Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01857 ATGTCGCATTCTCGGGAGCTAAACAGGGGCTCTACTGTGACGTCCAAGAAAAGCTTCAGAGCAAATGTAAATGGCGGACCTTTTGTCGCTAAGGCTCCTTACAACGACGTTTACGGAGGTCCACCTGAGTTTGGAGTCTCCTCACTCTCTCCTCGCCCTGAGGACTACAGTGAGATTTTTGGAAGTTTTCAAGTTTCGCGCGCTTCGTCGATTCCGATATTAGATCTTCCGGAACTGGATGAAAAAGAAGTATTCTTTGACGTCCAAAGCTCTAGCTTTGACTACGCTGAGGTTTTCGGAGGTTTCGACTGTCTAGATTTCGCTTTGGTTTGCTTTCTACGAAAACACCACCCCTTTAGCAGCAGGCCAAATATGATTGCCTTCCACCTTTTATGTAGGACTCCTGCAGGGACTGAATCTCTTTCAGATGACTCGGATCATTCTTCAAAATTGCAATGCATGTTTAACGGAGATTCTGACCTATCTTTCGATCGCTGCACAGAGTTCAAAATATCATACAATCAAGCCTATCAAAGTGGGAAAGAAGATATGTCAAATGGGATAACACATGTGACCCAGGTAAATGAAATTCCCGGCTTTACTTATCTGGTTGATGGAGCAGATTTCCGGGGTCAAGATGATGAGAATCATCCCTTTCATGCAAATGATGATGGATATTTCAATATTGATTTGAGTAATGGACTAAATGAGAATAAACCAGCAAAGAAGAAAGAGTCACAGCCTCCTAATGCTATCTATGAAAGACAAAGTTATGAAAATGGTCCTAAAACTCCAAATGGAAGTGATAAAAGTAGTTCTTGCCTTGATGAAAGTTTTATAACTATATCTGAAATCAACCTCAGAACTGAGCCTTCTCAAGTACCGCCACCTTCTCGGCCACCTCCAATTATAGGTGTGAAAAAGCTCTATTCCACATTGAACTCAAACAGCGATTATGTTTTTCCTGAAGGGATTTCAGATGATAGTTCACCTCCCTTTTTTGATGTAGAGGTAGATGCAAGTTCATCTGCCGCAGCGTCTGCAGCAGCTATGAAAGAAGTAATGGTAAAGGCACGAGCTAAACTCCTCAGTGCGAAAGAACTTATGGAGAGGAAGAAGGAAGGAGTACATAACCGTAGCAAACAACATTTCAAATATGATATGAAGGATAAGGAAGGAAGTGTGAGTACGTTGTTTGAGAGGTCCAACAATGGAAATGATGAGAAAGGGCAGGACACAGGTGAGATTGTTGAAAATGAGATGACATTTTCAGTTACAGATGAAATGAGAAAGGTTACACAAACAAATAAAGAAGTTCAAGTTTCATTGAAAGAAGAAAAACTGTTAAAAGTGGCTCATAAATTTGCAGAGAACAAGTTTAAAGATGATGCCATTGATGACTCAAGAAAACAGAAAGAAGCAGGGGGACTTTTTGAGGTGAAGCCAGATAATTCTAGAAAGGCTACTGAGCTGGTGAAAAATGAAAATATATCTGGAAGGACTGTAAAGACAGAAAAGGATATTGTGATTGAAGCACTGGAACAGCTTGGAGAAAACGACAACGAAGTTGATGCTGTTTTAAGTGTTCACGGACTCGAAAAAACAAGGGAAACGGAAGGAAAAAACTGGCAAGAGGACGACAACATGAGATCAAAACCAGCCACAGTACTAAATAGTCAAAGGGAGTATGAGCGGTCGGAAGGGACTCTATGTAATCATGATCTCAAAGAGAATGAGAAAAAGAGTGAAATAACTCATCTCTCAGTAGAGAAGAAGGGAAGTAGAGAAGCTGATAAGCCTGTGAAATATGAAGTGCTGGTAGAAGTTAAATATAATGACAATGGAGGTGAAGTTGAGCAGACTATTACCAAGGCAAATGGTAAGAGAAAAAGCCAAGTGATCAATGGGAGAAATGATAATAATAGTAAACTCAAGGAAATCAGCGTTGTTAGGGAAAATGAATTGGGTGCAATGGAGGGTATCCAACATCTAGAAATGGAGGGAAAACTTACAGAATCCTTTGACATGAGCGAATGTGAGAAAAGGCTGAAAAATATTCATGGACAGAATGAAAATGAGAGAAGTACAGAAGATATTCTTGAGAAGGGATTAGAAGATGATCTTCAGGAGGGAAATGAGGCCAAACCACCCAAGAAACCTAGTGAAAAAGAAGTTGGGAAGAGACTCAAAGATGATGAAGAATATGAGAAGAAACTGCAAGACATCCATGAAAGATGGGAAAATATATTGACAAAACATAAAAAACATCCCAAGGAAAAAGATAGTAGAAAGGAACTTGAAGAGATTAACAACAGAGAACCTAGTGAAATGAAAATCAAGGAAGCAGGTAAGCAGGACAAAATTGAAGCCACAGCAGATAATGCTAACCAATATAAGGAATTTGTAAATATGTTTGAGGATCACAAGAGAGAACTAAAGAAAATAAAATCGGCTGATAGAGCTCAGGTACAAATTGAAATGGAGCCTAGCAAGGTATGTAATGAAGTATGTGAGGTGGATCATGAATACCAAGCAATGCAACAGCACTGCAAGCATGATCAATGCAGAGAAAGAGTGGAAGCAACTCAAGGGTTCCTTGGTCACAACGAATGTGGAGATAAAATGGGTGAACACAAAATTAATAAGATACAGTTAGATAGTACTGGAATGATGCATCTGGAGTCTGCTGAAGACGTCAATGCATCCTACAGAGGCAAAGAAGTGTTCATAGACTTAGATTGGCTAGTCAGACCAGAAGACGTCGACAAATCTCTTTCTTTTGATGACAGTGGAAATAATGATATTGACGTAAGCAGCAAAATCAAATATTGTGAGATAGAAACAGATCCAGATGTACCCCCGGTTGCCGAAAACGTAAAGGCCTGTGGCATTTCCTACATATTCGAAGTACTTGAAAACGACCAAATTAAAATGAAAGACGAAAAAAATGTGCTTACTCAGGATGAGAGTGAAAAGAAAGGAAAAGAAGTTGGCATAAGCAATGGACATCAACACTCTGTGAAAATGGACAGTGTGCCCAAAGTAGTCTCCGATCCTGACCACCAAGATAGTAAATCTGATCAAGCCTTGAACCTCAAAGGAAACAAGGAAAAATTTGTATCAACGCATGTAGTTAAGGAGAGAGCTGAAAAAGAAAATAAAAGTGAAGCTAATGAGAGTCATGTCTCTGGAGGGAAAGAAAACACCCCAAATTTGGCTTCTGAGGTCAATGCAGGTCAGTTTATTGCAAGGAAAGATAAAATTATGAATGATACACTCTTGGTTGGAGATAGAGAAACTGAATGGATGAAGAAAAAACTGGAGCTCGAAAATGATCCACTTAAGATGGAAGAGAAGGAAAGGGAAAGGGAGAGAGAAAAGGATAGGATGATTATTGACAGAACCATTCTCGAAGGCCGTAAAGAAAACAATGAAGGCCATGCAGAAAAGGCTGCAACGGAGAGAGCCATTGCTGATGCGCAACGTAAAGCAATGTTAGATGCTAGAGAAAGACTAGAAAAAGCGTGCGCAGAGGCACGGGAAAAGTCTTTATCTGGGAAGACTGCTTTGGAGGCCAGGGTTAGAGCAGAGCGTGCTGCTGTTGAGAGAGCAAATGCAGAGGCTAGAGAGCGTGCATTCGAAAAGGCAATGGCTGAAAAGTCTGTTTTTGAGTCAAGAGAACGAATAGAGAGATCTTTTTCTGACAAATTATCTGCTTCTTCAAGAGGTACCGTAATAAGACAGAGCTCATCATTTAATGTAAGTATCCCCTCCCCCCTTCCTCTCTTTCTTTCTAGCCCGTGGTTAAAGGTAAGTGAAAGTGTTAATGTTGAGTCAGCTCAAAGATGTAAAGCTAGGTTGGAGAGACACAGAAGAACAGCAGAACGTGCAGCCAAGGCTCTTGCAGAGAAGAATATGCGTGATATTCTTGCACAGAGAGAGCAAGTGGAGAGAAATAGGTTAGCAGAAACTCTGGATGCAGATGTAAGGAGGTGGTCGAGTGGGAAGGAAGGGAACTTGCGTGCCCTGCTATCAACTTTGCAATATATATTATGGCCTGACAGCGGTTGGCAGCCAGTTCCATTAACCGAAGTTATAACAGCTGCTGCTGTTAAGAAAGCTTACAGGAAAGCCACTCTTTGTGTTCATCCTGACAAGTTACAGCAAAGGGGTGCTAGTATTCAGCAGAAATACATCTGCGAAAAGGTTTTTGATCTCCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTAA 4260 40.66 MSHSRELNRGSTVTSKKSFRANVNGGPFVAKAPYNDVYGGPPEFGVSSLSPRPEDYSEIFGSFQVSRASSIPILDLPELDEKEVFFDVQSSSFDYAEVFGGFDCLDFALVCFLRKHHPFSSRPNMIAFHLLCRTPAGTESLSDDSDHSSKLQCMFNGDSDLSFDRCTEFKISYNQAYQSGKEDMSNGITHVTQVNEIPGFTYLVDGADFRGQDDENHPFHANDDGYFNIDLSNGLNENKPAKKKESQPPNAIYERQSYENGPKTPNGSDKSSSCLDESFITISEINLRTEPSQVPPPSRPPPIIGVKKLYSTLNSNSDYVFPEGISDDSSPPFFDVEVDASSSAAASAAAMKEVMVKARAKLLSAKELMERKKEGVHNRSKQHFKYDMKDKEGSVSTLFERSNNGNDEKGQDTGEIVENEMTFSVTDEMRKVTQTNKEVQVSLKEEKLLKVAHKFAENKFKDDAIDDSRKQKEAGGLFEVKPDNSRKATELVKNENISGRTVKTEKDIVIEALEQLGENDNEVDAVLSVHGLEKTRETEGKNWQEDDNMRSKPATVLNSQREYERSEGTLCNHDLKENEKKSEITHLSVEKKGSREADKPVKYEVLVEVKYNDNGGEVEQTITKANGKRKSQVINGRNDNNSKLKEISVVRENELGAMEGIQHLEMEGKLTESFDMSECEKRLKNIHGQNENERSTEDILEKGLEDDLQEGNEAKPPKKPSEKEVGKRLKDDEEYEKKLQDIHERWENILTKHKKHPKEKDSRKELEEINNREPSEMKIKEAGKQDKIEATADNANQYKEFVNMFEDHKRELKKIKSADRAQVQIEMEPSKVCNEVCEVDHEYQAMQQHCKHDQCRERVEATQGFLGHNECGDKMGEHKINKIQLDSTGMMHLESAEDVNASYRGKEVFIDLDWLVRPEDVDKSLSFDDSGNNDIDVSSKIKYCEIETDPDVPPVAENVKACGISYIFEVLENDQIKMKDEKNVLTQDESEKKGKEVGISNGHQHSVKMDSVPKVVSDPDHQDSKSDQALNLKGNKEKFVSTHVVKERAEKENKSEANESHVSGGKENTPNLASEVNAGQFIARKDKIMNDTLLVGDRETEWMKKKLELENDPLKMEEKEREREREKDRMIIDRTILEGRKENNEGHAEKAATERAIADAQRKAMLDARERLEKACAEAREKSLSGKTALEARVRAERAAVERANAEARERAFEKAMAEKSVFESRERIERSFSDKLSASSRGTVIRQSSSFNVSIPSPLPLFLSSPWLKVSESVNVESAQRCKARLERHRRTAERAAKALAEKNMRDILAQREQVERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILWPDSGWQPVPLTEVITAAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53702338 53708242 - Bda008795.1 Bda11g01857 16965

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01857 1419 SUPERFAMILY Chaperone J-domain 1274 1418 IPR036869 -
Bda11g01857 1419 Gene3D DnaJ domain 1293 1419 IPR036869 -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 708 736 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 984 999 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 984 1033 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 230 273 - -
Bda11g01857 1419 PANTHER AUXILIN, ISOFORM A 8 1414 - -
Bda11g01857 1419 Coils Coil 1277 1319 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 250 273 - -
Bda11g01857 1419 Coils Coil 1187 1211 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 1014 1032 - -
Bda11g01857 1419 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 8 1414 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 1046 1073 - -
Bda11g01857 1419 ProSiteProfiles dnaJ domain profile. 1355 1419 IPR001623 -
Bda11g01857 1419 Coils Coil 1158 1182 - -
Bda11g01857 1419 MobiDBLite consensus disorder prediction 1046 1061 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01857 - - - zju:107424685 853.203
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00391 Bda-Chr4:50933003 Bda11g01857 Bda-Chr11:53702338 6.93E-83 dispersed
Bda10g00413 Bda-Chr10:36347515 Bda11g01857 Bda-Chr11:53702338 5.21E-83 dispersed
Bda11g01857 Bda-Chr11:53702338 Bda13g01471 Bda-Chr13:37613089 2.28E-54 dispersed
Bda02g00141 Bda-Chr2:20458559 Bda11g01857 Bda-Chr11:53702338 4.83E-28 transposed
Bda07g00921 Bda-Chr7:10824597 Bda11g01857 Bda-Chr11:53702338 1.50E-27 transposed
Bda01g00541 Bda-Chr1:32360312 Bda11g01857 Bda-Chr11:53702338 6.21E-34 transposed
Bda01g00782 Bda-Chr1:36344698 Bda11g01857 Bda-Chr11:53702338 2.44E-29 transposed
Bda11g01857 Bda-Chr11:53702338 Bda04g00041 Bda-Chr4:727788 5.48E-21 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g01857 Bda_Chr11 FPKM 175.407257 200.756836 216.328644 206.985596 98.834068 71.245308 77.474304 478.793549 472.789642