Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00087 ATGGACCTAATTCAGATGGCATCAGTGGGAAACCAAACTGTAGAAAGTGTTACACCGGTTTCCAGCATTATTGGGAGTACAAAATGTGAAAGCTACTTGATTTTTAGGGCCGAAACTTCCTTAAGCGAACCAATACGAACAGTCTTGTACTTTCTTGGGCTTGCTTATTGTTTTATTGGATTGTCAGCTATAACTTCCCGATTTTTCCGTTCCATGGAGAATGTCGTGAAGCACTCTCAGAAGGTGGTGGAAGTAGATCCTTTGACCAAAGCTGAAACTGTTCGATATGAAAAGGTGTGGAATTTCACAATTGCAGATATTAGTCTCCTTGCATTTGGCACCAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTCTCCGAAACATGGGGAAGCTTTATGCTGGAGGTTTGGGTCCTGGAACACTTGTTGGTTCTGCTGCGTTTGACCTTTTCCCCATTCATGCTGTTTGTGTTGTTGTGCCAAAAGCTGGGGAATTGAAAAAGATAGCAGACTTAGGCGTTTGGCTGGTGGAGCTCTTTTGGTCTTTTTGGGCTTATATTTGGCTGTATATAATTTTAGAGGTGTGGACTCCAAATGTGATTACTGTCTGGGAAGCTTTGATTACAGTGGTGCAATATGGATTACTGTTGACACATGCTTATGCTCAAGACAAGCGTTGGCCATACATCTCTCTCCCTCTTGCAAGAATTGAAAGGCCAGAGGATTGGGTGCCTGCAGAGATTCCTAAATACAAACAATATGATGTATATGATGCAGCAGATGATGGAAGAGTAGATGAAGAAGAAAATGGAAGGATTGTTGACATTTTCTCTGTCCACTCAACAAATGTTGGAGATCCAGCATATCAGGAAGTTCCCGTAACTGATTATGTTGCTGAATCTTCAGATATGAGTGTTAACAGGGAGAACAATTTAGAAGATGCCCGTGTTCTTATAGTTTGGAAGCAACAGTTTGTAGATGCACTCAAGTTGGCAAATGTAGACTCTGCAAAAAAGAGCATTTATCGACGAGTGGGAAGAACTTGTTGGAAGTTACTTCTTCTTCCTTGGAAATTTTTCTTTGCTTTTGTTCCTCCTTATCATATTGGTCATGGATGGCTGGCCTTCATTTGCTCGCTGATTTTCATAAGCGGGATCGCTTACATTGTTACTCAGCTCACCGATCTTATTAGCTGCGTCACAGGAATTAATCCTTATGTAATAGCATTTACAGCATTGGCTAGTGGAACTTCCTGGCCAGACTTGGTTGCTAGTAAGATTGCTGCTGAACGTCAAACAATAGCAGATTCAGCCATTGCAAACATCACTTGCAGCAACTCAGTGAACATATACGTGGGTATCGGATTTCCATGGTTGATCGACACTGCATACAATTACATCGCGTATGGAGAACCTCTACGGATCGAAAACGCAGCAGGTCTCAGCTTCTCATTAGTAATCTTCTTCATTACTTCTGTGGGTTGTATTGGTGTACTAGTTTTAAGACGCATCACGTTAGGTGCAGAGCTTGGGGGTCCCAGGCCATGGGCATGGATGACCTGCATTTATTTTTTGCTGCTCTGGCTTATTTTTGTAGTGCTATCTTCTCTTAAAGTCTCAGGGGTCATATAG 1635 42.02 MDLIQMASVGNQTVESVTPVSSIIGSTKCESYLIFRAETSLSEPIRTVLYFLGLAYCFIGLSAITSRFFRSMENVVKHSQKVVEVDPLTKAETVRYEKVWNFTIADISLLAFGTSFPQISLATIDALRNMGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVITVWEALITVVQYGLLLTHAYAQDKRWPYISLPLARIERPEDWVPAEIPKYKQYDVYDAADDGRVDEEENGRIVDIFSVHSTNVGDPAYQEVPVTDYVAESSDMSVNRENNLEDARVLIVWKQQFVDALKLANVDSAKKSIYRRVGRTCWKLLLLPWKFFFAFVPPYHIGHGWLAFICSLIFISGIAYIVTQLTDLISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQTIADSAIANITCSNSVNIYVGIGFPWLIDTAYNYIAYGEPLRIENAAGLSFSLVIFFITSVGCIGVLVLRRITLGAELGGPRPWAWMTCIYFLLLWLIFVVLSSLKVSGVI 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 669988 673360 - Bda009799.2 Bda12g00087 17102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00087 544 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 280 544 - -
Bda12g00087 544 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 16 228 - -
Bda12g00087 544 Gene3D - 328 538 IPR044880 -
Bda12g00087 544 Gene3D - 103 238 IPR044880 -
Bda12g00087 544 PANTHER SODIUM/CALCIUM EXCHANGER 16 228 - -
Bda12g00087 544 PANTHER SODIUM/CALCIUM EXCHANGER 280 544 - -
Bda12g00087 544 Pfam Sodium/calcium exchanger protein 372 536 IPR004837 GO:0016021|GO:0055085
Bda12g00087 544 Pfam Sodium/calcium exchanger protein 50 222 IPR004837 GO:0016021|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00087 K03452 - cit:102606652 807.364