Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01830 ATGGCTTCTCTTGACCCCCATCACCGAAACTCTCTCTATCCTCCAGTTATTCAATCAAATCCCGACGCCCATGCCCCGACATCATGCGTCTCCCGTTCGGATCTCAATCCGCCTTCTTATTCTTCTTCTTCTAATCTTTATCCCACTATCGACATGAGAGATCTCACAGAGAATCTATTCCCATTCCCGGAGAACAGAGATTATCGTGACCCTTACCAAGTTTCTCCTTCGGCTCCTCCAGTAGCGGTAGAAGAGGTTCTTGTTAAAATCCCTGGGGCTATTCTTAATATCATCGACAGGCATTACAGTGCTGAGCTTGCTTGTGGCGATTTTTCTATTGTCTGTCTACGACAGAGCGAAAATGTTGTCGCGATGCTCGCTCGCGTCGCTGATGAGATCCAATGGCCATTGATAAAAGATGAGGCGGTAGTAAAACTCGATGAATCGCATTACTTCTTCTCTCTTCACCCTCCCAAAAAAGGAGATTCCGATTCTGAATCGAGCGACGAGGAAGAGGGAAGAAGGAACGATCATGGCTCCGAAAGTTTGCTGAACTACGGGCTGACAATCCCATCAAAAGGGAAAGAAAAATCATTGAAGGAACTGGACCGAATTTTGGACCAATTTAGTAGCTTCACGGTACAGAAGGTGTCGTACAAGGCAAAAAAGGGTGAGGCGTTGGACGGGTCTCTGGCTGAGGAGATGTCTGCGGCGGATCTGAAATCAGGGAAGAAGAAGAAACTGATGGAGGGTAAGTGTGCGGCTTACTGGACCACACTGGCTCCTAATGTCGAGGATTACAGTGGGACTGCAGCAAAGTTGATCGCCGCCGGTTCAGGTCACGTGATCAAGGGAGTTTTATGGAGTGGAGATGTGACTGCAGATAGATTGAAATGGGGGAATGAGGTGATGAAGAGGAAGATGAGCCATAGCTCTGAAGTAGAAATTGACCCTCAAACTCTGAAGAGAATTAAAAGGGTTAAGAGGGTGACGAAAATGACGGAGAAAGTGGCAAATGGAGTACTTTCGGGAGCTATCAAAGTTTCAGGATACTTAACAAGTTCAGTGGCAAATTCGAAAGTAGGCAAGAAATTTTTCAGCCTCCTCCCTGGTGAAATTCTGCTAGCTTCCTTGGATGGATTTAGTAGAGTTTGTGACGCTGTCGAAGTGGCCGGGAAAAATGTCATGTCTACATCTGCTACGGTGACCACAGATTTCGTGTCCCACAGATACGGGGAAGAAGCTAGCCGTGCAACAAATGAAGGTCTGGACGCTGCTGGCCATGCTATAGGGACTGCATGGGCTGCTTTCAAGATCCGAAAGGCTCTCAATCCGAAAAGTGTCCTCAAATCTTCTAGCCTTGCCAAATCTGCTGTCAAAGCTGGGGTGGCTGACATGAAAGCCAAGAAATCCAACAGCATATCAAAAACCTCCACCCAGTTTTGGATCGCACAACCTCTCTACGCTCCTATACAACGAAGGTTTTTGTTCTCATTTATGTTTCAATATATTTGGAGAGAATGGTGGAAAAGTAGTCGATTGTCGCTTGAAATTTCTGAATGCTCCTCCACTCTGACCAATCCAATGGCTACTCCTATGAGGAGGGTGTTTGACAGAATATCGGGTCTCGCCAGAACTCTACAGAGGAGCAAAGCTCCTCGAGGAAGAAGACTCTTTCACAGAGATGTTGAGCAGCAAGAATTTCAGTTTGCCAGCACTCATTGTCTCTCATCCTACTACAGTGTCTTTGCAGCTCGCCTTGCTATAATGGTCATGTTGGCGATTTTGATCGGACTGTTAACGCTGTTGACATGGCATTTTACGAAAATCTACACAGCAGAGTCTCTGAATAGCTTAGCATATGGCGTTCGGCACGAGCTTCTGCAACGGCCCATTCTACGAATGTGGAGCATCTTGAACTCGACTTCCGAAATAACGACAGCCCAAGTTAAACTCTCAGAATACGTGATTCGGAAGTATGACAAGCCTGCAACTCAAGCGCAAGAAATCGAGTTGTATGAAGCGATGAAGGATGTGACTTGGGCGCTATTTGCGAGTCAAAAAGCTCTAAACGCGATTACGATCAATTACCGAAACGGATTTGTCCAGGCATTTCATAGAGATCATAGGAGCAATAATACATTCTATATTTACTCTGATCTTGCCAACTACTCTATCAGTGCTACTGAATCTTATAACACTAACAGACTGCCATCAGATCGAGGTTGGTCCGATCATCCGATTCATGGTAATGTTTCTGCGATCTGGTATCGTGAGCCACTTGATCCTGTCAGTGGAGAAAAGATTGGAAAAGCTAGGCCAATCCCACCTGAGGATTTGATTAATATTGCCGGAATTTCGCAAGTGGCTGATGGTGTAGCCTCTTGGCATGTGACTGTCAGCAAGTATATGGATTCCCCTTTGCTTTCGGCCGCTTTGCCCGTCTCGGACCCTTTGAACGAAACGATTGTAGCCGTTGTGGGTGTCACCACTGCACTTTCGAGTGTCGGCCAGCTGATGAAAGAACTTGTCGAATTTCATAGCGGTCATATTTATCTGACATCTCAAGAGGGTTATTTGCTAGCCACTTCAGCCAATTCTCCGCTTTTGACGAAGACGATTAAGGGGCCGAAGCTTATGATGGCTGTCGATTCCGAGGACGACATGATTCGATTAGGCGCCGAGTGGCTGCAGAAAAATTACGACAACAAGTTTCCTCCGAATCACGAGGTTCATGCTGAAAATATCGGACTAGGTCGCCAGAGATATTATGTTGACTCGTTTTTCCTCAATTTAAAGCGACTTCCAATTGTTGGAGTCGTTATCGTTCCGAGAAAACACATAATGGGGAAGGTGGATGAGAGAGCTTTCAAAACGTTGGCGATTCTCATATCGGCATCGTTGTGTATCTTAGTCGTCGGATGTGTCTGTATTTTCATTTTGACTAATGGAGTATCCAAGGAAATGGATCTAAGAGCACAATTGATAAGCCATCTGAATGCAAGAAGAAGGGCTGAGGCATCTAACAACTACAAAAGTCAGTTTCTAGCAAACATGAGTCACGAGTTACGAACGCCAATGGCTGCAGTAATTGGACTGTTGGACATTCTTATTTGTGATGATTGCATTACAAATGAACAATATGCGACAGTTTCCCAGATAAGGAAATGCTCCACAGCTCTACTTCGTCTGCTAAATAACATATTGGACTTGAGCAAGGTTGAATCTGGAAAATTAGTGCTGGAAGAAACTGAGTTTGACCTCGGACGGGAACTTGAAGGGCTTGTCGATATGTTTTCTGTGCAGTGCATTAACCACAACGTCGAGACTGTCTTGGATCTATCGGATGATATGCCAAAACTAGTTCGGGGAGATTCGGGTAGAGTTGTTCAAATATTTGCAAATTTAATCAGCAATTCTATCAAGTTTACAGCTTCTGGTCATATTATTCTTCGCGGGTGGTGTGAGAGCTCGAGCTCTTCAAATGAAAATGGCAAGTTGTCGTTTGATCAGAAGAGGTCGCGATTTCCTAATCGAATGAAACTGAAGCAGCAAGGACACCACACGAAAAGTAGTTACAAGAAGGAGAATAAAATGACTCTTTGGTTTGAAGTTGAGGATACCGGCTGCGGAATTGATCCAAGCAAATGGGAGTCTGTCTTTGAAAGCTTTGAGCAAGCCGACCCCTCGACAACCCGAACGCATGGAGGCACGGGTCTTGGACTATGCATCGTACGAACCCTGGTTCATAAGATGGGTGGAGAAATCAAGGTTGTGAAGAAGAATGGTCCGGGTACTTTAATGCAGCTGTACTTAGTTCTAAGTACTCCGGAATCCTCGGAGCAACGCTATCAACTAGATTATTCGAAGCATAACTTGGTGTTATTGCTTGCATTGAGAGGTAAAATGAGTCGATTAATCATGTCCCAATGGCTTCGAAAAGTTGGACTTCTCACGGTAGATGCGTCTGAGTGGAACGATCTAACTCTAATTCTTCAGGAGCTGTTTCGAGCCAGGAATTCGAATCATAGTAATGGTTTCGAGACAGATGGGGGACCTTTCCGAGCTGGATTGTTTGATGTTCAAAACACGAGAAATCGGATGTTCATCACTTTTGTCGATATCGGCCTACTGGACCTGAGTACAGATATCTGGAAGGAACAGCTTAACTTCCTCGACAGATATTCGGGAAAAACTAAGTTTGCATGGATGTTGAATCACGATACGTCGAATGCGATAAAGATGGAGCTTCGAAGAAAAGGACACTTATTGATGATCAACAAACCTCTGTACAAGGCGAAAATGGCTCAGATTCTGGAAGCTGTGATCAAGGAGAAAAACACTGAAGTGTCCAAGAGAAGTTCGAATGGTCTGCAAACTTCGTCCAAGGAAGGTGATTTTTACGAATGCCTCGAGATCGATTCTCATTTTGATACTGGCAGCTCGGACGATTCCGATGTATCGGAATTGGGCCCTTCCAACTCGGAATCTGGATTTCGAGTTGGAGAAAAACAGAGGGATGTGATTAAAAAGCCATATCAGAGAGACAACCATTGCATTGTAGAATTAACTCATGTGTACTCGAAGGAAAGTGATTCCATTTCGACAACTCAGGTACCCGTTTCATCGGAAAATCACGACTGGCAAGGTCAAAGTTTGGCAGAAGAACGAGGCGAATCGTATTCTAAACCGGAACATTGTCAAAAATCTCTCGAAGGATTACGGATTCTACTGGCAGAAGATAATCCAGTTCTCCAGCGAGTGACTACTATAATGCTCGAAAAAATGGGAGCCGCAGTTGTGGCCGTGGGAGATGGATTACAGGCGGTACACGCTCTGACGTCAATGCCAGACGGAGAAGAAAATTGGAGTGATCGTCCGACAAAACCCGGCAGTGCCACCCCATATGACTTGATCTTAATGGACTGTCAAATGCCGAAGATGGATGGATACGAAGCAACGAAAGCTATCAGGAAATCGGAAGCCGGAAGTGGTTTTCACATTCCGATAGTGGCTCTGACGGCGCATGCAATGTCGTCGGACGAAGCAAAGTGCTTGGAAGTAGGCATGGACGCGTACTTGACGAAGCCGATCAATTACAAGTTGATGGTATCCACCATTCTTTCTCTCACTAAAAGAACACCTTCTCTCTCTCTTGCTAAGGACGATGATACTCACCTTCACAAACCAAGCCTGTGTATTTAA 5205 45.17 MASLDPHHRNSLYPPVIQSNPDAHAPTSCVSRSDLNPPSYSSSSNLYPTIDMRDLTENLFPFPENRDYRDPYQVSPSAPPVAVEEVLVKIPGAILNIIDRHYSAELACGDFSIVCLRQSENVVAMLARVADEIQWPLIKDEAVVKLDESHYFFSLHPPKKGDSDSESSDEEEGRRNDHGSESLLNYGLTIPSKGKEKSLKELDRILDQFSSFTVQKVSYKAKKGEALDGSLAEEMSAADLKSGKKKKLMEGKCAAYWTTLAPNVEDYSGTAAKLIAAGSGHVIKGVLWSGDVTADRLKWGNEVMKRKMSHSSEVEIDPQTLKRIKRVKRVTKMTEKVANGVLSGAIKVSGYLTSSVANSKVGKKFFSLLPGEILLASLDGFSRVCDAVEVAGKNVMSTSATVTTDFVSHRYGEEASRATNEGLDAAGHAIGTAWAAFKIRKALNPKSVLKSSSLAKSAVKAGVADMKAKKSNSISKTSTQFWIAQPLYAPIQRRFLFSFMFQYIWREWWKSSRLSLEISECSSTLTNPMATPMRRVFDRISGLARTLQRSKAPRGRRLFHRDVEQQEFQFASTHCLSSYYSVFAARLAIMVMLAILIGLLTLLTWHFTKIYTAESLNSLAYGVRHELLQRPILRMWSILNSTSEITTAQVKLSEYVIRKYDKPATQAQEIELYEAMKDVTWALFASQKALNAITINYRNGFVQAFHRDHRSNNTFYIYSDLANYSISATESYNTNRLPSDRGWSDHPIHGNVSAIWYREPLDPVSGEKIGKARPIPPEDLINIAGISQVADGVASWHVTVSKYMDSPLLSAALPVSDPLNETIVAVVGVTTALSSVGQLMKELVEFHSGHIYLTSQEGYLLATSANSPLLTKTIKGPKLMMAVDSEDDMIRLGAEWLQKNYDNKFPPNHEVHAENIGLGRQRYYVDSFFLNLKRLPIVGVVIVPRKHIMGKVDERAFKTLAILISASLCILVVGCVCIFILTNGVSKEMDLRAQLISHLNARRRAEASNNYKSQFLANMSHELRTPMAAVIGLLDILICDDCITNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLEETEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQIFANLISNSIKFTASGHIILRGWCESSSSSNENGKLSFDQKRSRFPNRMKLKQQGHHTKSSYKKENKMTLWFEVEDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVHKMGGEIKVVKKNGPGTLMQLYLVLSTPESSEQRYQLDYSKHNLVLLLALRGKMSRLIMSQWLRKVGLLTVDASEWNDLTLILQELFRARNSNHSNGFETDGGPFRAGLFDVQNTRNRMFITFVDIGLLDLSTDIWKEQLNFLDRYSGKTKFAWMLNHDTSNAIKMELRRKGHLLMINKPLYKAKMAQILEAVIKEKNTEVSKRSSNGLQTSSKEGDFYECLEIDSHFDTGSSDDSDVSELGPSNSESGFRVGEKQRDVIKKPYQRDNHCIVELTHVYSKESDSISTTQVPVSSENHDWQGQSLAEERGESYSKPEHCQKSLEGLRILLAEDNPVLQRVTTIMLEKMGAAVVAVGDGLQAVHALTSMPDGEENWSDRPTKPGSATPYDLILMDCQMPKMDGYEATKAIRKSEAGSGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINYKLMVSTILSLTKRTPSLSLAKDDDTHLHKPSLCI 1734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53535758 53546547 - Bda008766.1 Bda11g01830 16938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01830 1734 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1066 1274 IPR036890 -
Bda11g01830 1734 SMART HisKA_10 1011 1077 IPR003661 GO:0000155|GO:0007165
Bda11g01830 1734 Gene3D - 999 1078 - -
Bda11g01830 1734 MobiDBLite consensus disorder prediction 1478 1500 - -
Bda11g01830 1734 PANTHER OSMOSENSOR HISTIDINE KINASE 529 1712 - -
Bda11g01830 1734 MobiDBLite consensus disorder prediction 156 187 - -
Bda11g01830 1734 ProSiteProfiles Histidine kinase domain profile. 1018 1276 IPR005467 -
Bda11g01830 1734 Gene3D - 1553 1713 - -
Bda11g01830 1734 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1124 1274 IPR003594 -
Bda11g01830 1734 SMART REC_2 1574 1707 IPR001789 GO:0000160
Bda11g01830 1734 MobiDBLite consensus disorder prediction 1484 1499 - -
Bda11g01830 1734 MobiDBLite consensus disorder prediction 1 41 - -
Bda11g01830 1734 ProSiteProfiles Response regulatory domain profile. 1575 1711 IPR001789 GO:0000160
Bda11g01830 1734 Pfam Senescence domain 274 458 IPR009686 -
Bda11g01830 1734 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 998 1078 IPR036097 GO:0000155|GO:0007165
Bda11g01830 1734 MobiDBLite consensus disorder prediction 13 41 - -
Bda11g01830 1734 SMART HKATPase_4 1124 1276 IPR003594 -
Bda11g01830 1734 Pfam His Kinase A (phospho-acceptor) domain 1012 1077 IPR003661 GO:0000155|GO:0007165
Bda11g01830 1734 SUPERFAMILY CheY-like 1572 1713 IPR011006 -
Bda11g01830 1734 PANTHER TWO-COMPONENT HISTIDINE KINASE 529 1712 - -
Bda11g01830 1734 Pfam Response regulator receiver domain 1576 1705 IPR001789 GO:0000160
Bda11g01830 1734 CDD HisKA 1012 1073 IPR003661 GO:0000155|GO:0007165
Bda11g01830 1734 Gene3D - 1079 1279 IPR036890 -
Bda11g01830 1734 CDD REC_hyHK_CKI1_RcsC-like 1576 1707 - -
Bda11g01830 1734 PRINTS Bacterial sensor protein C-terminal signature 1219 1229 IPR004358 GO:0016310|GO:0016772
Bda11g01830 1734 PRINTS Bacterial sensor protein C-terminal signature 1201 1215 IPR004358 GO:0016310|GO:0016772
Bda11g01830 1734 PRINTS Bacterial sensor protein C-terminal signature 1236 1254 IPR004358 GO:0016310|GO:0016772
Bda11g01830 1734 MobiDBLite consensus disorder prediction 156 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00415 Bda-Chr2:44761368 Bda11g01830 Bda-Chr11:53535758 4.48E-55 dispersed
Bda08g00997 Bda-Chr8:20563441 Bda11g01830 Bda-Chr11:53535758 7.12E-14 dispersed
Bda11g01830 Bda-Chr11:53535758 Bda13g00598 Bda-Chr13:6969439 5.80E-12 dispersed
Bda13g00810 Bda-Chr13:9525866 Bda11g01830 Bda-Chr11:53535758 8.87E-10 dispersed
Bda11g01830 Bda-Chr11:53535758 Bda14g00969 Bda-Chr14:7798251 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16735 PF06911 Senescence 3.20E-42 No_clan Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01830 - - cmo:103490686 1783.84