTTGGATGTTTTTGTTGTTGATGGTTGGCAAAGTGAGGAAACTGAGAAGCTTAAAAGTGCAATAGAGAAGGAGTTAATAAATTTTCAGGAGCATTCTTGGTTAAGACAGAATTCTTCCTCTGCTAATGCGGAGCCCAATCAAACAAGAACAGAAGGTTTTCCTAATCCTGTTGAAATACCCACTGATGAGACCAATGTCTGGGAAATTGATACAAGATGGCTAAAATTTGAAAATAAAGTTGGATCTGGGTCATTTGGGGACTTGTATCGTGGAACATATTGCAGTCAGGAAGTGGCTATTAAAATCTTAAAGCCTGAAAGAATCAATGGAGAGATGCTGAAAGAATTTTCTCAGGAAGTTTATATTTTGAGGAAAATTCGTCACAAGAATGTTGTCCAATTTATTGGTGCTTGCACTAGACCTCCGAATCTATGTATTGTGACGGAATTTATGTCAAGAGGAAGCGTATACGACTTTCTTCATAAACAAAGAGGCATTTTTATGCTTCCTACTTTACTTAAAGTAGCATCTGATGTTTCGAAGGGGATGAACTATTTGCACCAAAACAAAATAATCCACAGAGATCTCAAGACTGCAAATCTTCTAATGAATGAAAACCAGGTTGTTAAGGTGGCTGATTTTGGGGTGGCCAGAGTACAGGCGCAGTCTGGGGTGATGACTGCTGAAACTGGAACATATCGTTGGATGGCTCCCGAGATCATTGAGCATAAGCCATACGATCACAAAGCAGATGTCTTCAGCTTTGGAATATCAATATGGGAGCTTCTAACTGGTGAAATTCCATACTCATACTTGACCCCATTGCAAGCAGCAGTTGGTGTGGTTCAGAAGGGACTAAGGCCTACGATCCCCAAAAATACGCATCCAAGACTCGCGGAATTGCTTGAGAGATGCTGGCAACAAGATCCAACTCAAAGACCAGATTTCTCTGAAATTCTCGAAATTCTTCAGCAAATAAGCGAGCAGATCGAAATTGAGGGGGACGACGGGAGCAAGAAGAACAGATCATCAGGTGGCATATTTTCTGCACTGAAATGGGGACACCATTGA | 1749 | 41.34 | MAIEEDIESCGSRPSQSSQGAPRQQRQKLEVYSEVLIRIQESNHEEANLPGFDDQLWLHFNRLPARYALDVNVERAEDVLTHKRLLQLAEDPNRPIAFEIRPVQVYPAANGNSPDYVHSDSSMREDAQSSFNYSSRHGSHPPPTFGSSPNLEVLALQAKNYIEDRDDVEKNDSALSMTPCFPKPMHEITFATIDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWQSEETEKLKSAIEKELINFQEHSWLRQNSSSANAEPNQTRTEGFPNPVEIPTDETNVWEIDTRWLKFENKVGSGSFGDLYRGTYCSQEVAIKILKPERINGEMLKEFSQEVYILRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSVYDFLHKQRGIFMLPTLLKVASDVSKGMNYLHQNKIIHRDLKTANLLMNENQVVKVADFGVARVQAQSGVMTAETGTYRWMAPEIIEHKPYDHKADVFSFGISIWELLTGEIPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRLAELLERCWQQDPTQRPDFSEILEILQQISEQIEIEGDDGSKKNRSSGGIFSALKWGHH | 582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53342819 | 53349303 | - | Bda008748.1 | Bda11g01817 | 16925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01817 | 582 | CDD | STKc_MAP3K-like | 306 | 549 | - | - | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 114 | 149 | - | - | |
Bda11g01817 | 582 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 16 | 566 | - | - | |
Bda11g01817 | 582 | ProSiteProfiles | ACT domain profile. | 187 | 262 | IPR002912 | - | |
Bda11g01817 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 417 | 429 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 263 | 280 | - | - | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 111 | 149 | - | - | |
Bda11g01817 | 582 | Pfam | Protein tyrosine and serine/threonine kinase | 300 | 549 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 378 | - | - | |
Bda11g01817 | 582 | SMART | serkin_6 | 300 | 552 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01817 | 582 | SUPERFAMILY | ACT-like | 185 | 249 | IPR045865 | - | |
Bda11g01817 | 582 | Coils | Coil | 151 | 171 | - | - | |
Bda11g01817 | 582 | CDD | ACT_TyrKc | 185 | 251 | - | - | |
Bda11g01817 | 582 | ProSiteProfiles | Protein kinase domain profile. | 300 | 552 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01817 | 582 | ProSitePatterns | Protein kinases ATP-binding region signature. | 306 | 327 | IPR017441 | GO:0005524 | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 263 | 283 | - | - | |
Bda11g01817 | 582 | PANTHER | ACT-LIKE TYROSINE KINASE FAMILY PROTEIN | 16 | 566 | - | - | |
Bda11g01817 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 379 | 571 | - | - | |
Bda11g01817 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 457 | 467 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 411 | 429 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 476 | 498 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 374 | 387 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 520 | 542 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01817 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 276 | 549 | IPR011009 | - | |
Bda11g01817 | 582 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00737 | Bda11g01817 | CCT | |
Bda06g00737 | Bda11g01817 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00125 | Bda-Chr9:2075492 | Bda11g01817 | Bda-Chr11:53342819 | 8.01E-51 | dispersed | |
Bda11g01817 | Bda-Chr11:53342819 | Bda15g01020 | Bda-Chr15:19128759 | 0 | dispersed | |
Bda10g00776 | Bda-Chr10:42194225 | Bda11g01817 | Bda-Chr11:53342819 | 3.58E-23 | transposed | |
Bda01g00467 | Bda-Chr1:31775580 | Bda11g01817 | Bda-Chr11:53342819 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69953 | PF07714 | PK_Tyr_Ser-Thr | 6.30E-73 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01817 | - | - | mcha:111014825 | 872.078 |