Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00454 ATGGATCCCAAAGGCTCAAAGCAGCCGCAGGAAGTGGTTCCCAATTTTTTGCAAGCTCGCCCCCAATCTCAGCTAGAATCAAATATGGCTGAAAATAAATCTTCTGAAATTAAGGATTTTCAGATTGTAGTAGCAGATAAAGAGGAGGGGAAGAAGCAATTAGCTCCAAAACGAAGCTCGAATAAAGATAGGCACACCAAGGTAGATGGTAGAGGTAGAAGGATAAGGATGCCAGCTCTGTGCGCAGCGAGGATTTTCCAATTGACCAGAGAATTAGGGCATAAATCAGATGGGGAAACCATACAGTGGCTTTTGCAACAGGCGGAGCCGTCGATAATTGCGGCTACCGGGACCGGAACTATCCCGGCTTCTGCTTTAGCGGCGGCCGGAGTATCTGTATCTCAGCAAGGGACCTCTTTATCAACTGGATTGCACCAAAAGATTGAGGATGATTTCGGAGGGTCAGGAAGTAGGACCAGTTGGGCTATGGTGGGTGGCAATTTGGGGAGACCACCACCCCATATGACTTCAGGGCTATGGCCTCCAGTCAGTAGCTTTGGGTTTCAGTCATCGTCTTCTCCGACAACAAATATGACACCCGAGAGTGCAAATTACCTCCAGAAGATCGGCTTCCCCGGATTTGACTTGCCAGTCGGGAATATCGGTCCGATGAGTTTCACCTCGATTCTGAGCAGCAATAGCCAGCAGCTGCCGGAGCTGGGGCTAGGGTTGTCGCCGGAAGGTCACATCGGAGTTTTGAATCCACAGGCTTTCAACCAGATTTATCAGCAGATGCGGCAGGCTAGAGTTCATCCGCAACATCACCAAGCTTCTCCAAAGGATGATTCTCAAGGTTCAGGCTCAGCCAACTAG 873 49.6 MDPKGSKQPQEVVPNFLQARPQSQLESNMAENKSSEIKDFQIVVADKEEGKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGVSVSQQGTSLSTGLHQKIEDDFGGSGSRTSWAMVGGNLGRPPPHMTSGLWPPVSSFGFQSSSSPTTNMTPESANYLQKIGFPGFDLPVGNIGPMSFTSILSSNSQQLPELGLGLSPEGHIGVLNPQAFNQIYQQMRQARVHPQHHQASPKDDSQGSGSAN 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5639184 5640056 - Bda010211.1 Bda12g00454 17469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00454 290 MobiDBLite consensus disorder prediction 266 290 - -
Bda12g00454 290 MobiDBLite consensus disorder prediction 11 34 - -
Bda12g00454 290 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 286 IPR005333 GO:0003700
Bda12g00454 290 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 29 286 - -
Bda12g00454 290 Pfam TCP family transcription factor 60 147 IPR017887 -
Bda12g00454 290 MobiDBLite consensus disorder prediction 48 71 - -
Bda12g00454 290 MobiDBLite consensus disorder prediction 1 34 - -
Bda12g00454 290 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00734 Bda-Chr3:6223483 Bda12g00454 Bda-Chr12:5639184 1.31E-34 dispersed
Bda12g00454 Bda-Chr12:5639184 Bda15g00574 Bda-Chr15:8942924 1.61E-39 dispersed
Bda13g01901 Bda-Chr13:43361036 Bda12g00454 Bda-Chr12:5639184 8.57E-122 transposed
Bda12g00454 Bda-Chr12:5639184 Bda07g01383 Bda-Chr7:16657666 2.24E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16779 PF03634 TCP 1.60E-31 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00454 - - jre:108987051 412.535