Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00261 ATGAAGCCCCGAAAATCTATCCTGTCTTCCTGGTTCATCGCTACCTTTCTCGTTTCAGTGCTGTTTCTCGTCGTTGAATCGGATCTTTCGTCGGATAGAGAAGCTCTGTTGACCCTCCGGCGGTCGGTGAAAGGTCGGCCGCTTCTCTGGAATATCTCCGAGTCTTCACCATGTTCGTGGCCTGGAGTTACCTGCGTCGGAGGGAGAGTCTCAGAGCTCCGGTTACCCGGAATGGGTCTCTCCGGTTCACTTCCTCTCGGCCTTGGAAACCTTTCCGAGCTCCAGACCTTGTCTGTTCGTCTCAACTCTCTCTCTGGATCTCTCCCCTCCGATTTGGCAAACCTTCAATCGCTGCAATACCTCTATTTGCAGGGCAACTCGTTTTCCGGTGAGATTCCTGATTTTCTTCTCAATTTAAAGTCGATGGTTAGATTAGTTATGGCACAGAACAAGTTTTCTGGTGAGATACCGGCTGGATTTAGTAATCTCCCTTTATTGACGACTCTGTATTTGGAGGACAATGAGTTCACTGGTTCAATTCCTGAATTAACTAATCCAAATCTTGGTCAATTCAACGTCTCATTCAATCGTTTAAACGGTGAGATCCCATCTAAGTTTTCGACACTCTCTGCAAGCGCATTCGAAGGAAATTCCCTCTGTGGAATGCCGTTGAAATCTTGCGACAGGAACAAGAAATTATCCGGCGGAGCAATCGCTGGAATTGTTATAGGGTGCCTAATTTTTATAATAATCGTCGTACTTCTGATATTCTTATGCCGGAGAAAGAAGGGTGAAAAATCAAATTCTAAGGAATTGACATCGTCAGCAATTTCTACGACGGAGACTGAACTTCCCCGTGAAAAAGCAGTGGGAAGCAGTGACAGTATGAGCAGTGATTTATCTGGAATTGATAAGAGGAAAGTGAAGGGTGGAGGGGGAAAGCGCTTGATATTTTTTGGAAATGTTCCTAAAGAGTTTGATTTGGAGGATTTGCTGAGGGCTTCTGCAGAGGTTTTAGGAAAAGGATCGTCCGGGACGGCGTATAAGGCGATCTTGGAGACTGGAATGGCAGTGGCGGTGAAAAGGTTGAAGGATGTTTCTGCATCGGAGAAGGAATTCCGAGAGAAGATCGAAGAAATCGGAAGAATAAATCATGAAAATTTGGTTCATTTGAAAGCTTACTATTACAGCAAGGATGAAAAGCTTCTGGTTTATGATTACATTCCCATGGGAAGCTTATCTGCACTTCTTCATGGTAGCAAAGAGGTTGGAAGGAGTCCATTAAGTTGGGAAGCAAGAATCAAAATCGCCCTCGGAGCATCCCGAGCCTTACAACACCTCCATCTGCAAGGACATAACATATCTCACGGAAACATCAAGTCGTCAAACGTCCTTCTCGACGCCTCCTACGCCCCACACGTCTCCGACTTCGGTCTGGCTCAGCTCATCAGCCCGGCCTCTGCCCCAAACCGAGTAGCCGGATATCGAGCCCCGGAAGTCACTGATCCACGTAAAATTTCCCAAAAGGCCGACGTCTACAGCTTTGGCGTGTTACTTTTAGAGTTACTCACCGGTAAGGCTCCGACTTATTCCTTATCTAACGAAGAAGGTGTGGACCTGCCAAGATGGGTTCAGTCTGTCGTTCAGGAGGAGTGGACGGCCGAGGTCTTCGATGTTGAGCTTTTGAGGTACCAAAACGTCGAGGAGGAGATGGTTCAGCTTTTGCAAATCGGGTTGCTATGTGCAGCTCCTTATCCGGATAATCGGCCTTCGATGGTGGAAGTCACGAGCAGGATCGAAGAGCTTTGTGGAGCCACTCTACGGAAAGAGCAAGAAGCAGGTAATAACAACTCCTATGATGCTGATATTGGAGTTTTGCCATAG 1884 47.03 MKPRKSILSSWFIATFLVSVLFLVVESDLSSDREALLTLRRSVKGRPLLWNISESSPCSWPGVTCVGGRVSELRLPGMGLSGSLPLGLGNLSELQTLSVRLNSLSGSLPSDLANLQSLQYLYLQGNSFSGEIPDFLLNLKSMVRLVMAQNKFSGEIPAGFSNLPLLTTLYLEDNEFTGSIPELTNPNLGQFNVSFNRLNGEIPSKFSTLSASAFEGNSLCGMPLKSCDRNKKLSGGAIAGIVIGCLIFIIIVVLLIFLCRRKKGEKSNSKELTSSAISTTETELPREKAVGSSDSMSSDLSGIDKRKVKGGGGKRLIFFGNVPKEFDLEDLLRASAEVLGKGSSGTAYKAILETGMAVAVKRLKDVSASEKEFREKIEEIGRINHENLVHLKAYYYSKDEKLLVYDYIPMGSLSALLHGSKEVGRSPLSWEARIKIALGASRALQHLHLQGHNISHGNIKSSNVLLDASYAPHVSDFGLAQLISPASAPNRVAGYRAPEVTDPRKISQKADVYSFGVLLLELLTGKAPTYSLSNEEGVDLPRWVQSVVQEEWTAEVFDVELLRYQNVEEEMVQLLQIGLLCAAPYPDNRPSMVEVTSRIEELCGATLRKEQEAGNNNSYDADIGVLP 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2791372 2794132 - Bda009999.1 Bda12g00261 17276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00261 627 SUPERFAMILY L domain-like 44 212 - -
Bda12g00261 627 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Bda12g00261 627 Gene3D Phosphorylase Kinase; domain 1 305 407 - -
Bda12g00261 627 MobiDBLite consensus disorder prediction 269 298 - -
Bda12g00261 627 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Bda12g00261 627 PANTHER OS05G0588300 PROTEIN 13 603 - -
Bda12g00261 627 ProSiteProfiles Protein kinase domain profile. 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00261 627 PANTHER LRR RECEPTOR-LIKE KINASE 13 603 - -
Bda12g00261 627 Pfam Protein kinase domain 336 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00261 627 MobiDBLite consensus disorder prediction 270 298 - -
Bda12g00261 627 Gene3D Transferase(Phosphotransferase) domain 1 408 623 - -
Bda12g00261 627 CDD STKc_IRAK 339 602 - -
Bda12g00261 627 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Bda12g00261 627 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Bda12g00261 627 SUPERFAMILY Protein kinase-like (PK-like) 337 598 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00472 Bda-Chr10:37756360 Bda12g00261 Bda-Chr12:2791372 1.65E-92 dispersed
Bda12g00261 Bda-Chr12:2791372 Bda14g00946 Bda-Chr14:7599154 0 dispersed
Bda12g00261 Bda-Chr12:2791372 Bda11g01808 Bda-Chr11:53163949 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69961 PF00069 Pkinase 1.30E-38 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00261 - - cit:102624899 721.465