Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01861 ATGGCATTTGCGAGTGGGAGCAAAGAATCTGCTACTTCAGGAGTGCGAGTGACTGAAGGCGAAGGAAATCTACCAAAGGTTGTACTCACTTCCTCCAGCGGTAGTGAGGCTGATATATACTTATATGGAGGATGCATTACATCTTGGAAAGTTGGAAATGGCAAGGATTTGCTGTTTGTCCGCCCCGATGCTGTCTTCAACAAGCAAAAACCAATCAGTGGAGGCATTCCGCATTGTTTCCCGCAGTTCGGACCTGGCCCCATGCAGCAGCATGGATTTGCAAGAAACGTTGATTGGTCCGTCCTCGACTCTGAAAATGTAGAAGGCGACCCAGTTGTAACTCTAGAACTCAAGGATAGCTCTTATAGTCGTTCCATGTGGGATTTCAGTTTCCAAGTTCTATATAAGATTATTCTGAGTGGGAAGACCCTTTCCACCAAACTAATCATCACAAACACCGACAAGAAGCCGTTCTCTTTTACTACCGCCTTGCACACATATTTTCGAGCTTCTGTAGGAGGGGCAGTAGTTAAAGGCCTGAAAGGCTGTAAAACGCTAAATAAAGACCCAGATCCCAAAAATCCAGTGGAGAGTATTGAAGAAAGATATGTTGTCGATTTTCCCGGTTTCGTGGATTGTGTATATCTTGATGCCCCTAATGAGTTGAAGTTGAATAACGGCTTGGGCGATACAATATCCATTAGGAACACAAATTGGTCGGATGCTGTTCTGTGGAATCCACATCTACTTATGGAAGCTTGCTACAAGGATTTTGTTTGTGTCGAGAACGCCAAGATTGGAGTGATAGAGTTGCTGCCTCAACAATCTTGGACAGCTACACAAGAGCTTAGCATTGCCTGA 861 44.72 MAFASGSKESATSGVRVTEGEGNLPKVVLTSSSGSEADIYLYGGCITSWKVGNGKDLLFVRPDAVFNKQKPISGGIPHCFPQFGPGPMQQHGFARNVDWSVLDSENVEGDPVVTLELKDSSYSRSMWDFSFQVLYKIILSGKTLSTKLIITNTDKKPFSFTTALHTYFRASVGGAVVKGLKGCKTLNKDPDPKNPVESIEERYVVDFPGFVDCVYLDAPNELKLNNGLGDTISIRNTNWSDAVLWNPHLLMEACYKDFVCVENAKIGVIELLPQQSWTATQELSIA 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53718380 53720909 - Bda008799.1 Bda11g01861 16969

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01861 286 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 9 285 - -
Bda11g01861 286 CDD D-hex-6-P-epi_like 27 284 IPR025532 -
Bda11g01861 286 Gene3D - 22 285 IPR014718 GO:0030246
Bda11g01861 286 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 9 285 - -
Bda11g01861 286 SUPERFAMILY Galactose mutarotase-like 25 283 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bda11g01861 286 Pfam Aldose 1-epimerase 26 283 IPR008183 GO:0005975|GO:0016853
Bda11g01861 286 PIRSF PHexose_mutarotase 5 286 IPR025532 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01861 K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] - jre:108997562 490.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01861 Bda-Chr11:53718380 Bda12g00493 Bda-Chr12:6646692 1.14E-31 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g989 . Blo16g00050 . . . Bpe13g00440 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0817 . . . . . Chy07g01232 . . . Bda11g01861 . . . . Bma06g00118 . . . . . . . . Cpe14g00477 . . . . . . . . . . . . . . . Csa04g00577 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010275 1 3 1 0 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 1 1 0 1 1 1 0 1 2 3 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g01861 Bda_Chr11 FPKM 9.431673 10.883901 3.453689 3.415098 9.076625 8.870265 9.760795 11.621127 11.786591