Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00373 AGAAGATCTGATGTGTTGAATCAGTTCGGAGGTGTAAATGATTTGGCGGCGATTCTTGAAACTGACGTTATAAAAGGAGTTCCCGGTACTGAGACTGATCTTGCTCTAAGGAAGAGTCTCTTTGGTTCGAATACGTTCGAGAAACCACCCGCCAAAGTTTTTTTGAAATTTGTTCTTGAAGCGTTGAGCGACCCGACGATCATTATTCTCTTAATCTGCGCAACTTTTGCTCTCGGCTTCGGAATCAAACAGCACGGTTGGGGCGATGGATGGTTTGACGGCGGGAGTATCATTTTCGCCGTCTTTCTCGTAGTCATGATCTCTTCCATAAGTAACTACAATCAATCTCGACAGTTCGTGAAGCTTTCGGCCAAGAGCGGCGACATAAAGGTTGAAGTGGTGAGAAGAGGACGGAGGCAATCCATCTCCATCTTCGACGTTGTGGTGGGGGATCTCGTGTGTTTGAACATCGGAGGTCAAGTACCTGCAGATGGATTGTACTTGGAAGGAACTCCGTTAATGGTGGACGAGTCGAGCATGACTGGGGAGAGTGATCATGTGGAGGTCAATCACATCAATAATCCTTTCTTGCTATCTGGGACAAAGGTAATGGATGGCTATGGCATTATGCTAGTCACTTCTGTCGGGATGAACACAGCCTGGGGCGAGATGATGAGCACGGTAAGCCGTGAAGTGAATGAGGAAACTCCCTTGCAAGAGCGTCTCAACAAAATGACATCTTACATAGGAAAAATTGGCCTCACTGTCGCTGTATTTGTTCTATTTGTTCTATCTATCCGTTATTTTACTGGGCACACCAGAGATGAGAAGGGAAATCGGGAATTTAACGGAAAAAAGACGAAATTTGACAATGTGATGAATGCTGTTATCGGAATCATCTCTGCAGCCGTGACGATTGTTGTTGTGGCTATCCCAGAAGGTTTGCCTCTGGCTGTTACTTTGACTCTTGCGTATTCAATGAAGAAGATGATGAGAGACAATGCCATGGTGAGAAAACTATCTGCATGTGAGACAATGGGGTCAGCCACGACAATATGCACAGACAAAACAGGCACGCTTACTCTTAACGAGATGAAAGTTACAAAGTTTTGGCTCGGAAAAGAAGAGATGAAGGATGATACCTCGAACATAGCTGCCAATATTCTCCGATTGCTGCAACAAGCCATTGGTCTAAACACTACTGGAAATGTTCATAGACAGATTTGTTCTTCACCTCCTGAGATTTCTGGCAGCCCAACAGAGAAGGCTTTACTTCTTTGGGCAGTGACCGAGCTGGATATGAACATTGATGAACTGAAGAAATGTAATGAAATTATCCACGTGGAGACCTTCAATTCAGAGAAAAAAAGAAGTGGAATTTTGATTTGGAACAATGAGAAGAAGACTCAGACTCACTGGAAAGGAGCTGCTGAGATAATATTAGCAATGTGTACGCATTATTATGATAAGGTGGGGACGGTAACAGCCATGGACGACGAGGAAAGAAGACAGCTTGATACAATCATATCGAACATGGCAGGGAAAAGCTTACGATGCATAGCCTTTGCTTGCAAAAAAGCTGAAGAAGAAAATGGGAATGTTCACCTCGATGAATCCGGTTTGATTTTACTAGGAATTGTGGGCTTGAAAGATCCATGTCGAGAAGGAGTTAAAATAGCCATTGAAGCTTGCAAAGCTGCAGGAGTGAATATCAAAATGATCACAGGTGATAATGTGCATACAGCCAGGGCAATAGCCATTGAATGTGGTATACTCAATATCAATGAAAGTCTAGACATTGATGCTGTGATAGAAGGATCTCAATTTAGAAATTACTCACCAGAAGAGAGAATGGAGAAGATTGACAAAATCAAAGTAATGGCTCGATCCTCCCCGTTCGACAAGCTGCAGATGGTGCAGACCTTGAAGGAGAAAGGCCACGTCGTAGCAGTCACGGGCGACGGAACAAACGATGCCCCTGCCTTAAAAGAAGCCGATATTGGACTTTCTATGGGAATTCAAGGCACTGAAGTGGCAAAAGAGAGCTCGGATATAGTAATTCTGGACGACAATTTCACATCTGTGATGACAGTTTTGAGGTGGGGAAGATGTGTTTATAACAACATTCAGAAATTTATCCAATTTCAGCTCACCGTCAATGTCGCCGCCCTCGCAATCAACTTCGTTGCAGCTTTATCTTCCGGAAAAGTCCCTCTAACAGCAGTTCAGCTCCTGTGGGTGAATCTCATAATGGACACTCTAGGAGCTTTAGCTCTGGCCACTGAACAACCAAGTGACGATCTCATGGAAACCCCACCGGTCGGACGAACCGAGCCGTTGATCACCCGAGTCATGTGGAGAAACCTCATTGCTCAGGCCCTTTACCAAGTAACCATCTTACTAATCTTAGAATTCAAGGGAAGATCCATCTTCAACGTGAACGAAGCTGTCAAGAACACACTCATTTTCAACACCTTCGTCCTCTGCCAAATCTTTAACGAGTTCAACGCAAGGAAGCTGGAGAAGAAGAACATATTCAAAGGGCTACATAAAAATAAGCTCTTTTTAGCCATTGTTGGAATCACCATTGTTCTTCAACTGGTAATGGTTGAGTTCTTGAAGAAGTTTGCTAACACAGAGAGGCTGAATTGGGGCCAGTGGGGTGCTTGCACCGGCATCGCCGCATTATCTTGGCCGATCGGGTGGTTGGTCAAATGCATAATCATTTGA 2730 44.32 RRSDVLNQFGGVNDLAAILETDVIKGVPGTETDLALRKSLFGSNTFEKPPAKVFLKFVLEALSDPTIIILLICATFALGFGIKQHGWGDGWFDGGSIIFAVFLVVMISSISNYNQSRQFVKLSAKSGDIKVEVVRRGRRQSISIFDVVVGDLVCLNIGGQVPADGLYLEGTPLMVDESSMTGESDHVEVNHINNPFLLSGTKVMDGYGIMLVTSVGMNTAWGEMMSTVSREVNEETPLQERLNKMTSYIGKIGLTVAVFVLFVLSIRYFTGHTRDEKGNREFNGKKTKFDNVMNAVIGIISAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGKEEMKDDTSNIAANILRLLQQAIGLNTTGNVHRQICSSPPEISGSPTEKALLLWAVTELDMNIDELKKCNEIIHVETFNSEKKRSGILIWNNEKKTQTHWKGAAEIILAMCTHYYDKVGTVTAMDDEERRQLDTIISNMAGKSLRCIAFACKKAEEENGNVHLDESGLILLGIVGLKDPCREGVKIAIEACKAAGVNIKMITGDNVHTARAIAIECGILNINESLDIDAVIEGSQFRNYSPEERMEKIDKIKVMARSSPFDKLQMVQTLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVMTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAALSSGKVPLTAVQLLWVNLIMDTLGALALATEQPSDDLMETPPVGRTEPLITRVMWRNLIAQALYQVTILLILEFKGRSIFNVNEAVKNTLIFNTFVLCQIFNEFNARKLEKKNIFKGLHKNKLFLAIVGITIVLQLVMVEFLKKFANTERLNWGQWGACTGIAALSWPIGWLVKCIII 909
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4278000 4280729 + Bda010115.1 Bda12g00373 17388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00373 909 PRINTS H+-transporting ATPase (proton pump) signature 505 523 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g00373 909 PRINTS H+-transporting ATPase (proton pump) signature 652 668 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g00373 909 PRINTS H+-transporting ATPase (proton pump) signature 684 709 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g00373 909 Pfam E1-E2 ATPase 129 332 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 545 556 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 676 688 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 353 367 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 567 577 - -
Bda12g00373 909 PRINTS P-type cation-transporting ATPase superfamily signature 652 671 - -
Bda12g00373 909 SFLD p-type atpase 335 705 IPR044492 -
Bda12g00373 909 SFLD Haloacid Dehalogenase 335 705 - -
Bda12g00373 909 SUPERFAMILY Calcium ATPase, transmembrane domain M 10 908 IPR023298 -
Bda12g00373 909 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 359 557 IPR023299 GO:0000166
Bda12g00373 909 PANTHER CALCIUM-TRANSPORTING ATPASE 4 899 - -
Bda12g00373 909 Gene3D - 363 552 IPR023299 GO:0000166
Bda12g00373 909 Pfam haloacid dehalogenase-like hydrolase 350 666 - -
Bda12g00373 909 CDD P-type_ATPase_Ca_PMCA-like 34 785 - -
Bda12g00373 909 Gene3D - 60 906 - -
Bda12g00373 909 PANTHER CATION TRANSPORTING ATPASE 4 899 - -
Bda12g00373 909 SUPERFAMILY HAD-like 351 757 IPR036412 -
Bda12g00373 909 SUPERFAMILY Calcium ATPase, transduction domain A 130 228 IPR008250 -
Bda12g00373 909 Gene3D - 350 697 IPR023214 -
Bda12g00373 909 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 5 907 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda12g00373 909 ProSitePatterns E1-E2 ATPases phosphorylation site. 355 361 IPR018303 -
Bda12g00373 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 623 733 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g00373 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 296 385 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g00373 909 Gene3D - 33 229 - -
Bda12g00373 909 Pfam Cation transporter/ATPase, N-terminus 11 76 IPR004014 -
Bda12g00373 909 Pfam Cation transporting ATPase, C-terminus 737 906 IPR006068 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00827 Bda-Chr7:9759122 Bda12g00373 Bda-Chr12:4278000 1.14E-16 dispersed
Bda09g01488 Bda-Chr9:46698681 Bda12g00373 Bda-Chr12:4278000 7.95E-68 dispersed
Bda10g00562 Bda-Chr10:39610916 Bda12g00373 Bda-Chr12:4278000 0 dispersed
Bda12g00373 Bda-Chr12:4278000 Bda12g01035 Bda-Chr12:42089457 0 dispersed
Bda15g00987 Bda-Chr15:18283285 Bda12g00373 Bda-Chr12:4278000 3.34E-135 dispersed
Bda12g00373 Bda-Chr12:4278000 Bda03g01554 Bda-Chr3:54677413 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00373 K01537 - qsu:111992620 1363.59