Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01820 ATGAACTTTTTGAGGGTGTGTTGGAGGCCGTCCTCGGACCCTTTTCTCCAAGCCTATTCCTCAAATGGCCGGCAAGATGGATTGCTTTGGTACAAGGACATTGGACAGCACGGAGGCGTTGAATTTTCGATGGCTGTGGTTCAAGCCAACAATTTGTTGGAGGATCAGAGCCAGATTGAATCAGGTTCGTTGAGCTCACTCGATTCCAGCCTAGACGGCACGTTTGTTGGCATTTATGACAGTCACGGAGGCCCTGAGACATCTCATTTCGTCTGCGATCATTTATTCGAGCAGCAATTGATGTCAGCAGAGGTGATAAGAAAAGCCTATCAAGCGACAGAGGAGGGGTTTTTGTCGATTGTTGCCAAGCAATGGCCAATAAACCCACAAATAGCAGCCGTTGGATCTTGCTGCTTGGTTGGTGTGATTTGCAGAGGCACCCTCTACATTGCCAACCTCGGAGATTCCCGTGCTGTTCTCGGTAGACTGGTCAGGTCTACTGGGGAGGTTCTTGCCATTCCGCTCTCCACAGAACATAATGTCGGGATAGAATCCGTTCGGCAAGAGATGCAGTCTTTGCACCCCGATGATCCCCATATTGTTGTTTCCAAGCACGATGTATGGGGAGTAAAGGGCTTGATACAGGTAAAAAGTCCAGAAATTATTGTGCATACTATGACTTGTCTATATGTTTTTTTTTTTTTTCATTTGCAGATATCTAGATCTATTGGCGATGCATATTTGAAAAAGCCAGAATATAATAGGGAACCTCTGTATGCTAAGTTTCGGCTTCGAGAACCCTTTAAGAGGCCGATATTGAGTTCTGAACCGTCGGTTTCTATATACGAACTTCAGCGACACGATCGGTTTCTCATCTTTGCATCTGACGGGCTATGGGAGCATCTCACTAGTCGGGAAGCCGTAGATATAGTCCAATATCATCCCCGCTGTGGAATCGCCAGGAGGCTCGTAAAAACTGCACTGCAACAAGCGGCTAAGAAACGAGAGATAAGATATTCTGATCTGAGCAAAATCGAATGCGGGGTTCGCCGCCATTTCCACGACGATATAACAGCGGTGGTCGTATTTCTTGACTCGAATCTCGCTGGCAGAGCCTGCTCGGTTAGAGGTCCCGTTACATTATCAACAGATGGAGGAACTAATCTGCCTGCAAAATCTCTTACTCCAAACTAG 1194 46.82 MNFLRVCWRPSSDPFLQAYSSNGRQDGLLWYKDIGQHGGVEFSMAVVQANNLLEDQSQIESGSLSSLDSSLDGTFVGIYDSHGGPETSHFVCDHLFEQQLMSAEVIRKAYQATEEGFLSIVAKQWPINPQIAAVGSCCLVGVICRGTLYIANLGDSRAVLGRLVRSTGEVLAIPLSTEHNVGIESVRQEMQSLHPDDPHIVVSKHDVWGVKGLIQVKSPEIIVHTMTCLYVFFFFHLQISRSIGDAYLKKPEYNREPLYAKFRLREPFKRPILSSEPSVSIYELQRHDRFLIFASDGLWEHLTSREAVDIVQYHPRCGIARRLVKTALQQAAKKREIRYSDLSKIECGVRRHFHDDITAVVVFLDSNLAGRACSVRGPVTLSTDGGTNLPAKSLTPN 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53378879 53380659 - Bda008750.3 Bda11g01820 16928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01820 397 Pfam Protein phosphatase 2C 61 333 IPR001932 -
Bda11g01820 397 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 237 387 - -
Bda11g01820 397 SMART PP2C_4 31 362 IPR001932 -
Bda11g01820 397 ProSiteProfiles PPM-type phosphatase domain profile. 41 364 IPR001932 -
Bda11g01820 397 PANTHER ALPHABET, ISOFORM E-RELATED 2 217 - -
Bda11g01820 397 Gene3D - 30 371 IPR036457 -
Bda11g01820 397 SUPERFAMILY PP2C-like 50 365 IPR036457 -
Bda11g01820 397 PANTHER ALPHABET, ISOFORM E-RELATED 237 387 - -
Bda11g01820 397 CDD PP2Cc 42 364 IPR001932 -
Bda11g01820 397 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 2 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01820 Bda-Chr11:53378879 Bda14g00978 Bda-Chr14:7906517 0 dispersed
Bda11g01820 Bda-Chr11:53378879 Bda14g00960 Bda-Chr14:7730172 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01820 K01102 - qsu:112022787 547.354