Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00551 ATGGCTGCCAATGCGGAAGTTAATGAGTTCATATTCCGGTCAAAACTCCCCGATATTCACATCCCGAACGATCTCCCTCTGCATGCTTTCTGCTTCGAGAAAATATCAGAGGTTGGCTCTCGGCCGTGTCTGATCAATGGCTCTACCGGAGATATATTCACGTACGATGATGTTCGGCTAATGGCTAGAAAAGTGGCGGTGGGGCTTAAAAGCCTCGGCGTCGGAAAAGGCGACGTTATCATGCTTTTGCTTCCCAACTCCCCGGAGTTTGTGTTTTCCTTCCTTGGCGCTTCTTACGGTGGAGCTATAATGACCGCTGCAAATCCTTTTTTCACTGCAGCGGAGATTGCCAAGCAAGCTAAAGCTTCAAAAGCAAAGGTCATTATAACCCAAGCTTGCTATTACGAGAAAGTGAAAGAAATCATCTGCACCGACGCACCTCCGGAAGGGTGTTTACATTTCTCCGAGCTCACTAAGTCCGACGAGGAAAACACTCCGGTGGTGGAAATATGCCCAGACGACGTCGTAGCGCTTCCGTATTCATCTGGAACTACTGGATTGCCCAAAGGTGTGATGTTGACCCATAAAGGGCTAGTGACGAGCGTAAGTCAACAGGTCGACGGAGACAATCCGAACCTGCACTACGGAAGAGACGACGTCATTCTCTGTGTTTTACCTCTCTTCCACATATATTCTCTCAACTCCGTTCTGCTCTGCGCGTTGAGATCGGGAGCTGCGATCTTGATAATGCAGAAGTTTGAGATCAAATGCCTGCTGAATTTGATTCAGAAGTATAAGGTTTCGGTGGCACCGATCGTGCCGCCGATTGTTTTGGCAATAGCAAAGTCGCCGGAGCTCGAGAACTACGATCTTTCGTCGATAAGGGTGCTGAAATCGGGCGGCGCCCCGGGTTACGGAATGACAGAGGCAGGTCCAGTTCTAACAATGAGCCTAGCCTTCGCCAAGTACCCATCACCAGTAAAGCCAGGAGCATGCGGTACTGTCATCCGGAACGCCGAGCTGAAGATTCTTGACATAGAAACCGGCGCATCTCTGCCGCGCAACGCCCGTGGAGAGATCTGTATCAGAGGAGATCAGGTCATGAAAGGCTACCTGAACGACCCAGAAGCCACCGACAGGACCATCGACAAACAAGGCTGGCTTCACACCGGCGACATAGGGTTCATCGACGACGACGACGAGCTCTTCATAGTCGACAGACTAAAGGAGCTGATCAAATACAAAGGGTTTCAGGTGGCTCCGGCGGAGATTGAGGCCATTCTGCTCACTCACCCTCGAGTCTCCGACGCTGCCGTCGTACCAATGAAAGATGAACAAGCTGGAGAGGTTCCTGTTGCATTTGTAGTGACAGCAAAGAATTGCGAGCTCACTGAAGATGAAGTGGTTTTCTACAAGAGACTGAACAGAGTATTCTTCATTGACGCGATTCCCAAGGCGCCATCTGGCAAGATCTTGAGGAAAAACTTGAAAGCTATTTTAGCTAATGGCCTACCCAATTAG 1521 50.03 MAANAEVNEFIFRSKLPDIHIPNDLPLHAFCFEKISEVGSRPCLINGSTGDIFTYDDVRLMARKVAVGLKSLGVGKGDVIMLLLPNSPEFVFSFLGASYGGAIMTAANPFFTAAEIAKQAKASKAKVIITQACYYEKVKEIICTDAPPEGCLHFSELTKSDEENTPVVEICPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVSQQVDGDNPNLHYGRDDVILCVLPLFHIYSLNSVLLCALRSGAAILIMQKFEIKCLLNLIQKYKVSVAPIVPPIVLAIAKSPELENYDLSSIRVLKSGGAPGYGMTEAGPVLTMSLAFAKYPSPVKPGACGTVIRNAELKILDIETGASLPRNARGEICIRGDQVMKGYLNDPEATDRTIDKQGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAEIEAILLTHPRVSDAAVVPMKDEQAGEVPVAFVVTAKNCELTEDEVVFYKRLNRVFFIDAIPKAPSGKILRKNLKAILANGLPN 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9109960 9112901 - Bda010367.1 Bda12g00551 17566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00551 506 CDD 4CL 21 496 - -
Bda12g00551 506 Pfam AMP-binding enzyme 39 303 IPR000873 -
Bda12g00551 506 Pfam AMP-binding enzyme 304 414 IPR000873 -
Bda12g00551 506 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 303 - -
Bda12g00551 506 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 304 500 - -
Bda12g00551 506 Gene3D - 409 503 IPR045851 -
Bda12g00551 506 Pfam AMP-binding enzyme C-terminal domain 423 490 IPR025110 -
Bda12g00551 506 SUPERFAMILY Acetyl-CoA synthetase-like 7 503 - -
Bda12g00551 506 ProSitePatterns Putative AMP-binding domain signature. 178 189 IPR020845 -
Bda12g00551 506 Gene3D - 5 408 IPR042099 -
Bda12g00551 506 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 303 - -
Bda12g00551 506 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 304 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00249 Bda-Chr5:42387458 Bda12g00551 Bda-Chr12:9109960 0 dispersed
Bda10g00754 Bda-Chr10:41951047 Bda12g00551 Bda-Chr12:9109960 2.55E-151 dispersed
Bda12g00551 Bda-Chr12:9109960 Bda03g01713 Bda-Chr3:56597464 1.49E-113 dispersed
Bda12g00551 Bda-Chr12:9109960 Bda04g00768 Bda-Chr4:57173261 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00551 K01904 - jre:108986343 783.097