Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00525 ATGTCAATGTCACAACAAGGCTGTGCCATCGAGCTTTACTTCGATCCCGCCCTCGAAAATCAGGTGTTGAAGGCTTGGAATGTACTAGCTCGCCGTCAAATCAGTACTCAGCTCATCGAAATCGAATCCCGCCCTCACATCACCCTCTTCTCCACCCCCTTCCTCGAGCCTGTGAAGCTTGAACCAATTCTCAAAACCTTGGCCTCCAAGCAAGAACCCTTGCCTCTTTCTTTCTCTTCAATCGGAAGTCTCCCAAGCGATAGCAATGTTCTTTTTCTCGGTCCCACGCCTTCGATTTCGCTTCTTCAGCTTCAGTCTCAGTTGTGCGAAGCATTGAGGAAAGAAGGAATCGAAATTGGGGAAGAATATCGGCTCGATTCTTGGATTCCATATTGTGCCGTTGCCGAAGAGGTACCTAAAGTTCGGATGGCGGAGGCCTTTTCTGTTATTCGGGACCTGAAATTGCCGGTTTCCGGATACGCCATGGACATTGGATTGGTGGAGTTTTCTCCAGTTCGTGAACTCTTCTCCGTTGCGCTCGGCAGCCCCATAGAGCCCCGAGACGGGGAATTATTGCTTCCTTAG 585 50.09 MSMSQQGCAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPVKLEPILKTLASKQEPLPLSFSSIGSLPSDSNVLFLGPTPSISLLQLQSQLCEALRKEGIEIGEEYRLDSWIPYCAVAEEVPKVRMAEAFSVIRDLKLPVSGYAMDIGLVEFSPVRELFSVALGSPIEPRDGELLLP 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8147364 8148632 - Bda010322.1 Bda12g00525 17540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00525 194 Pfam 2'-5' RNA ligase superfamily 44 159 - -
Bda12g00525 194 Gene3D Cyclic phosphodiesterase 8 180 - -
Bda12g00525 194 SUPERFAMILY LigT-like 3 161 IPR009097 -
Bda12g00525 194 PANTHER - 6 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00525 Bda-Chr12:8147364 Bda14g01146 Bda-Chr14:10632759 4.59E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00525 - - csv:101208638 296.204