Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00503 ATGGAAGAATATTCTCTCCCGGTGGATAGTGATCAAAAGGCCACTGTATTCCGGCCATTTTCCATTGCTGCACCTCACATGCGAGCTTTCCACCTTGCATGGCTGTCTCTCTTCTCCTGCTTCTTCTCAACTTTTTCCATCCCTCCTCTCGTCCCCGTCATTCGGGACAACCTGAACCTCACCGACTCTGACCTCAGCGCCGCCGGCGTCGCCGCCTTTATAGGCTCCATCTTCTCCCGCCTCGCTATGGGACCCACGTGTGACCTCGTCGGCCCGCGCGTCGCCTCCGCCGCCCTCTCTCTCCTCACCGCCCCGGCGATTCTCGCCACCTCTCTCGCCTCCACGCCGCTTTCCTTCATCCTTGTCCGCTTCCTCGTTGGTTTTTCCCTCGCAAACTTCGTCGCTAACCAGTTCTGGATGAGCTCAATGTTCTCGAGCAACGTCGTTGGGCTTGCTAACGGCGTCTCCGCCGGGTGGGCGAACGCCGGCTCCGGCGTAACCCAACTCGTCATGCCGCAAATATACAATCTAATCATCTTCTTCAACGTCCCCTCTTTCACCGCCTGGCGATTTGCTTTCATTTTTCCTGCAATATTCCAAGCAGTTACAGCCATAATGGTCTTATCCTTCGGCCAAGATTTACCTTCAGGAAACTACAACAGCTCAAGAGAAGTATCAAAAGAGAGGGTTTCAAAAATTCTCTTCAACGGCCTGAAGAATTACAGAGCCTGGATTTTGGCTCTAACTTATGGGTTTTCCTTCGGGGTAGAGCTGACAACTGATAACATAATAGCGCAGTACTTTTACGACAGATTCGAGGTGAATCTTCAAACAGCTGGGACGGTGGCAGCAAGCTTTGGGATGGCGAACTTGTTTTCTCGTCCGCTGGGTGGGTTTGCGTCGGACAAGATGGGGCGGAGATACGGGATAAGAGGGCGGCTGTGGGCGCTGTGGGTGGTTCAGACGGTGGGGGGATTGCTTTGTGTGATGCTTGGCAGAGCAAGCGCGCTTTGGAGTTCGATTACAGTGATGTGTTTCTTCTCTGTCTTTGTTCAAGCTGCCGCTGGCCTGACCTTTGGTGTTGTTCCATTTGTTTCAAAAAGGTCCCTAGGAGTGGTGTCGGGGATGACAGGATGCGGAGGGACGGTAGGAGCAGTGGCGACGCAGCTGCTTCTGTTTACAGGGTCTAAACACTCGAAGCAAACAAGCATTTCACTAATGGGTGTGCTGATGATCCTCTGCACTCTGCCGCTTTGCTCGGTCTACTTCCCTGGATGGGGTGGCATGTTCTGTGGCCCTACTCATCCTCCCCCTCTTCTTACCCAACACTATCCCCTTCTTCACTAA 1347 53.38 MEEYSLPVDSDQKATVFRPFSIAAPHMRAFHLAWLSLFSCFFSTFSIPPLVPVIRDNLNLTDSDLSAAGVAAFIGSIFSRLAMGPTCDLVGPRVASAALSLLTAPAILATSLASTPLSFILVRFLVGFSLANFVANQFWMSSMFSSNVVGLANGVSAGWANAGSGVTQLVMPQIYNLIIFFNVPSFTAWRFAFIFPAIFQAVTAIMVLSFGQDLPSGNYNSSREVSKERVSKILFNGLKNYRAWILALTYGFSFGVELTTDNIIAQYFYDRFEVNLQTAGTVAASFGMANLFSRPLGGFASDKMGRRYGIRGRLWALWVVQTVGGLLCVMLGRASALWSSITVMCFFSVFVQAAAGLTFGVVPFVSKRSLGVVSGMTGCGGTVGAVATQLLLFTGSKHSKQTSISLMGVLMILCTLPLCSVYFPGWGGMFCGPTHPPPLLTQHYPLLH 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7091760 7093877 - Bda010287.1 Bda12g00503 17518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00503 448 Gene3D MFS general substrate transporter like domains 24 219 IPR036259 -
Bda12g00503 448 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 435 IPR044772 GO:0015112
Bda12g00503 448 SUPERFAMILY MFS general substrate transporter 24 418 IPR036259 -
Bda12g00503 448 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 420 IPR020846 GO:0022857
Bda12g00503 448 CDD MFS_NRT2_like 30 420 IPR044772 GO:0015112
Bda12g00503 448 Gene3D MFS general substrate transporter like domains 227 425 IPR036259 -
Bda12g00503 448 ProSitePatterns Sugar transport proteins signature 1. 297 312 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bda12g00503 448 Pfam Major Facilitator Superfamily 34 386 IPR011701 GO:0022857|GO:0055085
Bda12g00503 448 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 3 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00503 Bda-Chr12:7091760 Bda10g01035 Bda-Chr10:44440754 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00503 K02575 - jre:109021642 642.884