Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01873 ATGCCTCATTCGGAGCTAATCCCATGTTTTCTTCCCTCCATTCTAGTTCTAGTTCTGTTATTCATTCTCCGCAAAAGGAAGCGCAGGAAACTCAATCTTCCACCCGGAAACATGGGGTGGCCTTTTCTCGGCGAGACCATCGGTTATCTCAAGCCTTATTCCGCAACCTCCATCGGAGAATTCATGAAGAAACACATTTCCAGGTACGGAAAAATTTACAAATCTAATTTGTTCGGCGAGCCGACAATAGTTTCGGCGGACGCGGAACTGAACAAATTCATCTTACAGAACGAAGGGAGATTGTTCGAATGCAGCTACCCTCGAAGCATCGGTGGAATTCTGGGCAAGTGGTCGATGCTAGTTTTAGTCGGAGACATGCACCGAGACATGAGGACTATCTCCCTCAATTTCTTGAGCCACGCGAGGCTAAGAACACATCTTTTAAGAGAGGTAGAGAAGCACACTCTGCTTGTGCTGACATCTTGGAAGGAAAATTCAACATTTTCAGCTCAAGACGAAGCCAAGAAGTTCACCTTCAACTTAATGGCGAAGCATATAATGAGTTTGGAAGCTGGAATGCCTGAAACAGAGCAGCTGAAGAAGGAGTACATCACTTTCATGAAAGGAGTCGTTTCAGCTCCCCTGAATTTTCCAGGAACTGCCTACAGAAAGGCTTTACAGTCTCGGTCGGCGATCCTCAAATTCATCGAGCAAAAAATGGAAGAGAGAAGAAGAAAGATGAAGGGGGGAAAAGAAAGTATGGACGAAGATGATCTTCTCGGGTGGACACTGAAGCATTCAAATCTTTCAACGGAGCAAATCTTAGATTTGGTACTCAGCTTGCTGTTCGCCGGCCACGAGACGTCGTCGGTGGCAATAGCCTTAGCCATCTACTTTTTGGAAGGCTGCCCTGGCGCAATACAACAACTGAGGGAAGAGCATCTAGCAATTGCCCGGACGAAGAAGGAAACAGGGGAGATGGAACTGAACTGGGAGGATTACAAGAAAATGGAATTCACCCAATGTGTTATTAACGAGACACTCCGGCTTGGCAACGTGGTAAGGTTTCTTCACAGAAAGGCACTGAAAGATGTTCGATACAGAGGTTATTTGATTCCGAGTGGGTGGAAAGTGCTGCCGGTGATTGCCGCCGTGCATTTGGACGCATTGCTTTTCGACCAACCTCACCACTTCAATCCATGGAGATGGCAGGTCAGCCGGAGCAAGGGGACAAGTAATAACTTTATGCCATTTGGTGGAGGACCACGACTGTGCGCCGGATCAGAACTAGCCAAGCTAGAAATGGCGGTTTTCATACACCATTTGGTTCTCAACTACGAATGGGAAATGGGTGAGGTGGACCAACCTCTTGCTTTCCCTTTTGTCGAGTTTCCAAATGGCTTACCCATCACAGTCCGTCACCACTCTCTCCTATAA 1437 47.11 MPHSELIPCFLPSILVLVLLFILRKRKRRKLNLPPGNMGWPFLGETIGYLKPYSATSIGEFMKKHISRYGKIYKSNLFGEPTIVSADAELNKFILQNEGRLFECSYPRSIGGILGKWSMLVLVGDMHRDMRTISLNFLSHARLRTHLLREVEKHTLLVLTSWKENSTFSAQDEAKKFTFNLMAKHIMSLEAGMPETEQLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSAILKFIEQKMEERRRKMKGGKESMDEDDLLGWTLKHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYFLEGCPGAIQQLREEHLAIARTKKETGEMELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYLIPSGWKVLPVIAAVHLDALLFDQPHHFNPWRWQVSRSKGTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNYEWEMGEVDQPLAFPFVEFPNGLPITVRHHSLL 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 53774640 53777056 - Bda008810.1 Bda11g01873 16981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01873 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Bda11g01873 478 Pfam Cytochrome P450 34 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 Gene3D Cytochrome P450 22 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PANTHER CYTOCHROME P450 90B1 15 452 - -
Bda11g01873 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PANTHER CYTOCHROME P450 26 15 452 - -
Bda11g01873 478 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda11g01873 478 SUPERFAMILY Cytochrome P450 29 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00825 Bda-Chr6:11515036 Bda11g01873 Bda-Chr11:53774640 2.60E-102 dispersed
Bda07g01035 Bda-Chr7:12212517 Bda11g01873 Bda-Chr11:53774640 8.39E-96 dispersed
Bda10g00434 Bda-Chr10:36865530 Bda11g01873 Bda-Chr11:53774640 1.45E-88 dispersed
Bda10g00436 Bda-Chr10:36900503 Bda11g01873 Bda-Chr11:53774640 9.35E-87 dispersed
Bda11g01873 Bda-Chr11:53774640 Bda12g00206 Bda-Chr12:2035965 4.26E-94 dispersed
Bda13g00455 Bda-Chr13:5501500 Bda11g01873 Bda-Chr11:53774640 1.64E-71 dispersed
Bda04g00037 Bda-Chr4:598987 Bda11g01873 Bda-Chr11:53774640 6.33E-109 transposed
Bda07g01408 Bda-Chr7:16959381 Bda11g01873 Bda-Chr11:53774640 6.35E-142 transposed
Bda14g00258 Bda-Chr14:1790676 Bda11g01873 Bda-Chr11:53774640 3.11E-127 transposed
Bda14g01429 Bda-Chr14:18273266 Bda11g01873 Bda-Chr11:53774640 5.59E-70 transposed
Bda11g01873 Bda-Chr11:53774640 Bda14g01010 Bda-Chr14:8507987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01873 K09587 - jre:108995250 805.823