Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00128 | TCGAACTCCGATTCGGCTCTCATGTCTCGCCAAGCGGCGTCGTCGGCTTTCCATAAGTCGAAGACTCTCGACAATAAATATATGCTTGGAGATGAGATCGGCAAGGGGGCATATGGCCGAGTTTACAAAGGTTTGGATTTGGAGAATGGGGACTTTGTTGCCATTAAGCAAGTTTCATTGGAGAATATTGCTCAGGAGGATCTCAATATTATTATGAATTTAAATCACAAAAACATTGTCAAATATCTTGGATCTTCAAAAACCAAGACTCATCTTCACATAATACTTGAGTATGTGGAGAATGGTTCCCTTGCCAATATAATAAAGCCAAACAAGTTTGGTCCTTTTCCAGAATCATTGGTTGCTGTTTACATCAGTCAGGTTTTGGAAGGATTGGTTTATCTCCATGAACAGGGTGTTATTCATCGGGACATTAAAGGTGCAAACATACTGACAACCAAAGAGGGTCTTGTGAAACTAGCTGATTTTGGCGTTGCAACGAAGTTGAATGAGGCTGATGTTAATACACACTCAGTCGTTGGAACACCTTATTGGATGGCCCCAGAGGTGATTGAAATGTCGGGAGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGATGCACGGTCATTGAACTTCTTACATGTGTTCCTCCTTATTACGATCTGCAGCCCATGCCAGCGCTTTTCCGGATTGTTCAGGACAAACACCCTCCAATCCCAGATAGCCTCTCTCCGGATATCACAGATTTTCTTCGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCAGATGCAAAATCATTACTTTCTCATCCCTGGATTCAAAATTGTAAGCGCAATTTGCACAATTCTCTCCGTCACAGTGGGACATTGAGAAATATTCAGGAAGATGTTTCCGCTGATGCAGAAATTTCTAAAATAGATAATCAAAGCTCTTGCGAAAGACCTTTGACTAGTAAAGCTGAACTAGTTAATTCTGATATCAAAGCAGATGCCAGCAAGGAGTTATTGTCAACGGTCTGTGACATGAAAACATCTGATAAAGATCATGGCTCAGATTCTACCTTCCCTGAGGACAGAAGAGGTTACCAACCAGAAGATATCTCAGCGGATCAGGCTCCTATTTTAACCGTAAACAAAAAATCAACTCTGGTGACTAGTTCTGCTCAACCTTCTTCTAGTAAGGAAGTGGTTACGTCTGAATCAACTGAGTTTTATGAGCCGTCGCACAGTAATGTTGAATCACTGATGAATGGTGATTTTGAATCCCCTGAATCCAAAAGAAAAAACACGTCCAATAAACATGGAGGAAAAGGAACATCCCTGCATATTACTGGTAGATCATTTGGTTTTGGGTCAAAAAGTCGAGAAAATAGTTCACAGAAGAATTCAAAGGCATCTGTTACCTTGGAAGGAAATGAACTGAGTAGGTTTAGTGACACTCCAGGAGATGCTTCCTTGGATGATTTATTCCATCCATTGGATAAACAACCAGCGGATCAGATCGTCGAAGCATCAACATCTAGTTCTGCATGTAATCTGAATCAAATAAATGTATCTGTAGCTGATGCTGGTAAAAATGATCTGGCCACAAAGTTGAGAGCTACAATTGCTCAAAAGCAAATGGAAACTGTAATGGGTCAAACAAATGGTGGGAGTGACCTGTTGCGCTTAATGATGGGTGTTCTAAAGGATGATATGATTGATATTGATGGCTTGGTGTTTGATGAAAAGTTGCCTGGAGAAAACCCTTTCCAGCTACAGGCTTTTGAGTTTAGCAGATTAGTTGGATTATTGAGACCTGAGGAACCTGAAGATGTGATTGAGTCTGTTTGTCGGAAGCTTATCACAATCTTTCATCAACAATCTGAGCAGAAGCTTGTTTATGTCACCCAACATGGTTTGCTTCCTCTAATGGAATTGCTAGAGGTCCCTAAACCTCGAGTAATCTGTTCGGTGCTTCAACTTATAAACCAGATAGTTAAAGATAATACTGACTTTCAAGAAAATGCATGTCTTGTTGGTCTGATTCCTTTGGTGATGGGTTTTGCTGTACCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCGAATTTCTTGCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTTATTGCTTGTCGTGGAATACCTGTGTTGGTGGGGTTTTTGGAAGCTGATTATGCAAAATACAGGGATATGGTTCATTTAGCCATTGATGGCATGTGGCAGATTTTTAAGCTCCAGAGATCAACTCCTACAAATGATTTCTGTCGTATAGCAGCAAAAAATGGAATACTGCTCAGGCTTATTAACACCCTGTATAGTCTGAATGAGGCAACTCGTCTAGCATCGATATCTGTTGGGGGTGGATTGCCAGTTGATGGTTTAACGCAGCGGCCGCGATCTGGCCAACTTGATTCTAGTCATCCTATATTCAGTCAGACTGAGCCTTCAGCTTCTCCATCAGATCAGCCTGATCTTACTAAGGCTGGGCATGGAATAATCGATTTTCACATGTCCACTGGGATACAAGAAACTTCATTTGCTTCATCATCAAATTCTCAAAGATTAGACATCAATCAACCAGATCACCGACACATTTCCGCAGACGCTGATAGATTTCAATCCAATGGTACAATGGAAGCTTCTTTTACATCTAAATTGCCAGAGCTGAAATCTTTGGATAAAGATGTAGGTTTACCATCGAAAGATCCATCTGCTAGTGCGTCTAAAGAACGAGAAAACTTAGATAGATGGAAAGTTGACCCTTCTCGAGTAGATGGTGAAATAAGACAGCAACGGACAGCCACTTCAGCGAATAGGACATCAATTGATAAGTCACCGAAAGTAATGGAATCTACATCAAATGGGTTCTCTGTTGCAGCTGCTGCTTCACTAGACCAAGTGCGCCCCTTTCTAAGTTTGTTAGACAAGGAGCCCCCTTCCCGACATTTTTCTGGTCAGCTTGAGTATGTGCGCCACCTCTCTGGATTGGAGAGACATGAAAGCATATTACCTCTGTTGCATGCATCTAATGAAACAAAGACAAATGGTGAACTTGATTTTCTAATGGCAGAATTTGCAGATGTTTCTCAGCGTGGAAAAGAAAATGGAAGCCTGGACTCTGTTGCTAGAATTTCCAACAAAACAGTAACGAAGAAGGTCGGACCATTATCATCTAATGATGTCGCAGCCTCTATCTCAGGGGTTGTGTCTCAAACTGCATCCGGTGTGCTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGGAGTGCAGCGTCCTCTGGGTTGCTTTCACACATGGTTTCGACTTTAAATGCAGATGTTGCTAGGGATTACCTGGCAAAAGTTGCAGATCTTCTGCTTGAATTTGCTCTGGCTGATACAACCGTGAAGTGTTACATGTGTAGCCAAAGTTTGCTTAGTCGTCTTCTCCAGATGTTCAATAGAGTAGAGCCCCCAATTCTATTAAAGATATTGATGTGTATAAACCATCTGTCAACTGATCCAAATTGCTTGGAGAACCTTCAGCGGGCTGATGCCATTAAATATTTGATCCCAAATCTTGAACTCAAAGAAGGATCTCTAGTGTCTCAAATACATCATGAGGTTCTCAATGCACTATTTAACTTGTGCAAGATAAATAAGAGAAGACAGGAACAGGCTGCCGAAAATGGAATCATTCCCCATTTGATGCATTTTATTATGTCAGATTCCCCACTGAAGAGATATGCGTTGCCTCTGCTATGCGATATGGCTCATGCATCTCGTAATTCGAGAGAGCAGTTAAGAGCTCATGGAGGTTTGGATGTCTACTTGAGCCTTCTTGAGGATGAGCTTTGGTCAGTGACGGCCTTGGATTCTATTGCTGTTTGTCTGGCTCATGACAATGACAACCGAAAGGTTGAACAGGCTTTACTGAAAAAGGATGCAGTTCAGAAATTGGTGAAATTCTTTCAATGCTGTCCAGAACAGCATTTTGTGCACATATTGGAGCCCTTCTTAAAAATTATCACCAAATCATCACGCATTAATACAACGTTAGCTGTAAATGGTTTAACACCATTGCTCATTGCAAGGCTGGATCATCAAGATGCCATAGCTCGTCTTAATCTGCTTAAACTCATAAAGGCTGTTTACGAGCACCACCCACGGCCAAAGCAATTGATTGTGGAGAATGATTTGCCTCAGAAGCTGCAGAATTTAATAGAGGAACGAAGAGATGGACAACGTTCTGGTGGGCAGGTTTTGGTGAAACAAATGGCGACGTCTCTCCTTAAAGCACTTCATATTAACACCGTTTTGTAA | 4320 | 41.78 | SNSDSALMSRQAASSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKSLLSHPWIQNCKRNLHNSLRHSGTLRNIQEDVSADAEISKIDNQSSCERPLTSKAELVNSDIKADASKELLSTVCDMKTSDKDHGSDSTFPEDRRGYQPEDISADQAPILTVNKKSTLVTSSAQPSSSKEVVTSESTEFYEPSHSNVESLMNGDFESPESKRKNTSNKHGGKGTSLHITGRSFGFGSKSRENSSQKNSKASVTLEGNELSRFSDTPGDASLDDLFHPLDKQPADQIVEASTSSSACNLNQINVSVADAGKNDLATKLRATIAQKQMETVMGQTNGGSDLLRLMMGVLKDDMIDIDGLVFDEKLPGENPFQLQAFEFSRLVGLLRPEEPEDVIESVCRKLITIFHQQSEQKLVYVTQHGLLPLMELLEVPKPRVICSVLQLINQIVKDNTDFQENACLVGLIPLVMGFAVPDRPREVRMEAANFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYRDMVHLAIDGMWQIFKLQRSTPTNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGGGLPVDGLTQRPRSGQLDSSHPIFSQTEPSASPSDQPDLTKAGHGIIDFHMSTGIQETSFASSSNSQRLDINQPDHRHISADADRFQSNGTMEASFTSKLPELKSLDKDVGLPSKDPSASASKERENLDRWKVDPSRVDGEIRQQRTATSANRTSIDKSPKVMESTSNGFSVAAAASLDQVRPFLSLLDKEPPSRHFSGQLEYVRHLSGLERHESILPLLHASNETKTNGELDFLMAEFADVSQRGKENGSLDSVARISNKTVTKKVGPLSSNDVAASISGVVSQTASGVLSGSGVLNARPGSAASSGLLSHMVSTLNADVARDYLAKVADLLLEFALADTTVKCYMCSQSLLSRLLQMFNRVEPPILLKILMCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMHFIMSDSPLKRYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL | 1439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1152668 | 1172480 | + | Bda009845.1 | Bda12g00128 | 17143 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00128 | 1439 | Gene3D | - | 1086 | 1434 | IPR011989 | - | |
Bda12g00128 | 1439 | SMART | serkin_6 | 27 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g00128 | 1439 | Gene3D | Transferase(Phosphotransferase) domain 1 | 24 | 313 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 375 | 419 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 343 | 492 | - | - | |
Bda12g00128 | 1439 | CDD | STKc_Cdc7_like | 26 | 274 | - | - | |
Bda12g00128 | 1439 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 275 | IPR011009 | - | |
Bda12g00128 | 1439 | ProSiteProfiles | Protein kinase domain profile. | 27 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 800 | 834 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 446 | 480 | - | - | |
Bda12g00128 | 1439 | SUPERFAMILY | ARM repeat | 593 | 788 | IPR016024 | - | |
Bda12g00128 | 1439 | ProSitePatterns | Protein kinases ATP-binding region signature. | 33 | 56 | IPR017441 | GO:0005524 | |
Bda12g00128 | 1439 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 9 | 1395 | - | - | |
Bda12g00128 | 1439 | Gene3D | - | 582 | 791 | IPR011989 | - | |
Bda12g00128 | 1439 | SUPERFAMILY | ARM repeat | 1100 | 1413 | IPR016024 | - | |
Bda12g00128 | 1439 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 140 | 152 | IPR008271 | GO:0004672|GO:0006468 | |
Bda12g00128 | 1439 | PANTHER | MAP KINASE KINASE KINASE | 9 | 1395 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 911 | 933 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 934 | 955 | - | - | |
Bda12g00128 | 1439 | Pfam | Protein kinase domain | 28 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g00128 | 1439 | PRINTS | Tyrosine kinase catalytic domain signature | 243 | 265 | IPR001245 | GO:0004672|GO:0006468 | |
Bda12g00128 | 1439 | PRINTS | Tyrosine kinase catalytic domain signature | 96 | 109 | IPR001245 | GO:0004672|GO:0006468 | |
Bda12g00128 | 1439 | PRINTS | Tyrosine kinase catalytic domain signature | 200 | 222 | IPR001245 | GO:0004672|GO:0006468 | |
Bda12g00128 | 1439 | PRINTS | Tyrosine kinase catalytic domain signature | 134 | 152 | IPR001245 | GO:0004672|GO:0006468 | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 899 | 955 | - | - | |
Bda12g00128 | 1439 | SMART | arm_5 | 622 | 662 | IPR000225 | GO:0005515 | |
Bda12g00128 | 1439 | SMART | arm_5 | 1219 | 1258 | IPR000225 | GO:0005515 | |
Bda12g00128 | 1439 | SMART | arm_5 | 1132 | 1172 | IPR000225 | GO:0005515 | |
Bda12g00128 | 1439 | SMART | arm_5 | 1173 | 1217 | IPR000225 | GO:0005515 | |
Bda12g00128 | 1439 | SMART | arm_5 | 707 | 750 | IPR000225 | GO:0005515 | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 804 | 829 | - | - | |
Bda12g00128 | 1439 | MobiDBLite | consensus disorder prediction | 343 | 366 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00128 | Bda-Chr12:1152668 | Bda01g01685 | Bda-Chr1:52913601 | 1.22E-61 | dispersed | |
Bda09g00279 | Bda-Chr9:3462378 | Bda12g00128 | Bda-Chr12:1152668 | 4.26E-26 | transposed | |
Bda12g00128 | Bda-Chr12:1152668 | Bda05g00425 | Bda-Chr5:49958850 | 5.54E-30 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69957 | PF00069 | Pkinase | 1.20E-67 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00128 | - | - | qsu:112005715 | 2197.55 |