Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01880 | ATGAACTCATCCACACAGTTTATTTCCTCAATGAGGATGGATGTATACGAACCAATGCACCACATTGGCATGTGGGGAGAAAACACAATGATCATCCAACCCGGCTCAAAATTAGATAATCAGTCGGACGATGCTTCATTTGGATCACTCGAACATCCTAACATTTATGTGAACCATGAAACAACTAAACCCGTTGACAAGGTAAAAAGACGTCTTGCACAAAATCGAGAGGCAGCTCGTAAAAGCCGTTTGCGGAAAAAGGCCTACATTCATCAGTTAGAAACAAGTCGTTCGAAGCTGATTCAATTGGAGCTGGAGCTTGATAAAGCAAGACAACAAGGTCTCTATGTTGGTTGCAGAGTTGATTCCAATCAGTTGAGTTTGTCCGGGACAGTAAATTCAGGTGTCACGACATTTGAGACGGAGTATGGACAGTGGGTGGAAGAGCAAAACAGGCAGATATGTGAATTTAGGACAGCCCTTCCTACAGATATAACCGATTTAGAGCTGCGAATAATGGTTGAAAATGGGATGCGGCATTATTTCAATCTATTCCACATGAAAGCAAGAGCAGCAAAGGCTGATGTTTTCTATGTCATGAATGGCATGTGGAAAACTTCAACCGAAAGACTTTTCTTGTGGATTGGAGGTTCTCGTCCTTCCGAGCTTCTCGAGATACTCGTGCCTCAGCTCGATACGTTAACCAAACAACAAGTTGTTGATGTTCACAACCTTCAAAGGTCTTGTAAGCAGGCCGAAGAAGCTCTTCTGCAAGGCATGGAAAAACTCCGTCAGGCTCTTATTGACGTAGTGGCTGGCCAACTAGCTGAAGGGAGTCATCCTCTTCGAACTGAAACTGCAATGGAGAGGCTAGAAGATCTAGTTAGCTTCGTTAATCAAGCTGACCATGTACGGCAAGAATCGTTGCAGCAAATGTACAAAATCCTAACGACGCGTCAGTCTGCTCAGGGGCTGCTTGTTTTGGGAGAGTATTTCCAACGTCTTCGAGCATTAAGTTCACTTTCATCCAACCAACCTCACAACTCCACCTAG | 1053 | 44.16 | MNSSTQFISSMRMDVYEPMHHIGMWGENTMIIQPGSKLDNQSDDASFGSLEHPNIYVNHETTKPVDKVKRRLAQNREAARKSRLRKKAYIHQLETSRSKLIQLELELDKARQQGLYVGCRVDSNQLSLSGTVNSGVTTFETEYGQWVEEQNRQICEFRTALPTDITDLELRIMVENGMRHYFNLFHMKARAAKADVFYVMNGMWKTSTERLFLWIGGSRPSELLEILVPQLDTLTKQQVVDVHNLQRSCKQAEEALLQGMEKLRQALIDVVAGQLAEGSHPLRTETAMERLEDLVSFVNQADHVRQESLQQMYKILTTRQSAQGLLVLGEYFQRLRALSSLSSNQPHNST | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 53845481 | 53847297 | - | Bda008818.1 | Bda11g01880 | 16988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01880 | 350 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 70 | 85 | IPR004827 | GO:0003700|GO:0006355 | |
Bda11g01880 | 350 | Coils | Coil | 93 | 113 | - | - | |
Bda11g01880 | 350 | Pfam | bZIP transcription factor | 66 | 100 | IPR004827 | GO:0003700|GO:0006355 | |
Bda11g01880 | 350 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 348 | - | - | |
Bda11g01880 | 350 | SUPERFAMILY | Leucine zipper domain | 68 | 100 | IPR046347 | GO:0003700|GO:0006355 | |
Bda11g01880 | 350 | PANTHER | TRANSCRIPTION FACTOR TGA1 | 1 | 348 | - | - | |
Bda11g01880 | 350 | Pfam | Seed dormancy control | 153 | 228 | IPR025422 | GO:0006351|GO:0043565 | |
Bda11g01880 | 350 | Gene3D | - | 66 | 115 | - | - | |
Bda11g01880 | 350 | SMART | brlzneu | 63 | 125 | IPR004827 | GO:0003700|GO:0006355 | |
Bda11g01880 | 350 | ProSiteProfiles | DOG1 domain profile. | 136 | 345 | IPR025422 | GO:0006351|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01880 | Bda-Chr11:53845481 | Bda14g01022 | Bda-Chr14:8625613 | 0 | dispersed | |
Bda11g01880 | Bda-Chr11:53845481 | Bda11g01888 | Bda-Chr11:53913625 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16747 | PF14144 | DOG1 | 1.10E-24 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01880 | K14431 | - | csv:116401613 | 481.485 |