Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00355 ATGGCAGAATTAGATGCAAGGAGAGCTGAGGTTCTCAGGAATGCCGCAAATACTATTCAGAGACGTGCACGAACTCACATTGCTCAAAAACATTTTATTGCAATGCGAAAGGCTACCATCCTCGTGCAATCAATGTGGCGAGGAAGACTGGCTTGCATACTTTTCGAGAGCCTGAAGAAGGAAGCAGCTGCTGTAAAAATTCAGAGGAATGTTCGTAGATTCCAAACTAGAAAACTCTATAATAAGCTCCACGTGTCAGTACTTGTCTTGCAAACAGGATTAAGGGGAATGGCTGCTAGGAAAGAATTTAGATTTAGGAAGCAAAGAAAAGCATCAATCATCATTCAGACTCGTTGGCGGTGCCATAGAGATGCCTCGTATTATAAAAAGCTTAAGAGAGGTTCAATAGTCACACAATGCCGATGGAGGGGAAGAGTTGCCAAGAAGGAGCTTAGAAAGCTCAAAATGGCTGCGAGGGAAACGGGTGCACTTCAAGAAGCAAAAGATAAGTTGGAAAAGACTGTGGAAGATCTTACTTGGCGGTTACAGCTGGAAAAACGTCTAAGGACGGACCTAGAAGAAGCAAAAGCACAAGAGGTTGGAAAATTGCAGAATTCATTGCAAGAAATGCAAAATAAAGTTGATCAAACGAATGCACTGCTTGTAAAAGCACGGGAAGATGCAAAGAAGGCGGCGGAGGAAGCGCTCCCTGTTATAAAAGATACCCAAGTAATTGTTGAAGACACCAAGAAAGTTGATTTTCTTACTGAAGAAGTGGAAAACCTAAAGACTTCGCTAGAGTCAGAGAAAAGTAGAGCCGATGAATGTGATAGGAAATACCAGGAAGCACACCAAACTAGCGAAGAACGACGTAAAATGTTAGAAGAGGTAGATAGAAAAGCTCAGCAACTCCAGGAATCTTTGCATAGGCTAGAAGAGAAGCTTGCTAATTTAGAATCAGAGAATAAAGTTCTACGTCAACAAGCCGTGTCCATGGCTCCTAATAAGTTCCTTTCGGGACGCACAAGATCAATTATTCAGAGGGGTCCTGAAAGCAGCCATGTTGTAGGGGATGGAAAGCCAGCATTGGATCTGCATAGTTCTTCAATTAATCACAGGGAATCTGAAGTAGATGATAGACCACAGAAATCCCTGAATGAAAAACAGCAAGACAACCAAGAATTGCTCATAAGATGTATCGCACAACATCTAGGCTTTTCAGGAAATAGACCCATTGCTGCCTGTATCATTTACAAATGCCTTTTGCAATGGCGATCATTTGAAGTTGAGCGTACCAGTGTTTTCGATCGAATAATTCAGACTATAGGCCATGCCATTGAGACACAGGATAATAATGATGTCTTGGCTTATTGGTTATCCAATGCGTCAACACTACTATTACTTCTTCAGCGTACATTGAAAGCCAGTGGTGCTGCCGGAATGGCTCCACAGCGTCGTCGATCATCATCAGCTACGTTGTTTGGGAGGATGACTCAAAGTTTCCGAGGAGCTCCGCAAGGAGTCAACTTATCCCTGATCGATGGTGGTTTGAGCGGCATTGACTCTTTGAGACAAATAGAAGCAAAATATCCTGCCTTGCTTTTTAAGCAGCAACTCACAGCATATGTAGAAAAGATCTATGGAATGATTAGAGATAATTTGAAGAAAGAAATTTCTCCATTGCTGGGGTTGTGCATCCAGGCACCTAGAACATCGAGGGCAAGCTTGGTTAAGGGATCTTCCCGCTCGGTTGCAAACATTGAGGCCCAACGGATTCTTATTGCGCATTGGCAAGGAATTGTGAAGGGCCTCGGAAATTTTTTAGACACCTTGAAAGCAAATCATGTTCCGCCCTTTTTAGTTCGAAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTACAACTATTCAACAGTCTTCTATTACGACGAGAATGTTGTTCGTTTAGCAACGGTGAATACGTCAAAGCGGGGCTAGCTGAGCTGGAGCATTGGTGTTACAAAGCAACCGACGAGTATGCAGGGGCAGCTTGGGATGAGCTCAAGCATATCAGACAAGCCATTGGATTTCTGGTTATACATCAAAAGCCAAAGAAGACACTTGATGAAATCAGCCACGATCTCTGCCCGGTGCTTAGTATACAACAACTGTATCGTATCAGTACAATGTACTGGGACGACAAATATGGCACGCTTAGCGTATCCCCCGATGTTATATCCAATATGAGGGTGTTGATGACTGAAGATTCCAATCATGCTGTCAGTAATTCTTTCCTCCTGGATGATGATTCAAGCATTCCGTTTTCCGTTGATGATTTGTCGAAATCGATGGAACAAATAGACATTTTGGACATCGATCCACCACCGCTAATTCGCGAGAACTCCGGCTTTAGTTTTCTGTTGCCTCTCACGGATTAA 2418 42.93 MAELDARRAEVLRNAANTIQRRARTHIAQKHFIAMRKATILVQSMWRGRLACILFESLKKEAAAVKIQRNVRRFQTRKLYNKLHVSVLVLQTGLRGMAARKEFRFRKQRKASIIIQTRWRCHRDASYYKKLKRGSIVTQCRWRGRVAKKELRKLKMAARETGALQEAKDKLEKTVEDLTWRLQLEKRLRTDLEEAKAQEVGKLQNSLQEMQNKVDQTNALLVKAREDAKKAAEEALPVIKDTQVIVEDTKKVDFLTEEVENLKTSLESEKSRADECDRKYQEAHQTSEERRKMLEEVDRKAQQLQESLHRLEEKLANLESENKVLRQQAVSMAPNKFLSGRTRSIIQRGPESSHVVGDGKPALDLHSSSINHRESEVDDRPQKSLNEKQQDNQELLIRCIAQHLGFSGNRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLIDGGLSGIDSLRQIEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANIEAQRILIAHWQGIVKGLGNFLDTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGAAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTLSVSPDVISNMRVLMTEDSNHAVSNSFLLDDDSSIPFSVDDLSKSMEQIDILDIDPPPLIRENSGFSFLLPLTD 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4099685 4105733 + Bda010094.1 Bda12g00355 17370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00355 805 Gene3D - 62 109 - -
Bda12g00355 805 Gene3D - 110 159 - -
Bda12g00355 805 Gene3D - 9 61 - -
Bda12g00355 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Bda12g00355 805 SMART DIL_2 623 730 IPR002710 -
Bda12g00355 805 Coils Coil 193 234 - -
Bda12g00355 805 PANTHER MYOSIN 1 802 - -
Bda12g00355 805 ProSiteProfiles IQ motif profile. 83 112 IPR000048 GO:0005515
Bda12g00355 805 ProSiteProfiles IQ motif profile. 35 64 IPR000048 GO:0005515
Bda12g00355 805 MobiDBLite consensus disorder prediction 367 384 - -
Bda12g00355 805 Pfam IQ calmodulin-binding motif 62 80 IPR000048 GO:0005515
Bda12g00355 805 Pfam IQ calmodulin-binding motif 36 51 IPR000048 GO:0005515
Bda12g00355 805 Pfam IQ calmodulin-binding motif 13 32 IPR000048 GO:0005515
Bda12g00355 805 ProSiteProfiles IQ motif profile. 60 87 IPR000048 GO:0005515
Bda12g00355 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 160 IPR027417 -
Bda12g00355 805 MobiDBLite consensus disorder prediction 348 384 - -
Bda12g00355 805 Coils Coil 154 188 - -
Bda12g00355 805 Coils Coil 287 328 - -
Bda12g00355 805 SMART iq_5 11 33 IPR000048 GO:0005515
Bda12g00355 805 SMART iq_5 130 152 IPR000048 GO:0005515
Bda12g00355 805 SMART iq_5 59 81 IPR000048 GO:0005515
Bda12g00355 805 SMART iq_5 82 104 IPR000048 GO:0005515
Bda12g00355 805 SMART iq_5 107 129 IPR000048 GO:0005515
Bda12g00355 805 SMART iq_5 34 56 IPR000048 GO:0005515
Bda12g00355 805 Pfam DIL domain 624 727 IPR002710 -
Bda12g00355 805 ProSiteProfiles Dilute domain profile. 436 748 IPR002710 -
Bda12g00355 805 PANTHER MYOSIN-11 1 802 - -
Bda12g00355 805 CDD MyosinXI_CBD 387 771 IPR037975 GO:0007015
Bda12g00355 805 Coils Coil 252 279 - -
Bda12g00355 805 ProSiteProfiles IQ motif profile. 131 160 IPR000048 GO:0005515
Bda12g00355 805 ProSiteProfiles IQ motif profile. 12 39 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01348 Bda-Chr1:49198409 Bda12g00355 Bda-Chr12:4099685 0 dispersed
Bda02g00381 Bda-Chr2:44180204 Bda12g00355 Bda-Chr12:4099685 0 dispersed
Bda12g00355 Bda-Chr12:4099685 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda12g00355 Bda-Chr12:4099685 Bda07g01187 Bda-Chr7:14290412 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00355 K10357 - csv:101206606 1333.93