Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01843 | ATGCGGGCGCTTTGCGACTCTTGTGAAAGTGCACCTGCTACTGTATTTTGCGCCGCCGACGAGGCCGCCCTCTGCCGTGCCTGTGACGAGAAGGTAGTCCATTTGTGTAATAAGCTAGCCAGCAGACATATAAGAGTAGGACTAGCGAATCCCAGCGATGTTCCTCAATGCGATATATGCGAAAATGCTCCTGCTTTCTTCTACTGCGAGGTAGATGGCAGTTCCCTTTGTTTGCAATGCGATACAGTTGTTCACGTTGGAGGTAAAAGAACTCATAAAAGATACCTTGTGTTGAGGCAGAGAGTCGAGTTTCCAGGCGATAAACCCGGAAGTTTGGATGATCCAGCTCAACCAGCCACTGACGGCAGTGAGACGAAACGGCTACAAAATCAACTGCCCAAAGTTACAGAGGGAGACAACTGGAAAAATGATCGTCATTCTGCTGATCCAAATGATGTTGTGGATGGGCATAATGAGACAGACAGTAAAATGATTGATCTGAATATGAAGCCTCTTCGAATTCCTGGGCAAGCTTCAAATGATCAGGTAAGGTTGCATTGTTTGATCAATTGGTAA | 576 | 46.53 | MRALCDSCESAPATVFCAADEAALCRACDEKVVHLCNKLASRHIRVGLANPSDVPQCDICENAPAFFYCEVDGSSLCLQCDTVVHVGGKRTHKRYLVLRQRVEFPGDKPGSLDDPAQPATDGSETKRLQNQLPKVTEGDNWKNDRHSADPNDVVDGHNETDSKMIDLNMKPLRIPGQASNDQVRLHCLINW | 191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53635914 | 53637114 | + | Bda008780.1 | Bda11g01843 | 16951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01843 | 191 | MobiDBLite | consensus disorder prediction | 138 | 159 | - | - | |
Bda11g01843 | 191 | MobiDBLite | consensus disorder prediction | 122 | 137 | - | - | |
Bda11g01843 | 191 | MobiDBLite | consensus disorder prediction | 106 | 159 | - | - | |
Bda11g01843 | 191 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 182 | - | - | |
Bda11g01843 | 191 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 48 | IPR000315 | GO:0008270 | |
Bda11g01843 | 191 | ProSiteProfiles | Zinc finger B-box type profile. | 52 | 97 | IPR000315 | GO:0008270 | |
Bda11g01843 | 191 | PANTHER | SALT TOLERANCE-LIKE PROTEIN | 1 | 182 | - | - | |
Bda11g01843 | 191 | Pfam | B-box zinc finger | 54 | 93 | IPR000315 | GO:0008270 | |
Bda11g01843 | 191 | SMART | bboxneu5 | 52 | 97 | IPR000315 | GO:0008270 | |
Bda11g01843 | 191 | SMART | bboxneu5 | 1 | 48 | IPR000315 | GO:0008270 | |
Bda11g01843 | 191 | CDD | Bbox1_BBX-like | 4 | 48 | - | - | |
Bda11g01843 | 191 | Gene3D | Classic Zinc Finger | 2 | 96 | - | - | |
Bda11g01843 | 191 | CDD | Bbox1_BBX-like | 57 | 97 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda10g00172 | Bda11g01843 | CCT | |
Bda10g00172 | Bda11g01843 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01236 | Bda-Chr8:50639497 | Bda11g01843 | Bda-Chr11:53635914 | 1.38E-23 | dispersed | |
Bda11g01843 | Bda-Chr11:53635914 | Bda14g00574 | Bda-Chr14:4384124 | 4.40E-22 | dispersed | |
Bda10g00172 | Bda-Chr10:5344462 | Bda11g01843 | Bda-Chr11:53635914 | 5.29E-89 | transposed | |
Bda01g00506 | Bda-Chr1:32057229 | Bda11g01843 | Bda-Chr11:53635914 | 6.74E-22 | wgd | |
Bda11g01843 | Bda-Chr11:53635914 | Bda14g00989 | Bda-Chr14:8030086 | 5.96E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16737 | PF00643 | zf-B_box | 8.00E-08 | No_clan | Bda | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01843 | - | - | tcc:18610806 | 275.404 |