Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01840 ATGGCTGCCAAGATAGCTGAGAAAGCACAGACTGAGGGTTTTTGTTGGTGGATACTCGTGTTTGTAATCGGAGCCATGGTGGTTGCCGGAGCTACGTTCACTCTGTTGAAAAAGGTCGAAAAACTGAAAAAAGAGCATACCCAGGATCATCCAACCGCCATTGTTGAAGATTACGCTGCTGCTCTTAAACTCGCTATGCAGTTCTTCGACATTCAGAAATCTGGTAAGCTGGAGAACAATAGAATAGTTTGGAGAGGAGACTCAGGGCTGGGAGATGGGGCGGAGGAGAACTTGGATTTATCGAAGGGACTGTACGATGCTGGCGATCTGATTAAATTTGGATTTCCTCTAGCTTTTACTGCGACTGTTTTATCGTGGGCTATTCTTGAATATGGTGATAATTTGAAGGAGACGAAGCAACTGGACTACGCTCAGGACTCTCTCAAGTGGATAGCTGATTACCTTATCAACGCCCATCCTTCTCCAAATCTGCTCTATATTCAGGTGGGTGACCCTGAATCGGACCACAGATGTTGGCAGAGACCGGAAAATATGACAGAGAGAAGGCCCCTCACTCAGATCAACTCGTCTCACCCCGGAACAGAAGTTGCTGCAGAAACTGCGGCAGCCATGGCGTCGGCCTCTTTGGTTTTCAAAAACATCAACTCTTCATACTCGGATTTGCTAATTAAACATTCCGAACAACTGTTTAGCTTTGCTGATTCTAATAGAGGTTCTTACAGTATCAGTATTCCCCAAGTGCAAAAATACTATAATTCTTCTGGGTATGGCGATGAGCTCTTGTGGGCTGCTACTTGGCTCTATTTTGCAACCGGCGATGGGTCCTATCTCAGATATGTTACTGAGCAAAATGTGCAAGCATTTTCCGGCTGGGAAGATCCTTCTTGGTTTTCTTGGGACGACAAACACGCTGGAGTTCAAGTATTTCAAAATCTACCAAGTAGTTTTTGCTCTCTAAATGTTGAATTTTTTTTTCTTCAGTATTTTGATTTAATTTGGCTGCAGGTTTTGCTTTCCAGGGTAGATTTATTTGGTCGAGGAGATAACACTTCTCCTGGTGAAGATATTGATCTTCAAATTTACAGTAAAGCTGCCGAGGCTATTATGTGTGGGCTTTTACCAGATTCGCCGACAGCCACTTCCAGTAGAACAAAAAGTGGCTTAATATGGGTGGAAAGTTACAACTCTCTGCAACATTCAGTGGCTTCTGCATTTCTAGCTCTTCTTTCCAGCGATTACATGGTGGCGTCAGAGATCGGAACGATAAACTGTGCAGAAAAGTTATTCGGGCCGGATGATCTGCGAAACTTCGCGTCTTCTCAGGCAGATTACGTACTGGGTAAAAATCCAATGGAGATGAGCTATCTGGTCGGCCATGGCAGCCGATACCCTGAGTATGTTCACCACAGAGGAGCTTCGATTCCGGTGGATGCAGACACGGGCTGCGCCGATGGGTTTAAGTGGCTAGAGTCGATGGAGCCAAATCCAAACGTAGCTGTTGGAGCGTTAGTGGGTGGTCCGTTCTTCAACGAGAGCTATATTGATTTGAGAAATAACTCGATGCAGGGAGAGCCGTGCACTTACTCTAATGCTCTTCTTGTTGGCCTGCTCTCTGGTTTGGTCGCTAATTACTCTGTGATTCGACCGTTCTAA 1674 45.4 MAAKIAEKAQTEGFCWWILVFVIGAMVVAGATFTLLKKVEKLKKEHTQDHPTAIVEDYAAALKLAMQFFDIQKSGKLENNRIVWRGDSGLGDGAEENLDLSKGLYDAGDLIKFGFPLAFTATVLSWAILEYGDNLKETKQLDYAQDSLKWIADYLINAHPSPNLLYIQVGDPESDHRCWQRPENMTERRPLTQINSSHPGTEVAAETAAAMASASLVFKNINSSYSDLLIKHSEQLFSFADSNRGSYSISIPQVQKYYNSSGYGDELLWAATWLYFATGDGSYLRYVTEQNVQAFSGWEDPSWFSWDDKHAGVQVFQNLPSSFCSLNVEFFFLQYFDLIWLQVLLSRVDLFGRGDNTSPGEDIDLQIYSKAAEAIMCGLLPDSPTATSSRTKSGLIWVESYNSLQHSVASAFLALLSSDYMVASEIGTINCAEKLFGPDDLRNFASSQADYVLGKNPMEMSYLVGHGSRYPEYVHHRGASIPVDADTGCADGFKWLESMEPNPNVAVGALVGGPFFNESYIDLRNNSMQGEPCTYSNALLVGLLSGLVANYSVIRPF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53606306 53608301 + Bda008777.2 Bda11g01840 16948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01840 557 Gene3D - 331 555 IPR012341 GO:0005975
Bda11g01840 557 SUPERFAMILY Six-hairpin glycosidases 57 552 IPR008928 GO:0005975
Bda11g01840 557 PANTHER ENDOGLUCANASE 2 13 316 - -
Bda11g01840 557 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 451 477 IPR018221 -
Bda11g01840 557 PANTHER ENDOGLUCANASE 2 341 555 - -
Bda11g01840 557 Pfam Glycosyl hydrolase family 9 58 544 IPR001701 GO:0004553|GO:0005975
Bda11g01840 557 PANTHER ENDO-1,4-BETA-GLUCANASE 13 316 - -
Bda11g01840 557 Gene3D - 54 330 IPR012341 GO:0005975
Bda11g01840 557 PANTHER ENDO-1,4-BETA-GLUCANASE 341 555 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00267 Bda11g01840 CCT
Bda04g00267 Bda11g01840 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00285 Bda-Chr3:2504460 Bda11g01840 Bda-Chr11:53606306 0 dispersed
Bda11g01840 Bda-Chr11:53606306 Bda15g00869 Bda-Chr15:13954398 1.43E-131 dispersed
Bda01g00491 Bda-Chr1:31931854 Bda11g01840 Bda-Chr11:53606306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01840 - K01179 jre:108982352 721.85