Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00443 ATGGTTTCAGAAGAAGAGCTTTTGGTACAACAAGTCTGCGAGCTGTACGACCAAATCTCAAGCCTCGAGAGCCTCAAACCAGGCAAAAATGTCGACGCACTCTTCAGCCAGCTGGTGCTGATTTGCATGCAGCCAAGCCCTCTTGACGTAGCCAAACTTTGCACGAGGGTTCAGCAAATCAGAGCCAAGCTCATTAAACTATGTGCTGAGGCTGAGGGTCTTTTAGAGAACCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAATCTCAGCCTTTTCCCTTACTATTCTAACTACCTCCAACTTAGCCTTCTCGAGTTCAACATTCTCACCCATTTTTGCCAAAACCCACCTGCCAAAATAGCTTTTATTGGGTCAGGTTCACTTCCTCTCACTTCCATTGTTTTAGCCTTAAACCACCTCCCCTCCACCACTTTTCACAACTATGATATCGACCCAGTAGCCAACTCAAAGGCACTTTCTTTGATTTCATCTCATCCTGACCTGTCAAAAAGAATGTTTTTTCACACTGCAGATGTAATGAACGTCACTGCTGTTCTTAAAGAGTATCAAGTAGTGTTTTTAGCTGCTTTAGTTGGTATGAATAAGGAGGAGAAAGTTGAAGTCATAGACCATTTGTGTAAGTATATGGCTCCTGGAGCTTATCTGATGGTTAGAAGTGCTCATGGAGCAAGGGCATTTCTTTACCCAGTGGTTGATTTTTGTGATTTTCAAGGGTTTGAGATTCTGTCTGTTTTTCATCCAACTGATGAGGTTATAAATTCAGTCATTATTGCGAGGAAAGATGAGCAAGGGCAAAACTCCATTGGAATGCCTAATAAGTGCTCTGAGATGGAGATCTTCAATATTCCAAAAATGGAGGAATCAGCCATGGAAGAGCAGCTTTCTTAA 921 42.24 MVSEEELLVQQVCELYDQISSLESLKPGKNVDALFSQLVLICMQPSPLDVAKLCTRVQQIRAKLIKLCAEAEGLLENHFSTILASFKNPLQNLSLFPYYSNYLQLSLLEFNILTHFCQNPPAKIAFIGSGSLPLTSIVLALNHLPSTTFHNYDIDPVANSKALSLISSHPDLSKRMFFHTADVMNVTAVLKEYQVVFLAALVGMNKEEKVEVIDHLCKYMAPGAYLMVRSAHGARAFLYPVVDFCDFQGFEILSVFHPTDEVINSVIIARKDEQGQNSIGMPNKCSEMEIFNIPKMEESAMEEQLS 306
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 5441861 5442781 + Bda010199.1 Bda12g00443 17458
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00443 306 PANTHER NICOTIANAMINE SYNTHASE 3 1 303 IPR004298 GO:0030410|GO:0030418
Bda12g00443 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Bda12g00443 306 Gene3D Vaccinia Virus protein VP39 7 272 IPR029063 -
Bda12g00443 306 PANTHER SYNTHASE, PUTATIVE-RELATED 1 303 - -
Bda12g00443 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 232 IPR029063 -
Bda12g00443 306 Pfam Nicotianamine synthase protein 4 273 IPR004298 GO:0030410|GO:0030418
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda01g01647 Bda12g00443 CCT
Bda07g01301 Bda12g00443 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01647 Bda-Chr1:52485267 Bda12g00443 Bda-Chr12:5441861 7.66E-145 dispersed
Bda01g01652 Bda-Chr1:52568496 Bda12g00443 Bda-Chr12:5441861 8.74E-145 dispersed
Bda02g00283 Bda-Chr2:41546197 Bda12g00443 Bda-Chr12:5441861 5.67E-95 dispersed
Bda07g01302 Bda-Chr7:15861505 Bda12g00443 Bda-Chr12:5441861 2.67E-175 dispersed
Bda12g00443 Bda-Chr12:5441861 Bda07g01301 Bda-Chr7:15857419 3.76E-133 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00443 K05953 - tcc:18600574 425.246