Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00161 ATGGAAATAGCTACAATGGATAGTACTGCGAAGTCGCCGGAGGGTGGGGAAGATCGGACGGCGACCGGAGTTCAACCGATCAAGCCTTTACCCTTCAGCAATGGTCTTTTAAAGAGGCATAATCGTCTTAATCATGACAACCTCAACTCCGCCGCTAACTCCGCCGTCGTTTCCTACAAAGAATGCCTGAAAAACCATGCGGCTAGCTTAGGAACTCACGCTTTAGATGGGTGTGGAGAATTCATTCCTTCTCCTTCTGCAACTTCTTCCGATCCCACTTCTTTAAAATGCGCCGCTTGCGGATGTCACCGGAACTTCCACCGCCGCGAGCCCGAAGAGCCGATTTTTCCGGCCCCAACAACACAAGTAATCGAGTACCAGCCTCACCACCGCCACCACCCGCCTCCACCCCCTCAGCCGATCAGCCGGAGTCCGAATTCGGCGTCGCCTCCGCCGATCTCGTCTTCCTACTACCCCTCAGCTCCCCACATGCTTCTGGCTCTATCATCTGGGCTATCGGCCCCTCCGGATCCGACTAATCCGTTCTCGAATGGTCGGAAACGATTCAGAACTAGATTCAGCCTGGATCAGAAAGAGAAAATGCACCAGTTTGCCGAGAGAGTTGGGTGGAGGATGCAGAAGAGAGACGAAGAACTGGTTCAAGAATTCTGCAATGAAATTGGCGTGGAAAAAGTGGTTTTTAAAGTATGGATGCACAATAACAAAAACTCATCTAGCAAGAAGGACGTTAATGGCGGAACGAATACTCTAGAACTCGCTCAAAACGACAACAACTTCGTCGGGAATCTCAATCGCTACGACGACGATGAAAGGGTACATCCCGCCATTAATGGGTCTTCTTCTTCTTCCTGA 873 50.86 MEIATMDSTAKSPEGGEDRTATGVQPIKPLPFSNGLLKRHNRLNHDNLNSAANSAVVSYKECLKNHAASLGTHALDGCGEFIPSPSATSSDPTSLKCAACGCHRNFHRREPEEPIFPAPTTQVIEYQPHHRHHPPPPPQPISRSPNSASPPPISSSYYPSAPHMLLALSSGLSAPPDPTNPFSNGRKRFRTRFSLDQKEKMHQFAERVGWRMQKRDEELVQEFCNEIGVEKVVFKVWMHNNKNSSSKKDVNGGTNTLELAQNDNNFVGNLNRYDDDERVHPAINGSSSSS 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1551063 1551935 - Bda009883.1 Bda12g00161 17176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00161 290 MobiDBLite consensus disorder prediction 133 147 - -
Bda12g00161 290 Gene3D - 179 248 - -
Bda12g00161 290 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 110 IPR006456 -
Bda12g00161 290 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 186 243 IPR006455 -
Bda12g00161 290 MobiDBLite consensus disorder prediction 1 36 - -
Bda12g00161 290 MobiDBLite consensus disorder prediction 127 156 - -
Bda12g00161 290 SUPERFAMILY Homeodomain-like 176 245 IPR009057 -
Bda12g00161 290 Pfam ZF-HD protein dimerisation region 57 111 IPR006456 -
Bda12g00161 290 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 5 268 - -
Bda12g00161 290 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
Bda12g00161 290 MobiDBLite consensus disorder prediction 268 290 - -
Bda12g00161 290 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 5 268 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01353 Bda12g00161 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00161 Bda-Chr12:1551063 Bda13g01690 Bda-Chr13:40265752 1.14E-94 dispersed
Bda12g00161 Bda-Chr12:1551063 Bda07g01353 Bda-Chr7:16358501 2.37E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16757 PF04770 ZF-HD_dimer 1.10E-28 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00161 - - jre:108984667 318.546