Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01819 ATGGATTTTACTTTGTATTCGTCTCGGTCTTCCTCGTCGTCGTCTTCTCCGTTTGCTAATTTCGTCGAGAGAGTCAGGGAAACCTGCTGCTACGCGGTTACCGCCATTATTGGGAATATTTTCTTGGCGATCTTCACATTTCCTTCCTCCGCCATTATTGGGAATATTTTCTTGGCGATCTTCACATTTTCCTTCGCGCTAGTGGGTACCCTGTTAGGAGCAATGACCGGAGCATTGATTGGGCAGGAGACAGAGAGTGGATTCGTCAGAGGTGCGTCCATCGGAGCAATCTCCGGCGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTCGTTCTTTGGAAGTCTGATGAATCTGGCATAGTCTGTCTTCTCTACCTGATTGATGTCATTTCAAGCCTCATAAGCGGGAGACTCGTTCGAGAGCGTATCGGTCCGGCGATATTCAGCGCGGTTCAAAGTCAGATTGGTGTCGGAGAGCTGAGTTTCGAGGACTTGCCTAACATATTCGACACGAGCAGCACTAAAGGGCTGGCCGGAGACTCCGTCGAGAAAATTCCGAAGATCACAATTTCAGAGAACAATGACTTGGATGCTTCTGGATATAAAGTTTCTTGCTCAGTTTGCCTCCAGGATTTCCAAGTAGGAGAGACGGTGAGAAGTTTACCTCAATGCCATCACATGTTTCACTTACCCTGCATAGACAAATGGCTTCTCAAACACGGTTCTTGCCCATTATGCAGAAGGGATCTC 753 47.41 MDFTLYSSRSSSSSSSPFANFVERVRETCCYAVTAIIGNIFLAIFTFPSSAIIGNIFLAIFTFSFALVGTLLGAMTGALIGQETESGFVRGASIGAISGAVFSIEVFESSLVLWKSDESGIVCLLYLIDVISSLISGRLVRERIGPAIFSAVQSQIGVGELSFEDLPNIFDTSSTKGLAGDSVEKIPKITISENNDLDASGYKVSCSVCLQDFQVGETVRSLPQCHHMFHLPCIDKWLLKHGSCPLCRRDL 251
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 53376368 53378138 + Bda033167 Bda11g01819 16927
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01819 251 Pfam Ring finger domain 205 248 IPR001841 -
Bda11g01819 251 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 51 251 IPR044523 -
Bda11g01819 251 CDD RING-H2_PA-TM-RING 206 248 - -
Bda11g01819 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 251 IPR013083 -
Bda11g01819 251 SMART ring_2 206 247 IPR001841 -
Bda11g01819 251 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 51 251 - -
Bda11g01819 251 SUPERFAMILY RING/U-box 205 251 - -
Bda11g01819 251 ProSiteProfiles Zinc finger RING-type profile. 206 248 IPR001841 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00364 Bda-Chr7:4643936 Bda11g01819 Bda-Chr11:53376368 4.46E-28 dispersed
Bda11g01819 Bda-Chr11:53376368 Bda14g00977 Bda-Chr14:7903613 1.13E-142 dispersed
Bda14g00139 Bda-Chr14:967873 Bda11g01819 Bda-Chr11:53376368 8.98E-13 dispersed
Bda11g01819 Bda-Chr11:53376368 Bda11g00985 Bda-Chr11:9555561 1.57E-17 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01819 - - csv:101220376 369.777