Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00203 ATGGCGTTTCTGTTTATACCCATGTTTAGATCAGTCTCCAAGTTCTTAAGTTGTACCATTTTGGTCGAGCTCCTTCTTTTCTTCGCAAGCTTTACTTCGACAGAAGCATATGATGCGCTTGATCCAACTGCAAACATCACCATCAAATGGGACATTATTGCTTGGACTGCTGATGGCTACGTGGCTACCGTGACGATATACAACTTTCAGCAATATCGTCATGTTCAGGCGCCGGGATGGTTGCTAGGATGGACGTGGGCGAAGAGGGAGATAATCTGGAGCATGTTGGGAGGTCAAGCCACGGAGCAAGGAGATTGCTCGAGATTTAAGGGGAATATTCCTCATTGCTGCAAAAAGAATCCGACCGTCGTTGATCTTCTGCCCGGAACCCCTTACAACCAACAAGTTGCCAATTGTTGTAGAGGTGGGGTACTTGCCTCGTGGGTTCAAGACCCGGCCAACTCGGCTAGCTCGTTTCAACTCAATGTCGGTTCTTCAGGAACCACCAATAAGACAGTGAGAGTGCCGAAGAACTTCACTTTGCATGCACCGGGGCCTGGATATACTTGTGGACCTGGAAAGATAGTTAAACCGAGTAAATTTATGACCACAGATAAAAGAAGAGTCACACAAGCGTTGATGACATGGAACGTTACATGCACATATTCACAATTTCTGGCTGAGAGAACTCCTACTTGTTGCGTCTCACTGTCGTCTTTCTACAATCGCACGATTGTCTCCTGCCCGACATGCTCCTGTGGTTGCCAAAGCAATATAAGTCGGTCTGGTGGCTGTATTGCGGAAAAATCGTCACATTTGGCATCGGTCGTTTCAAATCCCGGCACAAAAAATACGCCTATGATTCAATGTACGAGCCATATGTGTCCGATTAGAGTTCATTGGCATGTCAAACTCAACTATAAAGAATATTGGCGGGTAAAGATTACAGTCACTAATTTCAATTACGCGATGAACTATTCCTGA 984 45.73 MAFLFIPMFRSVSKFLSCTILVELLLFFASFTSTEAYDALDPTANITIKWDIIAWTADGYVATVTIYNFQQYRHVQAPGWLLGWTWAKREIIWSMLGGQATEQGDCSRFKGNIPHCCKKNPTVVDLLPGTPYNQQVANCCRGGVLASWVQDPANSASSFQLNVGSSGTTNKTVRVPKNFTLHAPGPGYTCGPGKIVKPSKFMTTDKRRVTQALMTWNVTCTYSQFLAERTPTCCVSLSSFYNRTIVSCPTCSCGCQSNISRSGGCIAEKSSHLASVVSNPGTKNTPMIQCTSHMCPIRVHWHVKLNYKEYWRVKITVTNFNYAMNYS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2010972 2012775 - Bda009930.2 Bda12g00203 17218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00203 327 PIRSF COBRA 8 327 IPR006918 GO:0010215|GO:0031225
Bda12g00203 327 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Bda12g00203 327 PANTHER COBRA-LIKE PROTEIN 12 326 - -
Bda12g00203 327 PANTHER PROTEIN COBRA 12 326 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00203 Bda-Chr12:2010972 Bda15g01047 Bda-Chr15:19498647 1.77E-97 dispersed
Bda12g00203 Bda-Chr12:2010972 Bda12g00205 Bda-Chr12:2018623 1.88E-154 proximal
Bda12g00203 Bda-Chr12:2010972 Bda07g01033 Bda-Chr7:12187795 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00203 - - pvy:116109720 572.007