Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00154 ATGGTTGATCAGTCGCCATACCCAACTATTGTACAGAAGGTGGCTGGCCAGCTCAACCTTCCTTCTTCTCTCACCCCATATCATCAGGGTTGTGATCGTGTTTTCCAGCGACCTGCTATGTATCAAAGGCTTGCGACTTTTGGAAATTACTCAAACCCTGCAATGCCACTGTCACGCAGAATCCCAACTGATGTTTCAAGTGTTGCAGTAACTTCCTCTGCCATATTCGTCCCAGCACCTGCAGAGAAAAGCAACTTTCTCATTGACTTCCTTATGGGTGGAGTCTCTGGTGCGGTATCTAAGACAGCTGCTGCTCCACTTGAGCGTATGAAGCTTTTAATTCAAAATCAAGATGAGCTGATCAGGTCTGGCAGGCTTTCTGAACCCTACAAGGGCATTGGTGATTGTCTCCGCCGAACAATCAAAGACGAGGGTGTGGTTGCACTGTGGAGGAGTAATACTGTTAATGTCATGCGCTACTTCCCCACTCAGGCGAGTTATATCTTTTGGGCTCTGAACTTTGCATTCAAGGACCACTTTAAGAGCCTTTTCAACTTTAAGAAAGAAAGAGATGGATATTGGAAATGGTTTGCTGGCAACTTGGCTTCAGGTGGTGCAGCTGGTGCTTCGTCCCTTCTCTTTGTCTATTCCCTTGACTATGCTCGAACCCGATTGGCCAACGACGCCAAGGCTGCAAAGAAGGGAGGTGAAAGACAATTCAATGGCGTGATTGATGTTTACAGGAAGACATTACAATCTGATGGCGTTGCTGGGCTCTACCGTGGATTCAACATTTCATGCGTTGGTATCATTATCTATCGAGGTCTTTACTTTGGAATGTATGATTCTCTCAAGCCTGTCTTGTTGATTGGAAAGTTGCAGGATAGCTTTTTGGCGAGCTTCGCCCTTGGTTGGGTTGTTACTAATGGCGCGGCACTTGCTTCGTACCCGATCGACACAGTTCGCAGAAGAATGATGATGACGTCTGGTGAAGCAGTGAAGTACAAGAGCTCCTTGGATGCATTTTCTCACATTCTGAAGAACGAGGGTCCGAAATCTCTCTTCAAGGGTGCCGGTGTGAATATTCTTCGAGCTGTTGCCGGAGCTGGTGTCCTCGCCGGTTATGATAAGTTGCAAGTCCTCGCACTTGGTAAGAAGTATGGATCTGGTGGGGCTTAA 1179 47.16 MVDQSPYPTIVQKVAGQLNLPSSLTPYHQGCDRVFQRPAMYQRLATFGNYSNPAMPLSRRIPTDVSSVAVTSSAIFVPAPAEKSNFLIDFLMGGVSGAVSKTAAAPLERMKLLIQNQDELIRSGRLSEPYKGIGDCLRRTIKDEGVVALWRSNTVNVMRYFPTQASYIFWALNFAFKDHFKSLFNFKKERDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGVIDVYRKTLQSDGVAGLYRGFNISCVGIIIYRGLYFGMYDSLKPVLLIGKLQDSFLASFALGWVVTNGAALASYPIDTVRRRMMMTSGEAVKYKSSLDAFSHILKNEGPKSLFKGAGVNILRAVAGAGVLAGYDKLQVLALGKKYGSGGA 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1375098 1376887 - Bda009874.1 Bda12g00154 17169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00154 392 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 392 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 Gene3D Mitochondrial carrier domain 87 388 IPR023395 -
Bda12g00154 392 SUPERFAMILY Mitochondrial carrier 83 377 IPR023395 -
Bda12g00154 392 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 PRINTS Adenine nucleotide translocator signature 195 208 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 PRINTS Adenine nucleotide translocator signature 169 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 PRINTS Adenine nucleotide translocator signature 300 316 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda12g00154 392 Pfam Mitochondrial carrier protein 194 288 IPR018108 -
Bda12g00154 392 Pfam Mitochondrial carrier protein 296 380 IPR018108 -
Bda12g00154 392 Pfam Mitochondrial carrier protein 84 186 IPR018108 -
Bda12g00154 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 183 IPR018108 -
Bda12g00154 392 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 392 - -
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 304 326 IPR002067 GO:0055085
Bda12g00154 392 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Bda12g00154 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 295 381 IPR018108 -
Bda12g00154 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 287 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00154 Bda-Chr12:1375098 Bda15g00897 Bda-Chr15:14682227 0 dispersed
Bda12g00154 Bda-Chr12:1375098 Bda12g00155 Bda-Chr12:1378087 0 tandem
Bda10g00725 Bda-Chr10:41677475 Bda12g00154 Bda-Chr12:1375098 0 wgd
Bda12g00154 Bda-Chr12:1375098 Bda05g00462 Bda-Chr5:50973577 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00154 K05863 - zju:107417672 599.356