Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01872 ATGGCGTATTTGTGCACTGACGGTGGAAATCTGATGGCGATTGCTAACCAAGTGATGCAACAGAAACGCAAGCAAGATCAAGAGGAACAACCCCACCAACTTGCTGCACTCAGTCCTTTGCTGCTTTGCCCCCTAACCAATTCTCAACAATATCCCATTCAAAGCAATTCGAATTGGAGCTTCGGTCTTTCCGGCTTCGGCTTTCCCGACGCTTTTGAAGGCGTCGGAGAAGGGTTTTCCGGCGAAACAGGGTTTCAGTTTTCGAACGTGGAGCACCAGTCTGATGGGTCTAGGTTTTGGAACTTTGAAGGAGGTGCTGGTACTGAGTTTGAGTCAGAGGAGTGGATGCATATCTTAATGGGCGGCAGTGATTCTCCTGATAGCGCTACTCTACCTTCTGGATATGACGTTTGTCTGAACAATGCCGACTGCTGTCTCTTTGGCGCTGATCCGTATCCTTCCTCCGCCACTCACATCGCCGGCACTTATTCTCCACCTTCCGACCTCAACCCAGTCATCTTCTCCGACACTCGAAAGACTCCGCACCTTCTTCGACTTCAAGATCCTTGTTGGACCCCAATTCTGCAACCGCTGTCACCTCAAGCAGTGGCGACTGAAGAGAAACTAGATGACCCTTCTGTTTATGAGCCTGATATCGAACCTACTCTACCGCTCTTCAAAGCCCTTGTGGATTGTGCCAGAGTGTCTGCGTTAGATCCCGAGCTAGCTATGAAAACATTGAGTCGAATCATGTTATCCATATCAGAAAAAGGGAATCCAACTGAAAGAGTAGCCTTTCACTTTTGTGAAGTTTTGCGTAGCAGAATAATTTTTCCGCCGGAAAAGAGCTTGGCCGAGACCACTTCCGAAGAAGAGATGACGTTTCTCTACAAAGTCCTGAACGACGCTTGCCCGTACTCAAAGTTCGCCCATTTAACAGCCAACCAAGCCATAATCGAAGCTTGTGAAAGAGCCAGCAGAATTCACATCGTCGACTTTGGAATCGTACAAGGTATTCAGTGGGCTGCACTTTTACAAGCGCTGGCAACCCGCTCAGCCGGAAAACCCAGTCTAATTCGGATATCAGGTATACCGGCGTCGGTTCTGGGGAAATCTCCAGCCGCATCCCTGTTTGCCACCGGAAATAGGCTTGCCGAATTTGCGAAGCTTCTCGAACTGAATTTCGAGTTCGAACCGATATTGCAGCCGATTGAGGAGCTGCAAATTTCGAGCTTTCGCGTTGGATCGGAGGAGGTATTGGCCGTCAACTTCATGCTTCAACTGTACAACTTCTTAGACCAGACTCCGGTTCAAGTTCAGAAAGTTCTTCAGCTAGCTAAATCGTTAAACCCAGATATAGTGACGCTGGGCGAGTACGAAGCGAGCTTGAGTCGATCCGGGTTTGTCAGCCGGTTCAACAACGCATTAAAATATTTCTCGGCCGTGTTCGAGTCTTTGGAGCCGAATTTGGCGCGAGACTCACCGGAGAGACTCCGACTGGAGAAATATTTACTGGGTTGCCGAATCGCAGGAGTACTCAGACGATCAGAGCCAGGAGGAAGAAAGAGAGAGCGGATGGAAGAGAAGGGACAGTGGAAAGCTCTGATGGAAAGGACGGGTTTTGAAGGGGTAGGACAAAGCCATTACGCCGTGAGTCAAGCTAAAATCCTTTTATGGAACTACAATTACAGCACCCAGTACTCAGTAATGGAATCTCCACCTGGGTTTCTCACTTTAGCCTGGAATGAAGTTCCCCTCCTCACTGTTTCTTCATGGCGTTAA 1782 48.88 MAYLCTDGGNLMAIANQVMQQKRKQDQEEQPHQLAALSPLLLCPLTNSQQYPIQSNSNWSFGLSGFGFPDAFEGVGEGFSGETGFQFSNVEHQSDGSRFWNFEGGAGTEFESEEWMHILMGGSDSPDSATLPSGYDVCLNNADCCLFGADPYPSSATHIAGTYSPPSDLNPVIFSDTRKTPHLLRLQDPCWTPILQPLSPQAVATEEKLDDPSVYEPDIEPTLPLFKALVDCARVSALDPELAMKTLSRIMLSISEKGNPTERVAFHFCEVLRSRIIFPPEKSLAETTSEEEMTFLYKVLNDACPYSKFAHLTANQAIIEACERASRIHIVDFGIVQGIQWAALLQALATRSAGKPSLIRISGIPASVLGKSPAASLFATGNRLAEFAKLLELNFEFEPILQPIEELQISSFRVGSEEVLAVNFMLQLYNFLDQTPVQVQKVLQLAKSLNPDIVTLGEYEASLSRSGFVSRFNNALKYFSAVFESLEPNLARDSPERLRLEKYLLGCRIAGVLRRSEPGGRKRERMEEKGQWKALMERTGFEGVGQSHYAVSQAKILLWNYNYSTQYSVMESPPGFLTLAWNEVPLLTVSSWR 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53768324 53770105 - Bda008809.1 Bda11g01872 16980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01872 593 Pfam GRAS domain family 227 593 IPR005202 -
Bda11g01872 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 226 592 IPR005202 -
Bda11g01872 593 ProSiteProfiles GRAS family profile. 216 593 IPR005202 -
Bda11g01872 593 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 226 592 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00052 Bda11g01872 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01872 Bda-Chr11:53768324 Bda07g01379 Bda-Chr7:16636008 2.88E-57 dispersed
Bda11g01872 Bda-Chr11:53768324 Bda04g00052 Bda-Chr4:867857 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16744 PF03514 GRAS 2.50E-101 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01872 - - zju:107424599 706.057