Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00353 | ATGGAAGCGAATGAAAACCCACTCAGCCCCTACTACCACCTCCAGCAGCAGCACCACCACCACCAGAGCCCCACCACTGCGTCAACCACCGCTACCATCTTCACGTCATCCACCAATGGCCTTCTTCCAAGTGCCCTTCATATGTCTTCTCCGGCCACTGCGACAACCACTGACACAGGGGCCCACATGCTCTACCCTCATTCTGCGCCGTCTGCGGCGGTGTCTCAGTCCCCGTTGGAATCTGTCCGGCGGAAGAGAGGGAGACCCAGAAAGTATGGCACCCCAGAAGAGGCTTTAGCCGCGAAGAAAGCTGCGACCGCCTCCGCCCATTCTTCCACTTCGAGGGAGAAGAAGCACCGGGGTTCTTCTTTTGCTCCTTCTGCCTCTTCGTTTTCTGAATCTTCGAAGAAATACCAACTAGGTGCTCTCGGAAACGCTGGACAAGGTTTCACACCACACGTACTCAATGTTGCAGCCGGTGAGGACGTGGGCCAAAAAATTATGTTGTTCATGCAACAAAGTAAGCGGGAAATGTGTGTTCTTTCTGCATCAGGGTCAATCTCTAATGCAGCTCTCCGACAGCCAGCTACATCGGGAGGCAATATCGCATATGAGGGTCGTTTTGAGATTATCTCACTAAGTGGATCATATGTGCGAACTGATCTCGGAGGGAGGACCGGTGGCCTCAGTGTATGTCTGTCCAGTGCCGATGGCCAAATCGTTGGGGGAGGAGTTGGTGGGCCTTTGAAAGCCTTAGGACCCGTTCAGGTCATTGTGGGTACATTTCAAATGGACTCAAAGAAAGAAGCAATCAGCGGAGCGAAAGGCGATGCAGCTGTAAGCAAGTTGCCATCAATCGGTGGCCTATCAGGATCAAGTTTAGGCTATCGTTCAACAATCGAGCCATCTGGGAGAAATCCCATGAGGGGAAACGACGATCATCAAGTAATGGGCAGTAGCCATTTTATCCTTCAACCCCATGCTGTACACTTATCTTCACGAACCACCGATTGGAGGAGCGGTTCAGATCCTACTGCCACCGCGGGTTATGAATTGGCAGTGAGAGTCGGTCGCGGGCCAAACCAATCTCGAGAAAACGGAGACTACGATCAGATGCCGGACTAG | 1125 | 52.62 | MEANENPLSPYYHLQQQHHHHQSPTTASTTATIFTSSTNGLLPSALHMSSPATATTTDTGAHMLYPHSAPSAAVSQSPLESVRRKRGRPRKYGTPEEALAAKKAATASAHSSTSREKKHRGSSFAPSASSFSESSKKYQLGALGNAGQGFTPHVLNVAAGEDVGQKIMLFMQQSKREMCVLSASGSISNAALRQPATSGGNIAYEGRFEIISLSGSYVRTDLGGRTGGLSVCLSSADGQIVGGGVGGPLKALGPVQVIVGTFQMDSKKEAISGAKGDAAVSKLPSIGGLSGSSLGYRSTIEPSGRNPMRGNDDHQVMGSSHFILQPHAVHLSSRTTDWRSGSDPTATAGYELAVRVGRGPNQSRENGDYDQMPD | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 4068711 | 4073364 | + | Bda010092.1 | Bda12g00353 | 17368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00353 | 374 | ProSiteProfiles | PPC domain profile profile. | 146 | 284 | IPR005175 | - | |
Bda12g00353 | 374 | MobiDBLite | consensus disorder prediction | 353 | 374 | - | - | |
Bda12g00353 | 374 | MobiDBLite | consensus disorder prediction | 45 | 130 | - | - | |
Bda12g00353 | 374 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 152 | 263 | IPR005175 | - | |
Bda12g00353 | 374 | MobiDBLite | consensus disorder prediction | 294 | 316 | - | - | |
Bda12g00353 | 374 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 26 | 365 | IPR039605 | GO:0003680 | |
Bda12g00353 | 374 | Gene3D | - | 152 | 276 | - | - | |
Bda12g00353 | 374 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 | 26 | 365 | - | - | |
Bda12g00353 | 374 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 148 | 262 | - | - | |
Bda12g00353 | 374 | MobiDBLite | consensus disorder prediction | 45 | 62 | - | - | |
Bda12g00353 | 374 | CDD | DUF296 | 151 | 262 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00353 | Bda-Chr12:4068711 | Bda15g00752 | Bda-Chr15:11110255 | 2.24E-47 | dispersed | |
Bda12g00353 | Bda-Chr12:4068711 | Bda11g00244 | Bda-Chr11:2898066 | 1.66E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00353 | - | - | mnt:21407278 | 419.083 |