Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda12g00035 | ATGGTTGTCCCGCTTAATACATGGGTACTCATCTCCAATTTCAAGCTAGCATACAACATGCTCCGACGACCTGATGGAACGTTTAATCGAGAATTGGCGGAGTTTCTCGAGCGAAAAGTCTCAGCAAATACTATTCCAGTCGACGGGGTCTTCTCATTTGATCACGTCGATCGAGTCTCCGGCCTTCTCAATCGAATCTATCAACCGGCCCTCGAAAATGAGTCAGAATGGGGCATTTCCGAGCTTCAAAAGCCGTTAAGCATTACTAGAATTGTACCTGTAGTTATCTTCTTCCATGGCGGAAGCTTCACGCATTCTTCTGCCAGTAGTGCTATTTATGACACCTTTTGTCGACGCCTTGTGAGCATTTGCAGGGCCGTTGTAGTGTCTGTAAATTATCGACGAGCACCTGAGCATCGATATCCTTGTGCATATGATGATGGTTGGGCTGCTCTTAATTGGGTGAAATCGAGAAAATGGCTTCAAAGTGGAGAGGATTCAAAGGTTTATGTATACTTAGCCGGAGATAGTTCCGGTGGCAACATAGCTCACCATGTGGCCACGAGGGCGGCCAGAGAAGGCGTTGAGGTGCTCGGAAATATTCTTCTTCACCCAATGTTTGGTGGGCAGAAGAGAACGGAATCAGAGAAGCGATTAGACGGAAAGTATTTCGTCACACTTCAGGATCGAGATTGGTATTGGAGAGCTTATCTTCCAGAGGGAGAAGATAGAGATCATCCGGCATGCAATATTTTCGGACCGAGGAGTAGATCCTTGGGAGGGCGAAACTTTCCAAAAAGTCTTGTTGTCGTAGCCGGATTGGATCTAATTCAAGATTGGCAACTCTCTTACGTTGAAGGACTTGAAAAATCTGGCCACAAGGTAAAGCTTCTCTTTCTAAAAGAAGCCACTATTGGATTCTACTTTCTGCCCAATAATGAGCACTTCTACTGCCTCATGGAGGAGATAAACGGCTTCGTCAACTCTGACCGATTAAACTCGACATAA | 1008 | 45.73 | MVVPLNTWVLISNFKLAYNMLRRPDGTFNRELAEFLERKVSANTIPVDGVFSFDHVDRVSGLLNRIYQPALENESEWGISELQKPLSITRIVPVVIFFHGGSFTHSSASSAIYDTFCRRLVSICRAVVVSVNYRRAPEHRYPCAYDDGWAALNWVKSRKWLQSGEDSKVYVYLAGDSSGGNIAHHVATRAAREGVEVLGNILLHPMFGGQKRTESEKRLDGKYFVTLQDRDWYWRAYLPEGEDRDHPACNIFGPRSRSLGGRNFPKSLVVVAGLDLIQDWQLSYVEGLEKSGHKVKLLFLKEATIGFYFLPNNEHFYCLMEEINGFVNSDRLNST | 335 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 215656 | 216663 | - | Bda009745.1 | Bda12g00035 | 17050 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda12g00035 | 335 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 171 | 183 | IPR033140 | - | |
| Bda12g00035 | 335 | PANTHER | ARYLACETAMIDE DEACETYLASE | 2 | 328 | - | - | |
| Bda12g00035 | 335 | Pfam | alpha/beta hydrolase fold | 95 | 308 | IPR013094 | GO:0016787 | |
| Bda12g00035 | 335 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative histidine active site. | 95 | 111 | IPR002168 | GO:0016787 | |
| Bda12g00035 | 335 | SUPERFAMILY | alpha/beta-Hydrolases | 89 | 327 | IPR029058 | - | |
| Bda12g00035 | 335 | Gene3D | alpha/beta hydrolase | 1 | 329 | IPR029058 | - | |
| Bda12g00035 | 335 | PANTHER | GIBBERELLIN RECEPTOR GID1B-LIKE | 2 | 328 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda04g00582 | Bda12g00035 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00320 | Bda-Chr5:46291417 | Bda12g00035 | Bda-Chr12:215656 | 0 | dispersed | |
| Bda08g01045 | Bda-Chr8:21996320 | Bda12g00035 | Bda-Chr12:215656 | 0 | dispersed | |
| Bda12g00035 | Bda-Chr12:215656 | Bda13g00258 | Bda-Chr13:3243049 | 1.70E-65 | dispersed | |
| Bda01g01303 | Bda-Chr1:48473976 | Bda12g00035 | Bda-Chr12:215656 | 1.39E-34 | transposed | |
| Bda10g00605 | Bda-Chr10:40077359 | Bda12g00035 | Bda-Chr12:215656 | 1.02E-15 | wgd | |
| Bda12g00035 | Bda-Chr12:215656 | Bda04g00582 | Bda-Chr4:54510769 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda12g00035 | K14493 | - | zju:107426069 | 596.66 |