Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00525 | ATGTCAATGTCACAACAAGGCTGTGCCATCGAGCTTTACTTCGATCCCGCCCTCGAAAATCAGGTGTTGAAGGCTTGGAATGTACTAGCTCGCCGTCAAATCAGTACTCAGCTCATCGAAATCGAATCCCGCCCTCACATCACCCTCTTCTCCACCCCCTTCCTCGAGCCTGTGAAGCTTGAACCAATTCTCAAAACCTTGGCCTCCAAGCAAGAACCCTTGCCTCTTTCTTTCTCTTCAATCGGAAGTCTCCCAAGCGATAGCAATGTTCTTTTTCTCGGTCCCACGCCTTCGATTTCGCTTCTTCAGCTTCAGTCTCAGTTGTGCGAAGCATTGAGGAAAGAAGGAATCGAAATTGGGGAAGAATATCGGCTCGATTCTTGGATTCCATATTGTGCCGTTGCCGAAGAGGTACCTAAAGTTCGGATGGCGGAGGCCTTTTCTGTTATTCGGGACCTGAAATTGCCGGTTTCCGGATACGCCATGGACATTGGATTGGTGGAGTTTTCTCCAGTTCGTGAACTCTTCTCCGTTGCGCTCGGCAGCCCCATAGAGCCCCGAGACGGGGAATTATTGCTTCCTTAG | 585 | 50.09 | MSMSQQGCAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPVKLEPILKTLASKQEPLPLSFSSIGSLPSDSNVLFLGPTPSISLLQLQSQLCEALRKEGIEIGEEYRLDSWIPYCAVAEEVPKVRMAEAFSVIRDLKLPVSGYAMDIGLVEFSPVRELFSVALGSPIEPRDGELLLP | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 8147364 | 8148632 | - | Bda010322.1 | Bda12g00525 | 17540 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00525 | 194 | Pfam | 2'-5' RNA ligase superfamily | 44 | 159 | - | - | |
Bda12g00525 | 194 | Gene3D | Cyclic phosphodiesterase | 8 | 180 | - | - | |
Bda12g00525 | 194 | SUPERFAMILY | LigT-like | 3 | 161 | IPR009097 | - | |
Bda12g00525 | 194 | PANTHER | - | 6 | 183 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00525 | Bda-Chr12:8147364 | Bda14g01146 | Bda-Chr14:10632759 | 4.59E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00525 | - | - | csv:101208638 | 296.204 |