Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01853 ATGGCCACATTAGTCGAGCCGCCGAATGGATTCAAGGAAAACGGGAAACACTATTACTCCATGTGGAAAACATTGTTCGAAATCGATAAAAAATATGTTCCGATCAAACCAGTCGGCAGAGGAGCATATGGAGTGGTGTGTTCTTCCATTAACACCGAAACCAACGAGAAAGTGGCGATCAAAAAGATCAACAACGTGTTTGAAAATCGCATCGATGCGTTGAGAACTCTGAGGGAGTTGAAGCTTCTTCGAAACATTCGACACGAGAATGTGATCGCTCTGAAGGACGTGATGATGCCGATCCATCGATCGAGCTTCAAAGATGTGTATTTGGTTTATGAGCTCATGGATACGGATCTGCACCAGATTATCAAGTCGTCACAGCCACTCTCAAATGATCATTGCAAGTTTTTTGTCTTTCAGTTGCTTCGAGGGCTGAAATATCTTCACTCGGCCAATGTTCTTCACCGTGATTTGAAGCCCGGGAATCTCCTCGTTAATGCCAATTGCGACTTGAAGATTTGCGATTTTGGGCTGGCGAGAACTAACAGAGGGAATGGGCAGTTCATGACTGAATATGTCGTCACCCGTTGGTACCGTGCCCCGGAGCTACTCCTGGCCTGCGACAACTACGGAACCTCCATTGATGTGTGGTCTGTCGGTTGTATTTTTGCCGAAATTCTCGGGAGAAAGCCGATCTTTCCCGGCACCGAGTGTCTAAACCAGCTGAAACTCATACTCAACATTCTCGGTAGTCAGCCAGAAGAAAATATAGAGTTTATCGATAATCCAAAGGCGAGAAAGTACATACAATCGCTTCCGTTTTCGAGGGGAATGCACTTTTCACGATTATATCCTCACGCAGATCCTCTGGCCTTGGATTTGTTGCAGAGGATGCTCGTTTTCGACCCCACAAAGAGAATTTCGGTGACTGAAGCTCTTAAACATCCTTACATGGCAGGGCTGTATGACCCGAGATGCGATCCGCCTGCTCTGGTACCGATCAATCTTGACATAGACGAGAGGCTGGGAGAACATATGATCAGAGAGATGATGTGGGATGAGATACTTTACTATCATCCTGAAGCTGCTTTTGCGTATTCATAA 1107 45.98 MATLVEPPNGFKENGKHYYSMWKTLFEIDKKYVPIKPVGRGAYGVVCSSINTETNEKVAIKKINNVFENRIDALRTLRELKLLRNIRHENVIALKDVMMPIHRSSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKFFVFQLLRGLKYLHSANVLHRDLKPGNLLVNANCDLKICDFGLARTNRGNGQFMTEYVVTRWYRAPELLLACDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLILNILGSQPEENIEFIDNPKARKYIQSLPFSRGMHFSRLYPHADPLALDLLQRMLVFDPTKRISVTEALKHPYMAGLYDPRCDPPALVPINLDIDERLGEHMIREMMWDEILYYHPEAAFAYS 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53680783 53682106 - Bda008790.1 Bda11g01853 16961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01853 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bda11g01853 368 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Bda11g01853 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01853 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Bda11g01853 368 CDD STKc_TEY_MAPK 26 361 - -
Bda11g01853 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01853 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bda11g01853 368 Gene3D Phosphorylase Kinase; domain 1 19 354 - -
Bda11g01853 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01853 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bda11g01853 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Bda11g01853 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00146 Bda11g01853 CCT
Bda10g00146 Bda11g01853 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00939 Bda-Chr10:43740442 Bda11g01853 Bda-Chr11:53680783 8.21E-137 dispersed
Bda11g00256 Bda-Chr11:2978852 Bda11g01853 Bda-Chr11:53680783 1.33E-144 dispersed
Bda11g01853 Bda-Chr11:53680783 Bda14g00997 Bda-Chr14:8181357 0 dispersed
Bda11g01853 Bda-Chr11:53680783 Bda01g01510 Bda-Chr1:50947019 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69955 PF00069 Pkinase 3.60E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01853 K20537 - mnt:21387151 684.485