Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00009 ATGGGCCAGCTGGGAAATGGGTACGACGAAGGTGTACAGCGGGTGGAAATGCCGGCGGCCAAGCCATTTCTGAAATCATTGAAGAACGGTCTGAAGGAGACCTTCTTCCCCGATGACCCACTTAAACAGTTCAAGAACCAACCCACGTCCAAAAAGGTCAAGCTTGGGTTTCAGTACTTCTTCCCGGTCCTGGAATGGGCTCCTCGTTATAGCTTTGCTTTCTTGAAAGCAGATCTCATTGCTGGAATCACCATTGCCAGCCTAGCTATTCCGCAGGGAATCAGCTACGCCAAGCTCACTAATCTTCCTCCAATATATGGCCTGTATTCGAGCTTTGTGCCTCCATTGATATATGCGATTATGGGGAGCTCCAGGGATCTGGCCGTCGGGACAGTGGCGGTTGCGTCGCTACTGATAGCGTCGATGTTGGGAGCGGAGGTTGATGCAAAGAAAAGTCCAGAGCTTTACATCCACCTCGCTTTCACTGCAACCTTCTTTGCTGGAGTATTCCAGGCTGCCTTGGGATTATTCAGGCTAGGCTTTGTGGTGGACTTTCTCTCGCATGCTACAATAGTGGGGTTCATGGCTGGATCAGCGGTGGTAGTGAGCCTGCAACAGCTCAAAGGCATTCTGGGCCTCGACCATTTCACTCACCACTCTGACATCGTCTCTGTTATGCGTTCTGTTTTCACCCAAACCCACCAGTGGAAATGGCAGAGTGGAGTTATAGGATGCGTCTTCCTTATTTTCCTCGTCAGCACCAGATTATTCAGCAAGAGACGGCCAAAATTCTTTTGGTTAGCAGCCATGGCACCTTTAATGTCAGTCATTTTGGCGAGTCTTTTTGTTTTTGTCACCCATGCGGAGAGACATGGAGTTCAAGTGATAGGAACGCTGAAGAAGGGTTTAAATCCCATATCAGTTACAGATCTCATATTTGCGCCTCCTTATTTGTCTCTTGCTGTAAAAACCGGCATCGTCACGGGCATCGTAGCTCTCGCCGAAGGAATAGCAGTTGGGAGAAGCTTTGCCATGTTCAAGAACTACAATATTGATGGAAACAAAGAGATGGTTGCAATTGGGACCATGAACATTGTTGGCTCTTGCACTTCTTGCTATCTTTCTACAGGGCCGTTTTCCCGCTCTGCCGTGAACTACAACGCAGGATGCAAAACGGCAGCATCAAACATTGTGATGGCAATTGCAGTTATGTTTACGTTGTTGTTCTTGACACCCCTGTTCCACTACACCCCCCTCGTGGTCCTCTCTGCTATAATCATGTCTGCCATGCTTGGCCTCATCGACTACGAAGCAGCCATTCATCTCTGGAAGGTTGATAAATTCGATTTTATAATCTGTATAAGCGCATTCGTCGGCGTGGTCTTTGCCAGTGTGGAAATTGGCCTCATCATAGCTGTTGCTATATCGGTGCTTAGAGTGCTTCTACTGATAGCAAGGCCGAGGACCTTTGCTCTGGGACACATTCCAAATTCTATGAATTATAGAAACATGGAACAATATCCAAGAGCAAATAGTGTTCCTGGCATTCTCATACTGGAAATCAATTCTCCCCTTTATTTCGCCAATTCCAATTACTTGAGAGAAAGGATTGTAAGATGGATTGATGTTGAAGAAGACAGCATAAATGCTTCTGGGAACACTAGTCTGCAGTATGTTATATTGGATATGAGTGCGGTTAGCAACATCGATACGAGCGGAATAGGCATGCTCCAAGAGATCAAGAAGATTCTCGACAGAAGGGGATTAAAGCTTGTGCTGACTAACCCTGGTGGCGAGGCCATGAAGAAGCTCAACAAGGGCAGGTTCGTCGAGAGTGTGGGGGAAGAATGGATCTTTCTTACGATCAGCGATGCCGTCAATGCCTGTAATTACATGCTCCAAAAATGCGAAACAGAATCTGGTAAAGACAAGGCAGAGGCGTGGAACAGCGTCTAA 1956 47.19 MGQLGNGYDEGVQRVEMPAAKPFLKSLKNGLKETFFPDDPLKQFKNQPTSKKVKLGFQYFFPVLEWAPRYSFAFLKADLIAGITIASLAIPQGISYAKLTNLPPIYGLYSSFVPPLIYAIMGSSRDLAVGTVAVASLLIASMLGAEVDAKKSPELYIHLAFTATFFAGVFQAALGLFRLGFVVDFLSHATIVGFMAGSAVVVSLQQLKGILGLDHFTHHSDIVSVMRSVFTQTHQWKWQSGVIGCVFLIFLVSTRLFSKRRPKFFWLAAMAPLMSVILASLFVFVTHAERHGVQVIGTLKKGLNPISVTDLIFAPPYLSLAVKTGIVTGIVALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSCTSCYLSTGPFSRSAVNYNAGCKTAASNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIMSAMLGLIDYEAAIHLWKVDKFDFIICISAFVGVVFASVEIGLIIAVAISVLRVLLLIARPRTFALGHIPNSMNYRNMEQYPRANSVPGILILEINSPLYFANSNYLRERIVRWIDVEEDSINASGNTSLQYVILDMSAVSNIDTSGIGMLQEIKKILDRRGLKLVLTNPGGEAMKKLNKGRFVESVGEEWIFLTISDAVNACNYMLQKCETESGKDKAEAWNSV 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 68625 71939 + Bda009719.1 Bda12g00009 17024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00009 651 Pfam STAS domain 507 625 IPR002645 -
Bda12g00009 651 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Bda12g00009 651 SUPERFAMILY SpoIIaa-like 511 629 IPR036513 -
Bda12g00009 651 PANTHER SULFATE TRANSPORTER 9 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda12g00009 651 CDD STAS_SulP_like_sulfate_transporter 507 622 - -
Bda12g00009 651 Pfam Sulfate permease family 75 455 IPR011547 GO:0016021
Bda12g00009 651 Gene3D STAS domain 486 632 IPR036513 -
Bda12g00009 651 ProSiteProfiles STAS domain profile. 506 629 IPR002645 -
Bda12g00009 651 TIGRFAM sulP: sulfate permease 62 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda12g00009 651 PANTHER SLC26A/SULP TRANSPORTER-RELATED 9 648 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01161 Bda-Chr9:42410452 Bda12g00009 Bda-Chr12:68625 2.21E-93 dispersed
Bda10g00557 Bda-Chr10:39538278 Bda12g00009 Bda-Chr12:68625 0 dispersed
Bda10g01195 Bda-Chr10:45942382 Bda12g00009 Bda-Chr12:68625 0 dispersed
Bda12g00009 Bda-Chr12:68625 Bda14g01473 Bda-Chr14:21453367 0 dispersed
Bda12g00009 Bda-Chr12:68625 Bda03g00872 Bda-Chr3:7564021 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00009 K17471 - jre:109018587 1021.15