Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00232 ATGGATACTCGCCGAGCTTCTCGCACTGTAATTGATCCCAAAGTTCGACAAGTTGGATTCTTCGCTCCCGGTGCCTCTCCCTACCGGTCGCAGCACGGCCCGTCCGATAGGAGGGCCTCTTCCTCTTTGTCTCCTCCGGTTAACGATATTTCTCCCTCTGGTAACTCGCTTTCCCCTGTAATGATTCCACCTCCGCTCCCGGTTCCTTTCTCTCCTGTTGCTACCTCTCCTCTGCGACGTGACTCTTTCACCGCTGGTACCTTCAGCGCGTCGGAGTTGTTTCCAGCTACGTCTCCCACTGTATCTAACGCGAGTAAAACTGTGGGGGATCGTGGGTTTTCCGACGATGTTTTTTTGTCTCCTAATCGAGCTCCTAGAGGCAGTTTTGTGAAAACGGTGCTTGCTTCCTCCTCGTTTCCTAGTGGGGGGTTTGATCTGACAGCAGTGAAACGGAGTAGCGTTCCATCGAAAAAATCTGGAGGAGTGTCAATTGAGATACAAAACGATCAACCGGCAACCTCCAAACCATTGAAAGAGAAAACCACGAAAGCTGAAAGGCGTGCGCTTCAAGAGTCTCAGCGAGCTGCTAAAGCTGCTACAAAAGCTGAAGGAAGTAAGATGCCGGCAGCTGCTTCGGTGGGAAAGCCAGCTCCAGCCAATGTAAAGCCTGCTAAATCTGGAAAAGCTCCTGTACAAAAAAACGATAGTGCTTCTGTTGCAGCATCTGAGAAGAAGGGAGGAGAACGCCCACCAGAGAAAGAAAGAAAGAAAGATGTCCCTCCTCCCCGAATGCAATATGATGATAAAAGCCGTGTGGAAAAGGCAAAACGACGTTCAGTTGTGAAACAAACTGAAGCTAGAAATAGAGTTGAGTTATTCCGACATTTGCCTCAGTATGAACATGGCACTCAGCTTCCTGACCTTGAGTCAAAGTTTTTTCAACTTGATACTGTACATCCTGCTGTTTACAAGGTTGGATTGCAGTATTTATCGGGAGATATATGTGGTGGTAATGCTCGATGTATTGCAATGCTTAAAGCATTTCAAGAAGCAATTAAAGACTATGTGACACCACCTGAAAAAACTCTCAGTAGAGACCTAACTGCCAAAATAAGTAGTTACGTTTCATTTTTCACTGAGTGTAGGCCTCTTTCAATCAGTATGGGGAATGCAATTAGATTTCTCAAAAGTAGAATTGCAAGTTTACCTTTGAATTTGTCTGAATCCGAGGCAAAAGTTTCTCTTCAGACAGATATTGATCGTTTTATAAATGAGAAGATTGTTCTCGCAGACAAGGTGATAGTCAAACACGCTGTGTCAAAAATTCGTGACGGTGACGTACTTCTCACTTTTGGGTCGTCTTGTGCGGTCGAACTATTACTATTAGAAGCTCATGAGCTTGGCAGACACTTTCGAGTTGTCGTAGTGGACTCTCGTCCAAAGCTTGAAGGGAAGCTTTTACTTCGAAGGTTGGTTGGGAAAGGCATTACATGTACTTACACCCACATAAATGCAATTTCTTATGTCATGCATGAAGTTACTCGAGTCTTTCTTGGTGCTTCGTCGGTTTTGTCTAATGGAACAGTTTACTCGAGAGTTGGTACGGCATGTGTTGCTATGGTAGCTCATGCATTTCGTGTGCCAGTCTTAGTTTGTTGTGAAGCATACAAGTTTCACGAAAGGGTACAGCTTGATTCTATATGCAGCAATGAGCTTGGTAATCCAGATGCTATTTCAAAAGTTTCTGGTAGAGAGGAAATCAATTCTTTGTCTGGTTTGGCAGATACCGACAGTTTACAGCTTCTCAATCTGATATACGATGCGATGCCATCGGATTACATCTCTATGATAATCACAGATTATGGCATGGTCCCACCGACCAGTGTGCCTGCCATTGTACGAGAGCATCGGCGGGAACAGCTATTGATATAG 1932 45.03 MDTRRASRTVIDPKVRQVGFFAPGASPYRSQHGPSDRRASSSLSPPVNDISPSGNSLSPVMIPPPLPVPFSPVATSPLRRDSFTAGTFSASELFPATSPTVSNASKTVGDRGFSDDVFLSPNRAPRGSFVKTVLASSSFPSGGFDLTAVKRSSVPSKKSGGVSIEIQNDQPATSKPLKEKTTKAERRALQESQRAAKAATKAEGSKMPAAASVGKPAPANVKPAKSGKAPVQKNDSASVAASEKKGGERPPEKERKKDVPPPRMQYDDKSRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPDLESKFFQLDTVHPAVYKVGLQYLSGDICGGNARCIAMLKAFQEAIKDYVTPPEKTLSRDLTAKISSYVSFFTECRPLSISMGNAIRFLKSRIASLPLNLSESEAKVSLQTDIDRFINEKIVLADKVIVKHAVSKIRDGDVLLTFGSSCAVELLLLEAHELGRHFRVVVVDSRPKLEGKLLLRRLVGKGITCTYTHINAISYVMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSICSNELGNPDAISKVSGREEINSLSGLADTDSLQLLNLIYDAMPSDYISMIITDYGMVPPTSVPAIVREHRREQLLI 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2449035 2452489 - Bda009969.1 Bda12g00232 17247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00232 643 MobiDBLite consensus disorder prediction 152 281 - -
Bda12g00232 643 SUPERFAMILY NagB/RpiA/CoA transferase-like 289 636 IPR037171 -
Bda12g00232 643 MobiDBLite consensus disorder prediction 33 57 - -
Bda12g00232 643 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 643 - -
Bda12g00232 643 MobiDBLite consensus disorder prediction 176 192 - -
Bda12g00232 643 Pfam Initiation factor 2 subunit family 335 626 IPR000649 GO:0044237
Bda12g00232 643 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 643 - -
Bda12g00232 643 MobiDBLite consensus disorder prediction 1 65 - -
Bda12g00232 643 Gene3D - 430 637 IPR042529 -
Bda12g00232 643 MobiDBLite consensus disorder prediction 245 281 - -
Bda12g00232 643 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01886 Bda-Chr1:55032435 Bda12g00232 Bda-Chr12:2449035 1.98E-17 dispersed
Bda12g00232 Bda-Chr12:2449035 Bda15g00651 Bda-Chr15:9958601 0 dispersed
Bda12g00232 Bda-Chr12:2449035 Bda06g00494 Bda-Chr6:7025917 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00232 K03680 - zju:107416570 880.552