Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00128 TCGAACTCCGATTCGGCTCTCATGTCTCGCCAAGCGGCGTCGTCGGCTTTCCATAAGTCGAAGACTCTCGACAATAAATATATGCTTGGAGATGAGATCGGCAAGGGGGCATATGGCCGAGTTTACAAAGGTTTGGATTTGGAGAATGGGGACTTTGTTGCCATTAAGCAAGTTTCATTGGAGAATATTGCTCAGGAGGATCTCAATATTATTATGAATTTAAATCACAAAAACATTGTCAAATATCTTGGATCTTCAAAAACCAAGACTCATCTTCACATAATACTTGAGTATGTGGAGAATGGTTCCCTTGCCAATATAATAAAGCCAAACAAGTTTGGTCCTTTTCCAGAATCATTGGTTGCTGTTTACATCAGTCAGGTTTTGGAAGGATTGGTTTATCTCCATGAACAGGGTGTTATTCATCGGGACATTAAAGGTGCAAACATACTGACAACCAAAGAGGGTCTTGTGAAACTAGCTGATTTTGGCGTTGCAACGAAGTTGAATGAGGCTGATGTTAATACACACTCAGTCGTTGGAACACCTTATTGGATGGCCCCAGAGGTGATTGAAATGTCGGGAGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGATGCACGGTCATTGAACTTCTTACATGTGTTCCTCCTTATTACGATCTGCAGCCCATGCCAGCGCTTTTCCGGATTGTTCAGGACAAACACCCTCCAATCCCAGATAGCCTCTCTCCGGATATCACAGATTTTCTTCGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCAGATGCAAAATCATTACTTTCTCATCCCTGGATTCAAAATTGTAAGCGCAATTTGCACAATTCTCTCCGTCACAGTGGGACATTGAGAAATATTCAGGAAGATGTTTCCGCTGATGCAGAAATTTCTAAAATAGATAATCAAAGCTCTTGCGAAAGACCTTTGACTAGTAAAGCTGAACTAGTTAATTCTGATATCAAAGCAGATGCCAGCAAGGAGTTATTGTCAACGGTCTGTGACATGAAAACATCTGATAAAGATCATGGCTCAGATTCTACCTTCCCTGAGGACAGAAGAGGTTACCAACCAGAAGATATCTCAGCGGATCAGGCTCCTATTTTAACCGTAAACAAAAAATCAACTCTGGTGACTAGTTCTGCTCAACCTTCTTCTAGTAAGGAAGTGGTTACGTCTGAATCAACTGAGTTTTATGAGCCGTCGCACAGTAATGTTGAATCACTGATGAATGGTGATTTTGAATCCCCTGAATCCAAAAGAAAAAACACGTCCAATAAACATGGAGGAAAAGGAACATCCCTGCATATTACTGGTAGATCATTTGGTTTTGGGTCAAAAAGTCGAGAAAATAGTTCACAGAAGAATTCAAAGGCATCTGTTACCTTGGAAGGAAATGAACTGAGTAGGTTTAGTGACACTCCAGGAGATGCTTCCTTGGATGATTTATTCCATCCATTGGATAAACAACCAGCGGATCAGATCGTCGAAGCATCAACATCTAGTTCTGCATGTAATCTGAATCAAATAAATGTATCTGTAGCTGATGCTGGTAAAAATGATCTGGCCACAAAGTTGAGAGCTACAATTGCTCAAAAGCAAATGGAAACTGTAATGGGTCAAACAAATGGTGGGAGTGACCTGTTGCGCTTAATGATGGGTGTTCTAAAGGATGATATGATTGATATTGATGGCTTGGTGTTTGATGAAAAGTTGCCTGGAGAAAACCCTTTCCAGCTACAGGCTTTTGAGTTTAGCAGATTAGTTGGATTATTGAGACCTGAGGAACCTGAAGATGTGATTGAGTCTGTTTGTCGGAAGCTTATCACAATCTTTCATCAACAATCTGAGCAGAAGCTTGTTTATGTCACCCAACATGGTTTGCTTCCTCTAATGGAATTGCTAGAGGTCCCTAAACCTCGAGTAATCTGTTCGGTGCTTCAACTTATAAACCAGATAGTTAAAGATAATACTGACTTTCAAGAAAATGCATGTCTTGTTGGTCTGATTCCTTTGGTGATGGGTTTTGCTGTACCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCGAATTTCTTGCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTTATTGCTTGTCGTGGAATACCTGTGTTGGTGGGGTTTTTGGAAGCTGATTATGCAAAATACAGGGATATGGTTCATTTAGCCATTGATGGCATGTGGCAGATTTTTAAGCTCCAGAGATCAACTCCTACAAATGATTTCTGTCGTATAGCAGCAAAAAATGGAATACTGCTCAGGCTTATTAACACCCTGTATAGTCTGAATGAGGCAACTCGTCTAGCATCGATATCTGTTGGGGGTGGATTGCCAGTTGATGGTTTAACGCAGCGGCCGCGATCTGGCCAACTTGATTCTAGTCATCCTATATTCAGTCAGACTGAGCCTTCAGCTTCTCCATCAGATCAGCCTGATCTTACTAAGGCTGGGCATGGAATAATCGATTTTCACATGTCCACTGGGATACAAGAAACTTCATTTGCTTCATCATCAAATTCTCAAAGATTAGACATCAATCAACCAGATCACCGACACATTTCCGCAGACGCTGATAGATTTCAATCCAATGGTACAATGGAAGCTTCTTTTACATCTAAATTGCCAGAGCTGAAATCTTTGGATAAAGATGTAGGTTTACCATCGAAAGATCCATCTGCTAGTGCGTCTAAAGAACGAGAAAACTTAGATAGATGGAAAGTTGACCCTTCTCGAGTAGATGGTGAAATAAGACAGCAACGGACAGCCACTTCAGCGAATAGGACATCAATTGATAAGTCACCGAAAGTAATGGAATCTACATCAAATGGGTTCTCTGTTGCAGCTGCTGCTTCACTAGACCAAGTGCGCCCCTTTCTAAGTTTGTTAGACAAGGAGCCCCCTTCCCGACATTTTTCTGGTCAGCTTGAGTATGTGCGCCACCTCTCTGGATTGGAGAGACATGAAAGCATATTACCTCTGTTGCATGCATCTAATGAAACAAAGACAAATGGTGAACTTGATTTTCTAATGGCAGAATTTGCAGATGTTTCTCAGCGTGGAAAAGAAAATGGAAGCCTGGACTCTGTTGCTAGAATTTCCAACAAAACAGTAACGAAGAAGGTCGGACCATTATCATCTAATGATGTCGCAGCCTCTATCTCAGGGGTTGTGTCTCAAACTGCATCCGGTGTGCTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGGAGTGCAGCGTCCTCTGGGTTGCTTTCACACATGGTTTCGACTTTAAATGCAGATGTTGCTAGGGATTACCTGGCAAAAGTTGCAGATCTTCTGCTTGAATTTGCTCTGGCTGATACAACCGTGAAGTGTTACATGTGTAGCCAAAGTTTGCTTAGTCGTCTTCTCCAGATGTTCAATAGAGTAGAGCCCCCAATTCTATTAAAGATATTGATGTGTATAAACCATCTGTCAACTGATCCAAATTGCTTGGAGAACCTTCAGCGGGCTGATGCCATTAAATATTTGATCCCAAATCTTGAACTCAAAGAAGGATCTCTAGTGTCTCAAATACATCATGAGGTTCTCAATGCACTATTTAACTTGTGCAAGATAAATAAGAGAAGACAGGAACAGGCTGCCGAAAATGGAATCATTCCCCATTTGATGCATTTTATTATGTCAGATTCCCCACTGAAGAGATATGCGTTGCCTCTGCTATGCGATATGGCTCATGCATCTCGTAATTCGAGAGAGCAGTTAAGAGCTCATGGAGGTTTGGATGTCTACTTGAGCCTTCTTGAGGATGAGCTTTGGTCAGTGACGGCCTTGGATTCTATTGCTGTTTGTCTGGCTCATGACAATGACAACCGAAAGGTTGAACAGGCTTTACTGAAAAAGGATGCAGTTCAGAAATTGGTGAAATTCTTTCAATGCTGTCCAGAACAGCATTTTGTGCACATATTGGAGCCCTTCTTAAAAATTATCACCAAATCATCACGCATTAATACAACGTTAGCTGTAAATGGTTTAACACCATTGCTCATTGCAAGGCTGGATCATCAAGATGCCATAGCTCGTCTTAATCTGCTTAAACTCATAAAGGCTGTTTACGAGCACCACCCACGGCCAAAGCAATTGATTGTGGAGAATGATTTGCCTCAGAAGCTGCAGAATTTAATAGAGGAACGAAGAGATGGACAACGTTCTGGTGGGCAGGTTTTGGTGAAACAAATGGCGACGTCTCTCCTTAAAGCACTTCATATTAACACCGTTTTGTAA 4320 41.78 SNSDSALMSRQAASSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKSLLSHPWIQNCKRNLHNSLRHSGTLRNIQEDVSADAEISKIDNQSSCERPLTSKAELVNSDIKADASKELLSTVCDMKTSDKDHGSDSTFPEDRRGYQPEDISADQAPILTVNKKSTLVTSSAQPSSSKEVVTSESTEFYEPSHSNVESLMNGDFESPESKRKNTSNKHGGKGTSLHITGRSFGFGSKSRENSSQKNSKASVTLEGNELSRFSDTPGDASLDDLFHPLDKQPADQIVEASTSSSACNLNQINVSVADAGKNDLATKLRATIAQKQMETVMGQTNGGSDLLRLMMGVLKDDMIDIDGLVFDEKLPGENPFQLQAFEFSRLVGLLRPEEPEDVIESVCRKLITIFHQQSEQKLVYVTQHGLLPLMELLEVPKPRVICSVLQLINQIVKDNTDFQENACLVGLIPLVMGFAVPDRPREVRMEAANFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYRDMVHLAIDGMWQIFKLQRSTPTNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGGGLPVDGLTQRPRSGQLDSSHPIFSQTEPSASPSDQPDLTKAGHGIIDFHMSTGIQETSFASSSNSQRLDINQPDHRHISADADRFQSNGTMEASFTSKLPELKSLDKDVGLPSKDPSASASKERENLDRWKVDPSRVDGEIRQQRTATSANRTSIDKSPKVMESTSNGFSVAAAASLDQVRPFLSLLDKEPPSRHFSGQLEYVRHLSGLERHESILPLLHASNETKTNGELDFLMAEFADVSQRGKENGSLDSVARISNKTVTKKVGPLSSNDVAASISGVVSQTASGVLSGSGVLNARPGSAASSGLLSHMVSTLNADVARDYLAKVADLLLEFALADTTVKCYMCSQSLLSRLLQMFNRVEPPILLKILMCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMHFIMSDSPLKRYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1152668 1172480 + Bda009845.1 Bda12g00128 17143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00128 1439 Gene3D - 1086 1434 IPR011989 -
Bda12g00128 1439 SMART serkin_6 27 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00128 1439 Gene3D Transferase(Phosphotransferase) domain 1 24 313 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 375 419 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 343 492 - -
Bda12g00128 1439 CDD STKc_Cdc7_like 26 274 - -
Bda12g00128 1439 SUPERFAMILY Protein kinase-like (PK-like) 24 275 IPR011009 -
Bda12g00128 1439 ProSiteProfiles Protein kinase domain profile. 27 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00128 1439 MobiDBLite consensus disorder prediction 800 834 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 446 480 - -
Bda12g00128 1439 SUPERFAMILY ARM repeat 593 788 IPR016024 -
Bda12g00128 1439 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Bda12g00128 1439 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 9 1395 - -
Bda12g00128 1439 Gene3D - 582 791 IPR011989 -
Bda12g00128 1439 SUPERFAMILY ARM repeat 1100 1413 IPR016024 -
Bda12g00128 1439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bda12g00128 1439 PANTHER MAP KINASE KINASE KINASE 9 1395 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 911 933 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 934 955 - -
Bda12g00128 1439 Pfam Protein kinase domain 28 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00128 1439 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Bda12g00128 1439 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Bda12g00128 1439 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Bda12g00128 1439 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Bda12g00128 1439 MobiDBLite consensus disorder prediction 899 955 - -
Bda12g00128 1439 SMART arm_5 622 662 IPR000225 GO:0005515
Bda12g00128 1439 SMART arm_5 1219 1258 IPR000225 GO:0005515
Bda12g00128 1439 SMART arm_5 1132 1172 IPR000225 GO:0005515
Bda12g00128 1439 SMART arm_5 1173 1217 IPR000225 GO:0005515
Bda12g00128 1439 SMART arm_5 707 750 IPR000225 GO:0005515
Bda12g00128 1439 MobiDBLite consensus disorder prediction 804 829 - -
Bda12g00128 1439 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00128 Bda-Chr12:1152668 Bda01g01685 Bda-Chr1:52913601 1.22E-61 dispersed
Bda09g00279 Bda-Chr9:3462378 Bda12g00128 Bda-Chr12:1152668 4.26E-26 transposed
Bda12g00128 Bda-Chr12:1152668 Bda05g00425 Bda-Chr5:49958850 5.54E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69957 PF00069 Pkinase 1.20E-67 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00128 - - qsu:112005715 2197.55