Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00373 | AGAAGATCTGATGTGTTGAATCAGTTCGGAGGTGTAAATGATTTGGCGGCGATTCTTGAAACTGACGTTATAAAAGGAGTTCCCGGTACTGAGACTGATCTTGCTCTAAGGAAGAGTCTCTTTGGTTCGAATACGTTCGAGAAACCACCCGCCAAAGTTTTTTTGAAATTTGTTCTTGAAGCGTTGAGCGACCCGACGATCATTATTCTCTTAATCTGCGCAACTTTTGCTCTCGGCTTCGGAATCAAACAGCACGGTTGGGGCGATGGATGGTTTGACGGCGGGAGTATCATTTTCGCCGTCTTTCTCGTAGTCATGATCTCTTCCATAAGTAACTACAATCAATCTCGACAGTTCGTGAAGCTTTCGGCCAAGAGCGGCGACATAAAGGTTGAAGTGGTGAGAAGAGGACGGAGGCAATCCATCTCCATCTTCGACGTTGTGGTGGGGGATCTCGTGTGTTTGAACATCGGAGGTCAAGTACCTGCAGATGGATTGTACTTGGAAGGAACTCCGTTAATGGTGGACGAGTCGAGCATGACTGGGGAGAGTGATCATGTGGAGGTCAATCACATCAATAATCCTTTCTTGCTATCTGGGACAAAGGTAATGGATGGCTATGGCATTATGCTAGTCACTTCTGTCGGGATGAACACAGCCTGGGGCGAGATGATGAGCACGGTAAGCCGTGAAGTGAATGAGGAAACTCCCTTGCAAGAGCGTCTCAACAAAATGACATCTTACATAGGAAAAATTGGCCTCACTGTCGCTGTATTTGTTCTATTTGTTCTATCTATCCGTTATTTTACTGGGCACACCAGAGATGAGAAGGGAAATCGGGAATTTAACGGAAAAAAGACGAAATTTGACAATGTGATGAATGCTGTTATCGGAATCATCTCTGCAGCCGTGACGATTGTTGTTGTGGCTATCCCAGAAGGTTTGCCTCTGGCTGTTACTTTGACTCTTGCGTATTCAATGAAGAAGATGATGAGAGACAATGCCATGGTGAGAAAACTATCTGCATGTGAGACAATGGGGTCAGCCACGACAATATGCACAGACAAAACAGGCACGCTTACTCTTAACGAGATGAAAGTTACAAAGTTTTGGCTCGGAAAAGAAGAGATGAAGGATGATACCTCGAACATAGCTGCCAATATTCTCCGATTGCTGCAACAAGCCATTGGTCTAAACACTACTGGAAATGTTCATAGACAGATTTGTTCTTCACCTCCTGAGATTTCTGGCAGCCCAACAGAGAAGGCTTTACTTCTTTGGGCAGTGACCGAGCTGGATATGAACATTGATGAACTGAAGAAATGTAATGAAATTATCCACGTGGAGACCTTCAATTCAGAGAAAAAAAGAAGTGGAATTTTGATTTGGAACAATGAGAAGAAGACTCAGACTCACTGGAAAGGAGCTGCTGAGATAATATTAGCAATGTGTACGCATTATTATGATAAGGTGGGGACGGTAACAGCCATGGACGACGAGGAAAGAAGACAGCTTGATACAATCATATCGAACATGGCAGGGAAAAGCTTACGATGCATAGCCTTTGCTTGCAAAAAAGCTGAAGAAGAAAATGGGAATGTTCACCTCGATGAATCCGGTTTGATTTTACTAGGAATTGTGGGCTTGAAAGATCCATGTCGAGAAGGAGTTAAAATAGCCATTGAAGCTTGCAAAGCTGCAGGAGTGAATATCAAAATGATCACAGGTGATAATGTGCATACAGCCAGGGCAATAGCCATTGAATGTGGTATACTCAATATCAATGAAAGTCTAGACATTGATGCTGTGATAGAAGGATCTCAATTTAGAAATTACTCACCAGAAGAGAGAATGGAGAAGATTGACAAAATCAAAGTAATGGCTCGATCCTCCCCGTTCGACAAGCTGCAGATGGTGCAGACCTTGAAGGAGAAAGGCCACGTCGTAGCAGTCACGGGCGACGGAACAAACGATGCCCCTGCCTTAAAAGAAGCCGATATTGGACTTTCTATGGGAATTCAAGGCACTGAAGTGGCAAAAGAGAGCTCGGATATAGTAATTCTGGACGACAATTTCACATCTGTGATGACAGTTTTGAGGTGGGGAAGATGTGTTTATAACAACATTCAGAAATTTATCCAATTTCAGCTCACCGTCAATGTCGCCGCCCTCGCAATCAACTTCGTTGCAGCTTTATCTTCCGGAAAAGTCCCTCTAACAGCAGTTCAGCTCCTGTGGGTGAATCTCATAATGGACACTCTAGGAGCTTTAGCTCTGGCCACTGAACAACCAAGTGACGATCTCATGGAAACCCCACCGGTCGGACGAACCGAGCCGTTGATCACCCGAGTCATGTGGAGAAACCTCATTGCTCAGGCCCTTTACCAAGTAACCATCTTACTAATCTTAGAATTCAAGGGAAGATCCATCTTCAACGTGAACGAAGCTGTCAAGAACACACTCATTTTCAACACCTTCGTCCTCTGCCAAATCTTTAACGAGTTCAACGCAAGGAAGCTGGAGAAGAAGAACATATTCAAAGGGCTACATAAAAATAAGCTCTTTTTAGCCATTGTTGGAATCACCATTGTTCTTCAACTGGTAATGGTTGAGTTCTTGAAGAAGTTTGCTAACACAGAGAGGCTGAATTGGGGCCAGTGGGGTGCTTGCACCGGCATCGCCGCATTATCTTGGCCGATCGGGTGGTTGGTCAAATGCATAATCATTTGA | 2730 | 44.32 | RRSDVLNQFGGVNDLAAILETDVIKGVPGTETDLALRKSLFGSNTFEKPPAKVFLKFVLEALSDPTIIILLICATFALGFGIKQHGWGDGWFDGGSIIFAVFLVVMISSISNYNQSRQFVKLSAKSGDIKVEVVRRGRRQSISIFDVVVGDLVCLNIGGQVPADGLYLEGTPLMVDESSMTGESDHVEVNHINNPFLLSGTKVMDGYGIMLVTSVGMNTAWGEMMSTVSREVNEETPLQERLNKMTSYIGKIGLTVAVFVLFVLSIRYFTGHTRDEKGNREFNGKKTKFDNVMNAVIGIISAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGKEEMKDDTSNIAANILRLLQQAIGLNTTGNVHRQICSSPPEISGSPTEKALLLWAVTELDMNIDELKKCNEIIHVETFNSEKKRSGILIWNNEKKTQTHWKGAAEIILAMCTHYYDKVGTVTAMDDEERRQLDTIISNMAGKSLRCIAFACKKAEEENGNVHLDESGLILLGIVGLKDPCREGVKIAIEACKAAGVNIKMITGDNVHTARAIAIECGILNINESLDIDAVIEGSQFRNYSPEERMEKIDKIKVMARSSPFDKLQMVQTLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVMTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAALSSGKVPLTAVQLLWVNLIMDTLGALALATEQPSDDLMETPPVGRTEPLITRVMWRNLIAQALYQVTILLILEFKGRSIFNVNEAVKNTLIFNTFVLCQIFNEFNARKLEKKNIFKGLHKNKLFLAIVGITIVLQLVMVEFLKKFANTERLNWGQWGACTGIAALSWPIGWLVKCIII | 909 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 4278000 | 4280729 | + | Bda010115.1 | Bda12g00373 | 17388 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00373 | 909 | PRINTS | H+-transporting ATPase (proton pump) signature | 505 | 523 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda12g00373 | 909 | PRINTS | H+-transporting ATPase (proton pump) signature | 652 | 668 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda12g00373 | 909 | PRINTS | H+-transporting ATPase (proton pump) signature | 684 | 709 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda12g00373 | 909 | Pfam | E1-E2 ATPase | 129 | 332 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 176 | 190 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 545 | 556 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 676 | 688 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 353 | 367 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 567 | 577 | - | - | |
Bda12g00373 | 909 | PRINTS | P-type cation-transporting ATPase superfamily signature | 652 | 671 | - | - | |
Bda12g00373 | 909 | SFLD | p-type atpase | 335 | 705 | IPR044492 | - | |
Bda12g00373 | 909 | SFLD | Haloacid Dehalogenase | 335 | 705 | - | - | |
Bda12g00373 | 909 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 10 | 908 | IPR023298 | - | |
Bda12g00373 | 909 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 359 | 557 | IPR023299 | GO:0000166 | |
Bda12g00373 | 909 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 4 | 899 | - | - | |
Bda12g00373 | 909 | Gene3D | - | 363 | 552 | IPR023299 | GO:0000166 | |
Bda12g00373 | 909 | Pfam | haloacid dehalogenase-like hydrolase | 350 | 666 | - | - | |
Bda12g00373 | 909 | CDD | P-type_ATPase_Ca_PMCA-like | 34 | 785 | - | - | |
Bda12g00373 | 909 | Gene3D | - | 60 | 906 | - | - | |
Bda12g00373 | 909 | PANTHER | CATION TRANSPORTING ATPASE | 4 | 899 | - | - | |
Bda12g00373 | 909 | SUPERFAMILY | HAD-like | 351 | 757 | IPR036412 | - | |
Bda12g00373 | 909 | SUPERFAMILY | Calcium ATPase, transduction domain A | 130 | 228 | IPR008250 | - | |
Bda12g00373 | 909 | Gene3D | - | 350 | 697 | IPR023214 | - | |
Bda12g00373 | 909 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 5 | 907 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Bda12g00373 | 909 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 355 | 361 | IPR018303 | - | |
Bda12g00373 | 909 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 623 | 733 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda12g00373 | 909 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 296 | 385 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda12g00373 | 909 | Gene3D | - | 33 | 229 | - | - | |
Bda12g00373 | 909 | Pfam | Cation transporter/ATPase, N-terminus | 11 | 76 | IPR004014 | - | |
Bda12g00373 | 909 | Pfam | Cation transporting ATPase, C-terminus | 737 | 906 | IPR006068 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00827 | Bda-Chr7:9759122 | Bda12g00373 | Bda-Chr12:4278000 | 1.14E-16 | dispersed | |
Bda09g01488 | Bda-Chr9:46698681 | Bda12g00373 | Bda-Chr12:4278000 | 7.95E-68 | dispersed | |
Bda10g00562 | Bda-Chr10:39610916 | Bda12g00373 | Bda-Chr12:4278000 | 0 | dispersed | |
Bda12g00373 | Bda-Chr12:4278000 | Bda12g01035 | Bda-Chr12:42089457 | 0 | dispersed | |
Bda15g00987 | Bda-Chr15:18283285 | Bda12g00373 | Bda-Chr12:4278000 | 3.34E-135 | dispersed | |
Bda12g00373 | Bda-Chr12:4278000 | Bda03g01554 | Bda-Chr3:54677413 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00373 | K01537 | - | qsu:111992620 | 1363.59 |