Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00542 ATGAAGATCTACTCCTACTTCTTCGTCTGCTCCGCTTTATTTCTTCTGTATTTCGCTTCTTCTTGTACAGGGGCAGATGAGGACGACGTGAGGTGCCTTCAGGGGATTAAGAATTCGTTCAACGATCCTCAGGGAACTCTTAGCTTATGGAACTTCGCCAACAATACCGTTGGTTTCATCTGCAATTTCGTCGGGGTTACCTGCTGGAACGATCGCGAGAATCGTGTAATTACTCTGGAACTGCGGGGCATGAAGCTGTCCGGCTTGATTCCGACGGATTTTCAGTATTGTACAAACCTGCAAAACTTGTATCTTTCCGATAACGATTTCTCGGGCTCGATTCCATCTGAGATTTGCTCGTGGTTGATGTTCTTGGTGACTCTGGATTTGTCAAACAATGGTTTTTCAGGCTCCATTCCTCCCGATCTAGCCAAGTGTTCCTATTTGAACAAGTTGATTTTGTCGGGTAATCGTCTGTCGGGCTCAATTCCTTACGAATTTTCTGGTCTGAGTCGGCTTAATAAGTTTTCTGTGGCGAATAACGAACTTAGTGGAGCTATTCCTTCGTTTTTCTCCAAGTTTGGGAAGGCTGATTTTGAAGGGAATAGCGGCCTTTGTGGGGAGCCTCTTGGAACAAAGTGTGGTGGTTTGAGCACGAAGAATCTCGCCATAATTATCGCAGCTGGAGTGTTTGGCGCTGCTGCTTCTTTGCTGCTTGGTTTTGGGCTATGGTGGTGGTGCCATTTGAGGTCAAGCAAGAGGAAGAAGGGGAGATTTGGGACTGGAAGAGATGATGACTGGGCTGAAAGATTGAGGGCTTATAAGCTTGTTCAAGTTTCATTGTTTCAGAAACCTTTAGTCAAAGTTAAGTTAGCTGATTTAATGGCAGCAACAAAAAATTTCAGCTCGGAAAACATCATTGTTTCAACCAGAACAGGAACTACTTATAAGGCAATTCTTCCTGATGGATCTGCCCTGGCGATCAAGCGTCTCAGCACTTGTAAGTTCAGCGAGAGGCAGTTTCAAGTGGAGATGAACAGATTAGGACAGATAAAGCACCCAAATTTGACACCCCTTTTGGGGTTTTGTCTTGTGGAAGATGAAAAGCTGTTAGTTTATAAGCATATGTCAAATGGGACACTCTACTCTCTGTTGCATACAACCAATACTTCGTTGGACTGGCCAACGCGATTTAGGATTGGCATTGGAGCGGCGAGGGGACTTTGCTGGCTCCACCATGGATGCCAACCTCCATATATGCATCAAAATATATGCTCCAGTGTGATTCTCATAGATGAAGAGTATGATGCAAGAATTATGGATTATGGGTTGGCAAAATTAATGGCTACTGATTCAATTGAGAGTAGCTTTGTCACGGGAGACTTGGGAGAACTCGGCTATGTTGCCCCGGAATACCCGAGTACTTTGGTTGCATCGCTTAAAGGAGATGTCTATGGATTTGGAGTGGTTCTTTTAGAGTTGGTGACTGGGCAAAAACCTCTAGAAGTGAGCAATGGGGAGGAAGGATATAAGGGTAATCTGGTGGATTGGGTCAATCAGCTTATTTCTTTGGGTCAGATTAAGGATTGCATCGACAAAAATCTTTGTGGGAAGGGGAATGAGGAGGAAATTTTACAGTTTCTGAAAATCGCTTGTAATTGCGTGGTTTCTCAACCCAAGGAAAGGTGGTCGATGGACCGGGTTTATCAGGCATTGAGGAGTATGGCTAGAGGATGTAGTTTCTCTGAGCTGGACGATGAATTTCCGATGCCGTTTGGAAGGTGA 1785 44.71 MKIYSYFFVCSALFLLYFASSCTGADEDDVRCLQGIKNSFNDPQGTLSLWNFANNTVGFICNFVGVTCWNDRENRVITLELRGMKLSGLIPTDFQYCTNLQNLYLSDNDFSGSIPSEICSWLMFLVTLDLSNNGFSGSIPPDLAKCSYLNKLILSGNRLSGSIPYEFSGLSRLNKFSVANNELSGAIPSFFSKFGKADFEGNSGLCGEPLGTKCGGLSTKNLAIIIAAGVFGAAASLLLGFGLWWWCHLRSSKRKKGRFGTGRDDDWAERLRAYKLVQVSLFQKPLVKVKLADLMAATKNFSSENIIVSTRTGTTYKAILPDGSALAIKRLSTCKFSERQFQVEMNRLGQIKHPNLTPLLGFCLVEDEKLLVYKHMSNGTLYSLLHTTNTSLDWPTRFRIGIGAARGLCWLHHGCQPPYMHQNICSSVILIDEEYDARIMDYGLAKLMATDSIESSFVTGDLGELGYVAPEYPSTLVASLKGDVYGFGVVLLELVTGQKPLEVSNGEEGYKGNLVDWVNQLISLGQIKDCIDKNLCGKGNEEEILQFLKIACNCVVSQPKERWSMDRVYQALRSMARGCSFSELDDEFPMPFGR 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8656617 8658401 - Bda010344.1 Bda12g00542 17557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00542 594 Gene3D Ribonuclease Inhibitor 26 216 IPR032675 -
Bda12g00542 594 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 23 591 - -
Bda12g00542 594 Gene3D Transferase(Phosphotransferase) domain 1 376 586 - -
Bda12g00542 594 ProSiteProfiles Protein kinase domain profile. 301 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00542 594 SUPERFAMILY Protein kinase-like (PK-like) 278 572 IPR011009 -
Bda12g00542 594 SUPERFAMILY L domain-like 26 202 - -
Bda12g00542 594 Gene3D Phosphorylase Kinase; domain 1 262 375 - -
Bda12g00542 594 Pfam Protein tyrosine and serine/threonine kinase 323 570 IPR001245 GO:0004672|GO:0006468
Bda12g00542 594 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Bda12g00542 594 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bda12g00542 594 PANTHER RECEPTOR-LIKE PROTEIN 55 23 591 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00542 Bda-Chr12:8656617 Bda14g01141 Bda-Chr14:10578947 0 dispersed
Bda13g01671 Bda-Chr13:40122722 Bda12g00542 Bda-Chr12:8656617 9.78E-91 dispersed
Bda12g00542 Bda-Chr12:8656617 Bda12g00544 Bda-Chr12:8697825 1.41E-146 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69967 PF07714 PK_Tyr_Ser-Thr 6.20E-27 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00542 - - csv:101209638 857.825