Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00465 ATGGGGGTGTTCAATGAGGGAATGACACAGTTTCTGGTACCTGCGGCTGCGTTGCTAGGAATTGGGTTTGCTCTGTTTCAGTGGTTTTTGGTGTCGAAAGTGAAGGTGTCTAATGGCTATGGCATCGACGATGACTACAAAGACAGATTGATTGAAGGAGGAGAAGAAGAAGAGGGCGTTGATAAGCTTGAGGTTGCTGTTAAATGTGCTGAAATCCAGAATGCTATTTCTGTCGGAGCTACCTCGTTTCTCTTCACTGAGTACAGATACCTCGGCATTTTCATGGCAGCGTTTGGAGCCGTCATCTTCTTCTTCCTCGGTTCAGTCAAAGGATTCAGCACCAAAAGCGAACCCTGCACTTACAACACAGGAAACATGTGTAAACCAGCTCTGGCGAACGCTATTTTCAGCACCATCGCCTTCTTGCTCGGAGCTCTTACATCAGTTCTTTCGGGTTTCCTCGGAATGAAGATTGCCACCTATGCTAATGCCAGAACAACTCTAGAGGCCCGTAAGGGAGTAGGAAAGGCATTCATCATAGCTTTTCGCTCCGGTGCAGTCATGGGGTTTCTTCTGGCTGCCAATGGCCTTCTTGTCTTGTATCTCTCCATCAATTTGTTTAAGCTCTATTATGGTGATGATTGGGAGGGCCTTTATGAATCCATCACTGGTTATGGACTCGGAGGTTCGTCAATGGCGCTCTTCGGGCGAGTCGGTGGAGGCATTTACACAAAGGCAGCAGATGTCGGTGCTGACCTTGTCGGTAAAGTCGAACGTAATATCCCCGAAGATGATCCTCGAAACCCAGCCGTCATAGCTGACAATGTGGGTGACAATGTGGGAGATATAGCAGGCATGGGCTCGGATCTGTTCGGATCCTATGCTGAATCAACCTGTGCAGCTCTATTCGTCGCATCGATATCGTCGTTTGGCATCACTCATGACTATACAGCCATGTCCTATCCTCTCATCGTCAGCTCGGTAGGCATCATAGTTTGCTTGATAACGACCCTTTTCGCTACCGATCTCTCTGAGATCAAGAACGTGGGTGAGATCGAACCGACGTTGAAGAGGCAACTTCTTATCTCGACTGTCTTGATGACCGCTGGGATTGGCTTGGTCAGTTTCTTTGCCTTGCCATCAGAATTCACCCTCTACAACTTCGGGAATGATAAGACTGTTAAAAACTGGTATCTGTTCTTCTGCGTTTCAATCGGTTTGTGGGCTGGACTTGTTATTGGGTACACAACAGAGTATTATACCAGTAACGCTTACAGCCCTGTGCAGGATGTGGCTGATTCGTGCCGGACTGGAGCTGCAACTAATGTGATCTTTGGATTGGCTTTGGGTTATAAGTCTGTGATCATTCCCATATTTGCTATTGCTGTTGCCATTTATGTGAGCTTCAGCTTGGCTGCCATGTATGGAATCGCTGTTGCTGCCTTGGGAATGCTTAGCACCATTGCCACAGGCCTTGCCATTGATGCTTATGGTCCGATTAGTGATAATGCCGGTGGAATTGCTGAAATGGCCGGAATGAGCCACGAGATTCGCGAGAGAACTGATGCTTTGGATGCTGCTGGAAACACTACTGCAGCCATCGGCAAGGGCTTTGCCATCGGATCTGCTGTAGCCATCTCTGCGTCGAACACGGGCGGGGCATGGGACAACGCGAAGAAATACATAGAGGCCGGAGGAAACGAACACGCGAAGTCACTGGGACCGAAGGGGTCGGCGGCGCACAAGGCGGCGGTGATCGGAGACACGATCGGAGACCCTCTGAAGGACACGTCGGGGCCGTCGCTGAACATTCTGATAAAGCTGATGGCGGTGGAGTCGTTAGTATTTGCGCCCTTCTTTGCGGCTCACGGTGGGCTCATCTTCAAGATTCTGGGCTGA 1899 49.71 MGVFNEGMTQFLVPAAALLGIGFALFQWFLVSKVKVSNGYGIDDDYKDRLIEGGEEEEGVDKLEVAVKCAEIQNAISVGATSFLFTEYRYLGIFMAAFGAVIFFFLGSVKGFSTKSEPCTYNTGNMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTTLEARKGVGKAFIIAFRSGAVMGFLLAANGLLVLYLSINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGITHDYTAMSYPLIVSSVGIIVCLITTLFATDLSEIKNVGEIEPTLKRQLLISTVLMTAGIGLVSFFALPSEFTLYNFGNDKTVKNWYLFFCVSIGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAVAISASNTGGAWDNAKKYIEAGGNEHAKSLGPKGSAAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKILG 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5806100 5809202 + Bda010228.1 Bda12g00465 17480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00465 632 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 544 631 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 543 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 544 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 PIRSF H+-PPtase 543 629 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 PIRSF H+-PPtase 8 545 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 Pfam Inorganic H+ pyrophosphatase 22 544 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 Pfam Inorganic H+ pyrophosphatase 544 616 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda12g00465 632 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 544 631 - -
Bda12g00465 632 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 544 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00465 Bda-Chr12:5806100 Bda13g00921 Bda-Chr13:10916979 8.74E-17 dispersed
Bda12g00465 Bda-Chr12:5806100 Bda12g00439 Bda-Chr12:5393314 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00465 K23025 - tcc:18600564 961.444