Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01853 | ATGGCCACATTAGTCGAGCCGCCGAATGGATTCAAGGAAAACGGGAAACACTATTACTCCATGTGGAAAACATTGTTCGAAATCGATAAAAAATATGTTCCGATCAAACCAGTCGGCAGAGGAGCATATGGAGTGGTGTGTTCTTCCATTAACACCGAAACCAACGAGAAAGTGGCGATCAAAAAGATCAACAACGTGTTTGAAAATCGCATCGATGCGTTGAGAACTCTGAGGGAGTTGAAGCTTCTTCGAAACATTCGACACGAGAATGTGATCGCTCTGAAGGACGTGATGATGCCGATCCATCGATCGAGCTTCAAAGATGTGTATTTGGTTTATGAGCTCATGGATACGGATCTGCACCAGATTATCAAGTCGTCACAGCCACTCTCAAATGATCATTGCAAGTTTTTTGTCTTTCAGTTGCTTCGAGGGCTGAAATATCTTCACTCGGCCAATGTTCTTCACCGTGATTTGAAGCCCGGGAATCTCCTCGTTAATGCCAATTGCGACTTGAAGATTTGCGATTTTGGGCTGGCGAGAACTAACAGAGGGAATGGGCAGTTCATGACTGAATATGTCGTCACCCGTTGGTACCGTGCCCCGGAGCTACTCCTGGCCTGCGACAACTACGGAACCTCCATTGATGTGTGGTCTGTCGGTTGTATTTTTGCCGAAATTCTCGGGAGAAAGCCGATCTTTCCCGGCACCGAGTGTCTAAACCAGCTGAAACTCATACTCAACATTCTCGGTAGTCAGCCAGAAGAAAATATAGAGTTTATCGATAATCCAAAGGCGAGAAAGTACATACAATCGCTTCCGTTTTCGAGGGGAATGCACTTTTCACGATTATATCCTCACGCAGATCCTCTGGCCTTGGATTTGTTGCAGAGGATGCTCGTTTTCGACCCCACAAAGAGAATTTCGGTGACTGAAGCTCTTAAACATCCTTACATGGCAGGGCTGTATGACCCGAGATGCGATCCGCCTGCTCTGGTACCGATCAATCTTGACATAGACGAGAGGCTGGGAGAACATATGATCAGAGAGATGATGTGGGATGAGATACTTTACTATCATCCTGAAGCTGCTTTTGCGTATTCATAA | 1107 | 45.98 | MATLVEPPNGFKENGKHYYSMWKTLFEIDKKYVPIKPVGRGAYGVVCSSINTETNEKVAIKKINNVFENRIDALRTLRELKLLRNIRHENVIALKDVMMPIHRSSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKFFVFQLLRGLKYLHSANVLHRDLKPGNLLVNANCDLKICDFGLARTNRGNGQFMTEYVVTRWYRAPELLLACDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLILNILGSQPEENIEFIDNPKARKYIQSLPFSRGMHFSRLYPHADPLALDLLQRMLVFDPTKRISVTEALKHPYMAGLYDPRCDPPALVPINLDIDERLGEHMIREMMWDEILYYHPEAAFAYS | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53680783 | 53682106 | - | Bda008790.1 | Bda11g01853 | 16961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01853 | 368 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 345 | - | - | |
Bda11g01853 | 368 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 325 | IPR011009 | - | |
Bda11g01853 | 368 | Pfam | Protein kinase domain | 33 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01853 | 368 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 62 | IPR017441 | GO:0005524 | |
Bda11g01853 | 368 | CDD | STKc_TEY_MAPK | 26 | 361 | - | - | |
Bda11g01853 | 368 | ProSiteProfiles | Protein kinase domain profile. | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01853 | 368 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01853 | 368 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 354 | - | - | |
Bda11g01853 | 368 | SMART | serkin_6 | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01853 | 368 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Bda11g01853 | 368 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 365 | - | - | |
Bda11g01853 | 368 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 365 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda10g00146 | Bda11g01853 | CCT | |
Bda10g00146 | Bda11g01853 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00939 | Bda-Chr10:43740442 | Bda11g01853 | Bda-Chr11:53680783 | 8.21E-137 | dispersed | |
Bda11g00256 | Bda-Chr11:2978852 | Bda11g01853 | Bda-Chr11:53680783 | 1.33E-144 | dispersed | |
Bda11g01853 | Bda-Chr11:53680783 | Bda14g00997 | Bda-Chr14:8181357 | 0 | dispersed | |
Bda11g01853 | Bda-Chr11:53680783 | Bda01g01510 | Bda-Chr1:50947019 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69955 | PF00069 | Pkinase | 3.60E-71 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01853 | K20537 | - | mnt:21387151 | 684.485 |