Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00439 ATGGGGGTGTTCAATGAGGGAATGACACAGTTTCTGGTACCTGCGGCTGCGTTGCTAGGAATTGGGTTTGCTCTGTTTCAGTGGTTTTTGGTGTCGAAAGTGAAGGTGTCTAATGGCTATGGCATCGACGATGGCTACAAAGACAGATTGATTGAAGGAGGAGAAGAAGAAGAGGGCGTTGATAAGCTTGAGGTTGCTGTTAAATGTGCTGAAATCCAGAATGCTATTTCTGTCGGAGCTACCTCGTTTCTCTTCACTGAGTACAGATACCTCGGCATTTTCATGGCAGCGTTTGGAGCCGTCATCTTCTTCTTCCTCGGTTCAGTCAAAGGATTCAGCACCAAAAGCGAACCCTGCACTTACAACACAGGAAACATGTGTAAACCAGCTCTGGCGAACGCTATTTTCAGCACCATCGCCTTCTTGCTCGGAGCTCTTACATCAGTTCTTTCGGGTTTCCTCGGAATGAAGATTGCCACCTATGCTAATGCCAGAACAACTCTAGAGGCCCGTAAGGGAGTAGGAAAGGCATTCATCATAGCTTTTCGCTCCGGTGCAGTCATGGGGTTTCTTCTGGCTGCCAATGGCCTTCTTGTCTTGTATCTCTCCATCAATTTGTTTAAGCTCTATTATGGTGATGATTGGGAGGGCCTTTATGAATCCATCACTGGTTATGGACTCGGAGGTTCGTCAATGGCGCTCTTCGGGCGAGTCGGTGGAGGCATTTACACAAAGGCAGCAGATGTCGGTGCTGACCTTGTCGGTAAAGTCGAACGTAATATTCCCGAAGATGATCCTCGAAACCCAGCCGTCATAGCTGACAATGTGGGTGACAATGTGGGAGATATAGCAGGCATGGGCTCTGATCTGTTCGGATCCTATGCTGAATCAACCTGTGCAGCTCTATTCGTCGCATCGATATCGTCGTTTGGCATCACTCATGACTATACAGCCATGTCCTATCCTCTCATCGTCAGCTCGGTAGGCATCATAGTTTGCTTGATAACGACCCTTTTCGCGACCGATCTGTCTGAGATCAAGACCGTGGGTGAGATCGAACCGACGTTGAAGAGGCAACTTCTTATCTCGACTGTCTTGATGACCGCTGGAATTGGCTTGGTCAGTTTCTTTGCCTTGCCATCAGAATTCACCCTCTACAACTTCGGAACTGATAAAACTGTCAAAAACTGGTATCTGTTCTTCTGCGTTTCCATCGGTTTGTGGGCTGGACTTGTTATTGGGTACACAACAGAGTATTATACCAGTAATGCTTACAGCCCTGTGCAGGATGTGGCTGATTCGTGCCGGACTGGAGCTGCAACTAATGTGATCTTTGGTTTGGCTTTGGGTTATAAGTCTGTGATCATTCCCATATTTGCTATTGCTGTTGCCATTTATGTGAGCTTCAGCTTGGCTGCCATGTATGGAATCGCTGTTGCTGCCTTGGGAATGCTTAGCACCATTGCCACAGGCCTTGCCATTGATGCTTATGGTCCGATTAGTGATAATGCCGGTGGAATTGCTGAAATGGCCGGAATGAGCCACGAGATTCGCGAGAGAACTGATGCTTTGGATGCTGCTGGAAACACTACTGCAGCCATCGGCAAGTGTTTCGTAAATTTTAATGACGTTTCCGCCATTATTGTAGCCATCTCTGCGTCGAACACGGGCGGGGCATGGGACAACGCGAAGAAATACATAGAGGCCGGAGGAAACGAACACGCGAAGTCACTGGGACCGAAGGGGTCGGCGGCGCACAAGGCGGCGGTGATCGGAGACACGATCGGAGACCCTCTGAAGGACACGTCGGGGCCATCGCTGAACATTCTGATAAAGCTGATGGCGGTGGAGTCGTTAGTATTTGCGCCCTTCTTTGCGGCTCACGGTGGGCTCATCTTCAAGATTCTGGGCTGA 1914 49.22 MGVFNEGMTQFLVPAAALLGIGFALFQWFLVSKVKVSNGYGIDDGYKDRLIEGGEEEEGVDKLEVAVKCAEIQNAISVGATSFLFTEYRYLGIFMAAFGAVIFFFLGSVKGFSTKSEPCTYNTGNMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTTLEARKGVGKAFIIAFRSGAVMGFLLAANGLLVLYLSINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGITHDYTAMSYPLIVSSVGIIVCLITTLFATDLSEIKTVGEIEPTLKRQLLISTVLMTAGIGLVSFFALPSEFTLYNFGTDKTVKNWYLFFCVSIGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKCFVNFNDVSAIIVAISASNTGGAWDNAKKYIEAGGNEHAKSLGPKGSAAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKILG 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5393314 5396436 - Bda010195.1 Bda12g00439 17454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00439 637 Pfam Inorganic H+ pyrophosphatase 22 538 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 Pfam Inorganic H+ pyrophosphatase 542 621 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 544 636 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 PIRSF H+-PPtase 9 540 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 PIRSF H+-PPtase 537 634 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 538 - -
Bda12g00439 637 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 538 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00439 637 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 544 636 - -
Bda12g00439 637 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 538 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01297 Bda12g00439 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01037 Bda-Chr9:40552662 Bda12g00439 Bda-Chr12:5393314 2.76E-44 dispersed
Bda12g00439 Bda-Chr12:5393314 Bda13g00921 Bda-Chr13:10916979 2.05E-17 dispersed
Bda12g00465 Bda-Chr12:5806100 Bda12g00439 Bda-Chr12:5393314 0 transposed
Bda12g00439 Bda-Chr12:5393314 Bda07g01297 Bda-Chr7:15829473 1.24E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00439 K23025 - qsu:112028747 946.036